RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 DCP1AQ9NPI6 582 aaPredicted RBP17.46■□□□□ 0.39
HDDC2-204ENST00000608295 SERPINB13Q9UIV8 391 aa17.46■□□□□ 0.39
HDDC2-204ENST00000608295 TTC41PQ6P2S7 1318 aa17.46■□□□□ 0.38
HDDC2-204ENST00000608295 USP17L5A8MUK1 530 aa17.45■□□□□ 0.38
HDDC2-204ENST00000608295 ERC2O15083 957 aa17.45■□□□□ 0.38
HDDC2-204ENST00000608295 TLR2O60603 784 aa17.45■□□□□ 0.38
HDDC2-204ENST00000608295 SOX10P56693 466 aa17.45■□□□□ 0.38
HDDC2-204ENST00000608295 UBE3CQ15386 1083 aa17.45■□□□□ 0.38
HDDC2-204ENST00000608295 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
HDDC2-204ENST00000608295 ZNF280CQ8ND82 737 aa17.45■□□□□ 0.38
HDDC2-204ENST00000608295 DYNLL2Q96FJ2 89 aa17.45■□□□□ 0.38
HDDC2-204ENST00000608295 PARK7Q99497 189 aaKnown RBP17.45■□□□□ 0.38
HDDC2-204ENST00000608295 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
HDDC2-204ENST00000608295 M0R2C6 588 aa17.44■□□□□ 0.38
HDDC2-204ENST00000608295 MPHOSPH10O00566 681 aaKnown RBP17.44■□□□□ 0.38
HDDC2-204ENST00000608295 GLRX3O76003 335 aaKnown RBP17.44■□□□□ 0.38
HDDC2-204ENST00000608295 ASNSP08243 561 aa17.44■□□□□ 0.38
HDDC2-204ENST00000608295 RAB3GAP1Q15042 981 aa17.44■□□□□ 0.38
HDDC2-204ENST00000608295 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
HDDC2-204ENST00000608295 OSBP2Q969R2 916 aa17.44■□□□□ 0.38
HDDC2-204ENST00000608295 FEZ1Q99689 392 aa17.44■□□□□ 0.38
HDDC2-204ENST00000608295 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
HDDC2-204ENST00000608295 EFCC1Q9HA90 598 aa17.44■□□□□ 0.38
HDDC2-204ENST00000608295 AS3MTQ9HBK9 375 aa17.44■□□□□ 0.38
HDDC2-204ENST00000608295 SALL3Q9BXA9 1300 aa17.44■□□□□ 0.38
HDDC2-204ENST00000608295 MGAMO43451 1857 aa17.44■□□□□ 0.38
HDDC2-204ENST00000608295 SHMT1P34896 483 aa17.43■□□□□ 0.38
HDDC2-204ENST00000608295 TMED8Q6PL24 325 aaPredicted RBP17.43■□□□□ 0.38
HDDC2-204ENST00000608295 FASTKD5Q7L8L6 764 aaKnown RBP17.43■□□□□ 0.38
HDDC2-204ENST00000608295 CLEC10AQ8IUN9 316 aa17.43■□□□□ 0.38
HDDC2-204ENST00000608295 SMCR8Q8TEV9 937 aaPredicted RBP17.43■□□□□ 0.38
HDDC2-204ENST00000608295 APPBP2Q92624 585 aa17.43■□□□□ 0.38
HDDC2-204ENST00000608295 SEC62Q99442 399 aaKnown RBP17.43■□□□□ 0.38
HDDC2-204ENST00000608295 EHD4Q9H223 541 aa17.43■□□□□ 0.38
HDDC2-204ENST00000608295 ADGRA2Q96PE1 1338 aa17.43■□□□□ 0.38
HDDC2-204ENST00000608295 RNF113AO15541 343 aaKnown RBP17.42■□□□□ 0.38
HDDC2-204ENST00000608295 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
HDDC2-204ENST00000608295 FBXO46Q6PJ61 603 aaPredicted RBP17.42■□□□□ 0.38
HDDC2-204ENST00000608295 METTL16Q86W50 562 aaKnown RBP17.42■□□□□ 0.38
HDDC2-204ENST00000608295 ZCCHC17Q9NP64 241 aaKnown RBP17.42■□□□□ 0.38
HDDC2-204ENST00000608295 AGTPBP1Q9UPW5 1226 aa17.42■□□□□ 0.38
HDDC2-204ENST00000608295 USP17L12C9JPN9 530 aa17.41■□□□□ 0.38
HDDC2-204ENST00000608295 USP17L21D6R901 530 aa17.41■□□□□ 0.38
HDDC2-204ENST00000608295 GPAA1O43292 621 aa17.41■□□□□ 0.38
HDDC2-204ENST00000608295 MYCP01106 439 aaPredicted RBP17.41■□□□□ 0.38
HDDC2-204ENST00000608295 PDE1AP54750 535 aa17.41■□□□□ 0.38
HDDC2-204ENST00000608295 ABCB5Q2M3G0 1257 aa17.41■□□□□ 0.38
HDDC2-204ENST00000608295 CCDC129Q6ZRS4 1044 aa17.41■□□□□ 0.38
HDDC2-204ENST00000608295 DDRGK1Q96HY6 314 aa17.41■□□□□ 0.38
HDDC2-204ENST00000608295 PEX10O60683 326 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 APPP05067 770 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 CTGFP29279 349 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 LACTBP83111 547 aaPredicted RBP17.4■□□□□ 0.38
HDDC2-204ENST00000608295 KIF22Q14807 665 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 SEPT2Q15019 361 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 TATDN1Q6P1N9 297 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 C17orf99Q6UX52 265 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 SMC5Q8IY18 1101 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 AMOTL1Q8IY63 956 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 STRBPQ96SI9 672 aaKnown RBP17.4■□□□□ 0.38
HDDC2-204ENST00000608295 EPB41L4AQ9HCS5 686 aaPredicted RBP17.4■□□□□ 0.38
HDDC2-204ENST00000608295 TMOD4Q9NZQ9 345 aa17.4■□□□□ 0.38
HDDC2-204ENST00000608295 TDO2P48775 406 aa17.39■□□□□ 0.37
HDDC2-204ENST00000608295 GABPAQ06546 454 aa17.39■□□□□ 0.37
HDDC2-204ENST00000608295 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.37
HDDC2-204ENST00000608295 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
HDDC2-204ENST00000608295 CABP5Q9NP86 173 aa17.39■□□□□ 0.37
HDDC2-204ENST00000608295 ATP8A2Q9NTI2 1148 aa17.39■□□□□ 0.37
HDDC2-204ENST00000608295 PTCH2Q9Y6C5 1203 aa17.39■□□□□ 0.37
HDDC2-204ENST00000608295 MINDY4BA8MYZ0 360 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 TRIM6-TRIM34B2RNG4 842 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 USP17L10C9JJH3 530 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 FMNL1O95466 1100 aaPredicted RBP17.38■□□□□ 0.37
HDDC2-204ENST00000608295 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
HDDC2-204ENST00000608295 AKR1B1P15121 316 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 PSMC4P43686 418 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 BACE1P56817 501 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
HDDC2-204ENST00000608295 AAMPQ13685 434 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 PKN2Q16513 984 aaKnown RBP17.38■□□□□ 0.37
HDDC2-204ENST00000608295 CTR9Q6PD62 1173 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 CHD1LQ86WJ1 897 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 PROCA1Q8NCQ7 364 aaPredicted RBP17.38■□□□□ 0.37
HDDC2-204ENST00000608295 WDR18Q9BV38 432 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 PTPN22Q9Y2R2 807 aa17.38■□□□□ 0.37
HDDC2-204ENST00000608295 GSG1L2A8MUP6 293 aa17.37■□□□□ 0.37
HDDC2-204ENST00000608295 GUCY1A2P33402 732 aa17.37■□□□□ 0.37
HDDC2-204ENST00000608295 C12orf60Q5U649 245 aa17.37■□□□□ 0.37
HDDC2-204ENST00000608295 RILPL2Q969X0 211 aa17.37■□□□□ 0.37
HDDC2-204ENST00000608295 TRIM47Q96LD4 638 aa17.37■□□□□ 0.37
HDDC2-204ENST00000608295 TBC1D2Q9BYX2 928 aa17.37■□□□□ 0.37
HDDC2-204ENST00000608295 ASCC2Q9H1I8 757 aaPredicted RBP17.37■□□□□ 0.37
HDDC2-204ENST00000608295 PNMA3Q9UL41 463 aa17.37■□□□□ 0.37
HDDC2-204ENST00000608295 BCRP11274 1271 aa17.36■□□□□ 0.37
HDDC2-204ENST00000608295 CDK8P49336 464 aa17.36■□□□□ 0.37
HDDC2-204ENST00000608295 ATP2B2Q01814 1243 aa17.36■□□□□ 0.37
HDDC2-204ENST00000608295 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
HDDC2-204ENST00000608295 ARPP21Q9UBL0 812 aaPredicted RBP17.36■□□□□ 0.37
HDDC2-204ENST00000608295 STAP2Q9UGK3 403 aa17.36■□□□□ 0.37
HDDC2-204ENST00000608295 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms