RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ZC3H4Q9UPT8 1303 aaKnown RBP13.62□□□□□ -0.23
CTCFL-221ENST00000608903 PRAMEF18Q5VWM3 479 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 NECAB1Q8N987 351 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 MKNK2Q9HBH9 465 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 AKR1B1P15121 316 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 EVCP57679 992 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 RCSD1Q6JBY9 416 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 RAB11FIP4Q86YS3 637 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 ENAHQ8N8S7 591 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-221ENST00000608903 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 GGA3Q9NZ52 723 aa13.61□□□□□ -0.23
CTCFL-221ENST00000608903 IFIT3O14879 490 aaKnown RBP13.6□□□□□ -0.23
CTCFL-221ENST00000608903 HLA-DOAP06340 250 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 LMOD1P29536 600 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-221ENST00000608903 MCM2P49736 904 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 CUL4AQ13619 759 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 TMEM67Q5HYA8 995 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 FOXP4Q8IVH2 680 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-221ENST00000608903 TMEM87BQ96K49 555 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 ZSCAN10Q96SZ4 725 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-221ENST00000608903 DEFB129Q9H1M3 183 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 HPS5Q9UPZ3 1129 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 WDR90Q96KV7 1748 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 TNKSO95271 1327 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 PDIA3P30101 505 aaKnown RBP13.6□□□□□ -0.23
CTCFL-221ENST00000608903 EPHX2P34913 555 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 TATDN1Q6P1N9 297 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 MIGA2Q7L4E1 593 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 ZNF444Q8N0Y2 327 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-221ENST00000608903 ANGEL1Q9UNK9 670 aaKnown RBP13.6□□□□□ -0.23
CTCFL-221ENST00000608903 MYH8P13535 1937 aa13.6□□□□□ -0.23
CTCFL-221ENST00000608903 TSPY2A6NKD2 308 aa13.59□□□□□ -0.23
CTCFL-221ENST00000608903 MAP3K10Q02779 954 aa13.59□□□□□ -0.23
CTCFL-221ENST00000608903 STK3Q13188 491 aa13.59□□□□□ -0.23
CTCFL-221ENST00000608903 ANKRD1Q15327 319 aa13.59□□□□□ -0.23
CTCFL-221ENST00000608903 NBPF12Q5TAG4 269 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-221ENST00000608903 CLEC10AQ8IUN9 316 aa13.59□□□□□ -0.23
CTCFL-221ENST00000608903 IL27Q8NEV9 243 aa13.59□□□□□ -0.23
CTCFL-221ENST00000608903 NEDD1Q8NHV4 660 aa13.59□□□□□ -0.23
CTCFL-221ENST00000608903 TAF1DQ9H5J8 278 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-221ENST00000608903 SWAP70Q9UH65 585 aa13.59□□□□□ -0.23
CTCFL-221ENST00000608903 GREB1LQ9C091 1923 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-221ENST00000608903 IGKV6D-41A0A0C4DH26 115 aa13.58□□□□□ -0.23
CTCFL-221ENST00000608903 LIFRP42702 1097 aa13.58□□□□□ -0.23
CTCFL-221ENST00000608903 FGD1P98174 961 aa13.58□□□□□ -0.23
CTCFL-221ENST00000608903 MYL10Q9BUA6 226 aa13.58□□□□□ -0.23
CTCFL-221ENST00000608903 SCN4AP35499 1836 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 KLF18A0A0U1RQI7 1052 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 POTEJP0CG39 1038 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 RXRAP19793 462 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 SCRN1Q12765 414 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 CCDC83Q8IWF9 413 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-221ENST00000608903 MTA3Q9BTC8 594 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 NCOA5Q9HCD5 579 aaKnown RBP13.58□□□□□ -0.24
CTCFL-221ENST00000608903 TCP11L1Q9NUJ3 509 aa13.58□□□□□ -0.24
CTCFL-221ENST00000608903 PFKFB2O60825 505 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 TSPY3P0CV98 308 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 TSPY8P0CW00 308 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 NOVP48745 357 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 CCT2P78371 535 aaKnown RBP13.57□□□□□ -0.24
CTCFL-221ENST00000608903 WTAPQ15007 396 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 ZSCAN31Q96LW9 406 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-221ENST00000608903 UBAC1Q9BSL1 405 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTCFL-221ENST00000608903 FAM217BQ9NTX9 383 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-221ENST00000608903 FZD1Q9UP38 647 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 SSC5DA1L4H1 1573 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 TBC1D12O60347 775 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 GDF11O95390 407 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 TNNI2P48788 182 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 APOA5Q6Q788 366 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 USP50Q70EL3 339 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-221ENST00000608903 SIAH1Q8IUQ4 282 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 ANKS1AQ92625 1134 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 ZNF274Q96GC6 653 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-221ENST00000608903 CEP95Q96GE4 821 aa13.57□□□□□ -0.24
CTCFL-221ENST00000608903 PLIN4Q96Q06 1357 aa13.56□□□□□ -0.24
CTCFL-221ENST00000608903 PHF20L1A8MW92 1017 aa13.56□□□□□ -0.24
CTCFL-221ENST00000608903 ADM5C9JUS6 153 aa13.56□□□□□ -0.24
CTCFL-221ENST00000608903 CTDNEP1O95476 244 aa13.56□□□□□ -0.24
CTCFL-221ENST00000608903 DDIT3P35638 169 aa13.56□□□□□ -0.24
CTCFL-221ENST00000608903 TNFAIP1Q13829 316 aa13.56□□□□□ -0.24
CTCFL-221ENST00000608903 GSE1Q14687 1217 aa13.56□□□□□ -0.24
CTCFL-221ENST00000608903 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-221ENST00000608903 IQCA1Q86XH1 822 aa13.56□□□□□ -0.24
CTCFL-221ENST00000608903 APOBEC3FQ8IUX4 373 aaKnown RBP13.56□□□□□ -0.24
CTCFL-221ENST00000608903 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
CTCFL-221ENST00000608903 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-221ENST00000608903 CDC27P30260 824 aa13.55□□□□□ -0.24
CTCFL-221ENST00000608903 GTF3C6Q969F1 213 aa13.55□□□□□ -0.24
CTCFL-221ENST00000608903 RRAGCQ9HB90 399 aa13.55□□□□□ -0.24
CTCFL-221ENST00000608903 SH2B1Q9NRF2 756 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-221ENST00000608903 HERC5Q9UII4 1024 aaKnown RBP13.55□□□□□ -0.24
CTCFL-221ENST00000608903 NAP1L2Q9ULW6 460 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-221ENST00000608903 PITPNM2Q9BZ72 1349 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms