RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 ADAM30Q9UKF2 790 aa9.72□□□□□ -0.85
LINC00343-211ENST00000608426 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
LINC00343-211ENST00000608426 CD97P48960 835 aa9.71□□□□□ -0.86
LINC00343-211ENST00000608426 LRP8Q14114 963 aa9.71□□□□□ -0.86
LINC00343-211ENST00000608426 SEZ6Q53EL9 994 aa9.71□□□□□ -0.86
LINC00343-211ENST00000608426 SLC6A19Q695T7 634 aa9.71□□□□□ -0.86
LINC00343-211ENST00000608426 MRPL41Q8IXM3 137 aaKnown RBP9.71□□□□□ -0.86
LINC00343-211ENST00000608426 MFSD2AQ8NA29 543 aa9.71□□□□□ -0.86
LINC00343-211ENST00000608426 PCMTD2Q9NV79 361 aa9.71□□□□□ -0.86
LINC00343-211ENST00000608426 REV1Q9UBZ9 1251 aa9.71□□□□□ -0.86
LINC00343-211ENST00000608426 HTR3BO95264 441 aa9.7□□□□□ -0.86
LINC00343-211ENST00000608426 MED26O95402 600 aa9.7□□□□□ -0.86
LINC00343-211ENST00000608426 ARHGAP27Q6ZUM4 889 aa9.7□□□□□ -0.86
LINC00343-211ENST00000608426 MCATQ8IVS2 390 aaKnown RBP9.7□□□□□ -0.86
LINC00343-211ENST00000608426 ZNF654Q8IZM8 581 aa9.7□□□□□ -0.86
LINC00343-211ENST00000608426 FAM13CQ8NE31 585 aa9.7□□□□□ -0.86
LINC00343-211ENST00000608426 NKD1Q969G9 470 aa9.7□□□□□ -0.86
LINC00343-211ENST00000608426 EAF1Q96JC9 268 aaPredicted RBP9.7□□□□□ -0.86
LINC00343-211ENST00000608426 NT5C1AQ9BXI3 368 aa9.7□□□□□ -0.86
LINC00343-211ENST00000608426 KLHL3Q9UH77 587 aa9.7□□□□□ -0.86
LINC00343-211ENST00000608426 SLITRK5O94991 958 aa9.69□□□□□ -0.86
LINC00343-211ENST00000608426 MCM4P33991 863 aa9.69□□□□□ -0.86
LINC00343-211ENST00000608426 ARTNQ5T4W7 220 aa9.69□□□□□ -0.86
LINC00343-211ENST00000608426 FAM181AQ8N9Y4 354 aa9.69□□□□□ -0.86
LINC00343-211ENST00000608426 PCDHB14Q9Y5E9 798 aa9.69□□□□□ -0.86
LINC00343-211ENST00000608426 PRR36Q9H6K5 1346 aa9.68□□□□□ -0.86
LINC00343-211ENST00000608426 HYAL3O43820 417 aaPredicted RBP9.68□□□□□ -0.86
LINC00343-211ENST00000608426 TMEM201Q5SNT2 666 aa9.68□□□□□ -0.86
LINC00343-211ENST00000608426 ZC3H7BQ9UGR2 993 aaKnown RBP9.68□□□□□ -0.86
LINC00343-211ENST00000608426 GTF2IRD1Q9UHL9 959 aa9.68□□□□□ -0.86
LINC00343-211ENST00000608426 TPX2Q9ULW0 747 aaKnown RBP9.68□□□□□ -0.86
LINC00343-211ENST00000608426 UPK3BL1B0FP48 263 aa9.67□□□□□ -0.86
LINC00343-211ENST00000608426 UPK3BL2E5RIL1 263 aa9.67□□□□□ -0.86
LINC00343-211ENST00000608426 EOMESO95936 686 aa9.67□□□□□ -0.86
LINC00343-211ENST00000608426 YARSP54577 528 aaKnown RBP9.67□□□□□ -0.86
LINC00343-211ENST00000608426 LETMD1Q6P1Q0 360 aa9.67□□□□□ -0.86
LINC00343-211ENST00000608426 GK5Q6ZS86 529 aa9.67□□□□□ -0.86
LINC00343-211ENST00000608426 ZFP64Q9NPA5 681 aa9.67□□□□□ -0.86
LINC00343-211ENST00000608426 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.67□□□□□ -0.86
LINC00343-211ENST00000608426 MLECQ14165 292 aa9.66□□□□□ -0.86
LINC00343-211ENST00000608426 RIN3Q8TB24 985 aa9.66□□□□□ -0.86
LINC00343-211ENST00000608426 HEXIM2Q96MH2 286 aaKnown RBP9.66□□□□□ -0.86
LINC00343-211ENST00000608426 PRDM5Q9NQX1 630 aaPredicted RBP9.66□□□□□ -0.86
LINC00343-211ENST00000608426 KIAA1324LA8MWY0 1029 aaPredicted RBP9.65□□□□□ -0.86
LINC00343-211ENST00000608426 TCF3P15923 654 aa9.65□□□□□ -0.86
LINC00343-211ENST00000608426 ITIH2P19823 946 aa9.65□□□□□ -0.86
LINC00343-211ENST00000608426 ZNF165P49910 485 aa9.65□□□□□ -0.86
LINC00343-211ENST00000608426 PAK2Q13177 524 aa9.65□□□□□ -0.86
LINC00343-211ENST00000608426 MSMPQ1L6U9 139 aa9.65□□□□□ -0.86
LINC00343-211ENST00000608426 SLITRK4Q8IW52 837 aa9.65□□□□□ -0.86
LINC00343-211ENST00000608426 Q8N3U1 123 aa9.65□□□□□ -0.86
LINC00343-211ENST00000608426 U3KQE9 123 aa9.65□□□□□ -0.86
LINC00343-211ENST00000608426 CHURC1-FNTBB4DL54 471 aa9.64□□□□□ -0.87
LINC00343-211ENST00000608426 E9PSI1 815 aa9.64□□□□□ -0.87
LINC00343-211ENST00000608426 SPINK2P20155 84 aa9.64□□□□□ -0.87
LINC00343-211ENST00000608426 CLCQ05315 142 aa9.64□□□□□ -0.87
LINC00343-211ENST00000608426 FAM214BQ7L5A3 538 aa9.64□□□□□ -0.87
LINC00343-211ENST00000608426 CDH24Q86UP0 819 aa9.64□□□□□ -0.87
LINC00343-211ENST00000608426 PLD6Q8N2A8 252 aaKnown RBP9.64□□□□□ -0.87
LINC00343-211ENST00000608426 DNAJA2O60884 412 aa9.63□□□□□ -0.87
LINC00343-211ENST00000608426 CEACAM5P06731 702 aa9.63□□□□□ -0.87
LINC00343-211ENST00000608426 OXCT1P55809 520 aa9.63□□□□□ -0.87
LINC00343-211ENST00000608426 ZNF746Q6NUN9 644 aaPredicted RBP9.63□□□□□ -0.87
LINC00343-211ENST00000608426 DTX1Q86Y01 620 aa9.63□□□□□ -0.87
LINC00343-211ENST00000608426 NETO1Q8TDF5 533 aa9.63□□□□□ -0.87
LINC00343-211ENST00000608426 TGIF2Q9GZN2 237 aa9.63□□□□□ -0.87
LINC00343-211ENST00000608426 CCSER2Q9H7U1 834 aa9.63□□□□□ -0.87
LINC00343-211ENST00000608426 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
LINC00343-211ENST00000608426 IGF2BP3O00425 579 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC00343-211ENST00000608426 ATE1O95260 518 aa9.62□□□□□ -0.87
LINC00343-211ENST00000608426 ERCC5P28715 1186 aaPredicted RBP9.62□□□□□ -0.87
LINC00343-211ENST00000608426 SFRP5Q5T4F7 317 aa9.62□□□□□ -0.87
LINC00343-211ENST00000608426 SLFN12Q8IYM2 578 aa9.62□□□□□ -0.87
LINC00343-211ENST00000608426 PHACTR4Q8IZ21 702 aa9.62□□□□□ -0.87
LINC00343-211ENST00000608426 REXO1Q8N1G1 1221 aaKnown RBP9.62□□□□□ -0.87
LINC00343-211ENST00000608426 CYB5D2Q8WUJ1 264 aa9.62□□□□□ -0.87
LINC00343-211ENST00000608426 EHMT1Q9H9B1 1298 aa9.62□□□□□ -0.87
LINC00343-211ENST00000608426 MKNK2Q9HBH9 465 aa9.62□□□□□ -0.87
LINC00343-211ENST00000608426 BSDC1Q9NW68 430 aaPredicted RBP9.62□□□□□ -0.87
LINC00343-211ENST00000608426 MAPK8IP1Q9UQF2 711 aa9.62□□□□□ -0.87
LINC00343-211ENST00000608426 RAD51AP2Q09MP3 1159 aa9.61□□□□□ -0.87
LINC00343-211ENST00000608426 ACBD3Q9H3P7 528 aa9.61□□□□□ -0.87
LINC00343-211ENST00000608426 CNTNAP4Q9C0A0 1308 aa9.6□□□□□ -0.87
LINC00343-211ENST00000608426 SLC22A31A6NKX4 558 aa9.6□□□□□ -0.87
LINC00343-211ENST00000608426 CYP7A1P22680 504 aa9.6□□□□□ -0.87
LINC00343-211ENST00000608426 ETV3P41162 512 aa9.6□□□□□ -0.87
LINC00343-211ENST00000608426 TNNI2P48788 182 aa9.6□□□□□ -0.87
LINC00343-211ENST00000608426 IFI16Q16666 785 aaKnown RBP9.6□□□□□ -0.87
LINC00343-211ENST00000608426 ARSHQ5FYA8 562 aa9.6□□□□□ -0.87
LINC00343-211ENST00000608426 NBPF11Q86T75 865 aa9.6□□□□□ -0.87
LINC00343-211ENST00000608426 GPRASP2Q96D09 838 aa9.6□□□□□ -0.87
LINC00343-211ENST00000608426 GMIPQ9P107 970 aa9.6□□□□□ -0.87
LINC00343-211ENST00000608426 ANGEL1Q9UNK9 670 aaKnown RBP9.6□□□□□ -0.87
LINC00343-211ENST00000608426 CBX7O95931 251 aa9.59□□□□□ -0.87
LINC00343-211ENST00000608426 OVOS1Q6IE37 1185 aa9.59□□□□□ -0.87
LINC00343-211ENST00000608426 DNAJB8Q8NHS0 232 aa9.59□□□□□ -0.87
LINC00343-211ENST00000608426 BAHD1Q8TBE0 780 aaPredicted RBP9.59□□□□□ -0.87
LINC00343-211ENST00000608426 CCDC74BQ96LY2 380 aa9.59□□□□□ -0.87
LINC00343-211ENST00000608426 FERD3LQ96RJ6 166 aa9.59□□□□□ -0.87
LINC00343-211ENST00000608426 KIF2CQ99661 725 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms