RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 FAM227BQ96M60 508 aa12.4□□□□□ -0.42
LINC01954-201ENST00000607419 ZDHHC15Q96MV8 337 aa12.4□□□□□ -0.42
LINC01954-201ENST00000607419 CPA4Q9UI42 421 aa12.4□□□□□ -0.42
LINC01954-201ENST00000607419 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
LINC01954-201ENST00000607419 LAMA4Q16363 1823 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 GPR75-ASB3A0A0A6YYF3 556 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 A0A0D9SFI3 127 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 MAGEB6P1A0A0J9YX57 407 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 IRF6O14896 467 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 EIF5BO60841 1220 aaKnown RBP12.39□□□□□ -0.43
LINC01954-201ENST00000607419 PSMC4P43686 418 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
LINC01954-201ENST00000607419 MFAP1P55081 439 aaKnown RBP12.39□□□□□ -0.43
LINC01954-201ENST00000607419 PPP4CP60510 307 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 SLFNL1Q499Z3 407 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 ADGRA1Q86SQ6 560 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 CERS3Q8IU89 383 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 OSBP2Q969R2 916 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 ESYT1Q9BSJ8 1104 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 COL25A1Q9BXS0 654 aaPredicted RBP12.39□□□□□ -0.43
LINC01954-201ENST00000607419 PUS7LQ9H0K6 701 aaKnown RBP12.39□□□□□ -0.43
LINC01954-201ENST00000607419 SRRDQ9UH36 339 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
LINC01954-201ENST00000607419 SPTBN5Q9NRC6 3674 aaKnown RBP12.39□□□□□ -0.43
LINC01954-201ENST00000607419 ADGRA2Q96PE1 1338 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 MYO1BO43795 1136 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 GJB1P08034 283 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 PLCG2P16885 1265 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 GRK4P32298 578 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 BTDP43251 543 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 CACNB3P54284 484 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 ARHGEF6Q15052 776 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 MIGA1Q8NAN2 632 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
LINC01954-201ENST00000607419 RNF208Q9H0X6 261 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 UNC93B1Q9H1C4 597 aa12.38□□□□□ -0.43
LINC01954-201ENST00000607419 CCDC171Q6TFL3 1326 aa12.37□□□□□ -0.43
LINC01954-201ENST00000607419 SPDYE5A6NIY4 337 aa12.37□□□□□ -0.43
LINC01954-201ENST00000607419 M0R2C6 588 aa12.37□□□□□ -0.43
LINC01954-201ENST00000607419 SGSM2O43147 1006 aa12.37□□□□□ -0.43
LINC01954-201ENST00000607419 GPAA1O43292 621 aa12.37□□□□□ -0.43
LINC01954-201ENST00000607419 MBD4O95243 580 aa12.37□□□□□ -0.43
LINC01954-201ENST00000607419 MOGSQ13724 837 aa12.37□□□□□ -0.43
LINC01954-201ENST00000607419 C8orf34Q49A92 452 aa12.37□□□□□ -0.43
LINC01954-201ENST00000607419 STRBPQ96SI9 672 aaKnown RBP12.37□□□□□ -0.43
LINC01954-201ENST00000607419 RIOK1Q9BRS2 568 aaKnown RBP12.37□□□□□ -0.43
LINC01954-201ENST00000607419 AATFQ9NY61 560 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC01954-201ENST00000607419 PTPRFP10586 1907 aa12.37□□□□□ -0.43
LINC01954-201ENST00000607419 PRUNE2Q8WUY3 3088 aa12.36□□□□□ -0.43
LINC01954-201ENST00000607419 RPAP1Q9BWH6 1393 aaPredicted RBP12.36□□□□□ -0.43
LINC01954-201ENST00000607419 GNAT2P19087 354 aa12.36□□□□□ -0.43
LINC01954-201ENST00000607419 DYNLL1P63167 89 aaKnown RBP12.36□□□□□ -0.43
LINC01954-201ENST00000607419 KIF22Q14807 665 aa12.36□□□□□ -0.43
LINC01954-201ENST00000607419 APOBEC3HQ6NTF7 200 aaKnown RBP12.36□□□□□ -0.43
LINC01954-201ENST00000607419 LCORLQ8N3X6 602 aa12.36□□□□□ -0.43
LINC01954-201ENST00000607419 U2AF1L4Q8WU68 220 aaKnown RBP12.36□□□□□ -0.43
LINC01954-201ENST00000607419 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
LINC01954-201ENST00000607419 ARMT1Q9H993 441 aa12.36□□□□□ -0.43
LINC01954-201ENST00000607419 DDX60LQ5H9U9 1706 aaKnown RBP12.36□□□□□ -0.43
LINC01954-201ENST00000607419 DNAH12Q6ZR08 3092 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 PHIPQ8WWQ0 1821 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 SGPL1O95470 568 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 GNRH1P01148 92 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 CETPP11597 493 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 PRMT2P55345 433 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 RHBDL3P58872 404 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 PRKCZQ05513 592 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 CCDC129Q6ZRS4 1044 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 ZNF589Q86UQ0 364 aaPredicted RBP12.35□□□□□ -0.43
LINC01954-201ENST00000607419 TEX11Q8IYF3 940 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 SH3RF3Q8TEJ3 882 aaPredicted RBP12.35□□□□□ -0.43
LINC01954-201ENST00000607419 GDF15Q99988 308 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 HTATIP2Q9BUP3 242 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 IL25Q9H293 177 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 USP40Q9NVE5 1235 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 MYPNQ86TC9 1320 aa12.35□□□□□ -0.43
LINC01954-201ENST00000607419 CUL9Q8IWT3 2517 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 PATL2C9JE40 543 aaKnown RBP12.34□□□□□ -0.43
LINC01954-201ENST00000607419 FARP2O94887 1054 aaPredicted RBP12.34□□□□□ -0.43
LINC01954-201ENST00000607419 REC8O95072 547 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 FMNL1O95466 1100 aaPredicted RBP12.34□□□□□ -0.43
LINC01954-201ENST00000607419 INPP5BP32019 993 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 ERO1BQ86YB8 467 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 DEFB123Q8N688 67 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 RAET1EQ8TD07 263 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 DIS3LQ8TF46 1054 aaKnown RBP12.34□□□□□ -0.43
LINC01954-201ENST00000607419 MTMR10Q9NXD2 777 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 TMOD2Q9NZR1 351 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 NR2E3Q9Y5X4 410 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 CSADQ9Y600 493 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 SLC4A4Q9Y6R1 1079 aa12.34□□□□□ -0.43
LINC01954-201ENST00000607419 PLXNB2O15031 1838 aa12.33□□□□□ -0.44
LINC01954-201ENST00000607419 A0A1W2PPC1 479 aa12.33□□□□□ -0.44
LINC01954-201ENST00000607419 HAX1O00165 279 aa12.33□□□□□ -0.44
LINC01954-201ENST00000607419 PDHXO00330 501 aa12.33□□□□□ -0.44
LINC01954-201ENST00000607419 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms