RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 C8orf34Q49A92 452 aa5.96□□□□□ -1.45
SCARNA15-201ENST00000607520 SH3RF3Q8TEJ3 882 aaPredicted RBP5.96□□□□□ -1.45
SCARNA15-201ENST00000607520 LMO7Q8WWI1 1683 aa5.96□□□□□ -1.45
SCARNA15-201ENST00000607520 USP17L15C9J2P7 530 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 USP17L13C9JLJ4 530 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 USP17L11C9JVI0 530 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 USP17L18D6R9N7 530 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 USP17L22D6RA61 530 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 USP17L17D6RBQ6 530 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 USP17L19D6RCP7 530 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 USP17L20D6RJB6 530 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 WNT10BO00744 389 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 PRC1O43663 620 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 ABCB7O75027 752 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 TOP1P11387 765 aaKnown RBP5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 NAPAP54920 295 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 USP17L24Q0WX57 530 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 DACT2Q5SW24 774 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 AKNAD1Q5T1N1 836 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 CDC42EP5Q6NZY7 148 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 CCDC174Q6PII3 467 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 FAM83AQ86UY5 434 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 FAM160B2Q86V87 743 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 MCF2L2Q86YR7 1114 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 BICD2Q8TD16 824 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 EDC3Q96F86 508 aaKnown RBP5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 EFCC1Q9HA90 598 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 C6orf50Q9HD87 102 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 FBXO40Q9UH90 709 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 FAM205AQ6ZU69 1335 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 NOP56O00567 594 aaKnown RBP5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 CTNND1O60716 968 aaKnown RBP5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 TTLL1O95922 423 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 IL1R1P14778 569 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 DSG3P32926 999 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 FCGRTP55899 365 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 HEATR3Q7Z4Q2 680 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 ZDHHC15Q96MV8 337 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 LZTS2Q9BRK4 669 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 TMEM39BQ9GZU3 492 aa5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 MRPL11Q9Y3B7 192 aaKnown RBP5.96□□□□□ -1.46
SCARNA15-201ENST00000607520 KLF18A0A0U1RQI7 1052 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 B4E1Z4 1266 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 TMEM232C9JQI7 657 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 POTEB2H3BUK9 544 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 ZNF280CQ8ND82 737 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 TMEM87BQ96K49 555 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 PIH1D3Q9NQM4 214 aaKnown RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 BMP2KQ9NSY1 1161 aaPredicted RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 GNA11P29992 359 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 PLCB2Q00722 1185 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 GLIPR1L2Q4G1C9 344 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 FAM47CQ5HY64 1035 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 FAM47AQ5JRC9 791 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 GIMAP6Q6P9H5 292 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 CCDC144CPQ8IYA2 1237 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 SPICE1Q8N0Z3 855 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 HOOK1Q9UJC3 728 aaKnown RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 ZNF541Q9H0D2 1346 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 RPAP1Q9BWH6 1393 aaPredicted RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 FDX1P10109 184 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 BMP3P12645 472 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 ARID4AP29374 1257 aaPredicted RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 CTCFP49711 727 aaPredicted RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 TMEM266Q2M3C6 531 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 GNPTABQ3T906 1256 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 GPATCH4Q5T3I0 446 aaKnown RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 CCDC129Q6ZRS4 1044 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 ATG9AQ7Z3C6 839 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 FCHSD1Q86WN1 690 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 ZKSCAN3Q9BRR0 538 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 OSBPL5Q9H0X9 879 aaPredicted RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 RBM28Q9NW13 759 aaKnown RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 CCPG1Q9ULG6 757 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 UTYO14607 1347 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 TRAK2O60296 914 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 MSNP26038 577 aaKnown RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 HMGCS2P54868 508 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 CTDSPL2Q05D32 466 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 PDE4DQ08499 809 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 NBPF12Q5TAG4 269 aaPredicted RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 FKBP1CQ5VVH2 108 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 PLEKHM2Q8IWE5 1019 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 SCYL3Q8IZE3 742 aa5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 SCAF8Q9UPN6 1271 aaKnown RBP5.95□□□□□ -1.46
SCARNA15-201ENST00000607520 HSPA6P17066 643 aa5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 CALML3P27482 149 aa5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 GCLCP48506 637 aaPredicted RBP5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 CDK8P49336 464 aa5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 C1QTNF8P60827 252 aa5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 NUCB2P80303 420 aa5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 SPDYE2Q495Y8 402 aa5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 FOXD4L5Q5VV16 416 aaPredicted RBP5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 LRRC47Q8N1G4 583 aaKnown RBP5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 JMYQ8N9B5 988 aa5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 FOXD4L4Q8WXT5 416 aaPredicted RBP5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 ESYT1Q9BSJ8 1104 aa5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 ANTXR1Q9H6X2 564 aa5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 TLR7Q9NYK1 1049 aaKnown RBP5.94□□□□□ -1.46
SCARNA15-201ENST00000607520 ZHX1Q9UKY1 873 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms