RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 PLEKHA8P1O95397 391 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 STARD3NLO95772 234 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 CCDC175P0C221 793 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 DZIP3Q86Y13 1208 aaKnown RBP7.35□□□□□ -1.23
RPF2-204ENST00000607388 PROCA1Q8NCQ7 364 aaPredicted RBP7.35□□□□□ -1.23
RPF2-204ENST00000607388 ANKRD20A12PQ8NF67 263 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 IPO4Q8TEX9 1081 aaKnown RBP7.35□□□□□ -1.23
RPF2-204ENST00000607388 HPS3Q969F9 1004 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 TRIM75PA6NK02 468 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 TSPY2A6NKD2 308 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 AKR1B15C9JRZ8 316 aaPredicted RBP7.35□□□□□ -1.23
RPF2-204ENST00000607388 F8W031 263 aaPredicted RBP7.35□□□□□ -1.23
RPF2-204ENST00000607388 IFIT1BQ5T764 474 aaKnown RBP7.35□□□□□ -1.23
RPF2-204ENST00000607388 SPECC1LQ69YQ0 1117 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 BRAPQ7Z569 592 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 TRIM47Q96LD4 638 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 GPR101Q96P66 508 aaPredicted RBP7.35□□□□□ -1.23
RPF2-204ENST00000607388 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.35□□□□□ -1.23
RPF2-204ENST00000607388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.35□□□□□ -1.23
RPF2-204ENST00000607388 TBC1D7Q9P0N9 293 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 SAP30BPQ9UHR5 308 aaKnown RBP7.35□□□□□ -1.23
RPF2-204ENST00000607388 GDAQ9Y2T3 454 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 KIF20BQ96Q89 1820 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 MST1RQ04912 1400 aa7.35□□□□□ -1.23
RPF2-204ENST00000607388 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.34□□□□□ -1.23
RPF2-204ENST00000607388 TRIM21P19474 475 aaKnown RBP7.34□□□□□ -1.23
RPF2-204ENST00000607388 NOSTRINQ8IVI9 506 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 SYMPKQ92797 1274 aaKnown RBP7.34□□□□□ -1.23
RPF2-204ENST00000607388 SMARCAL1Q9NZC9 954 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 NIP7Q9Y221 180 aaKnown RBP eCLIP7.34□□□□□ -1.23
RPF2-204ENST00000607388 FAN1Q9Y2M0 1017 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 STRCP1A6NGW2 1772 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 KIF2AO00139 706 aaPredicted RBP7.34□□□□□ -1.23
RPF2-204ENST00000607388 YEATS4O95619 227 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 CAVIN2O95810 425 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 VEGFAP15692 232 aaPredicted RBP7.34□□□□□ -1.23
RPF2-204ENST00000607388 XBP1P17861 261 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 LLGL1Q15334 1064 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 ZSCAN26Q16670 478 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 NYAP1Q6ZVC0 841 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 HEATR3Q7Z4Q2 680 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 GPATCH11Q8N954 259 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 CALCOCO1Q9P1Z2 691 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 TECPR2O15040 1411 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 USP17L12C9JPN9 530 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 USP17L21D6R901 530 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 ZEB2O60315 1214 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 PLA2G4AP47712 749 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 IRX5P78411 483 aaPredicted RBP7.34□□□□□ -1.23
RPF2-204ENST00000607388 NCAPHQ15003 741 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 LONRF2Q1L5Z9 754 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 SPTY2D1Q68D10 685 aaPredicted RBP7.34□□□□□ -1.23
RPF2-204ENST00000607388 DYMQ7RTS9 669 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 GOLGA1Q92805 767 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 MMRN2Q9H8L6 949 aa7.34□□□□□ -1.23
RPF2-204ENST00000607388 GNL3LQ9NVN8 582 aaKnown RBP7.34□□□□□ -1.23
RPF2-204ENST00000607388 IFT172Q9UG01 1749 aa7.34□□□□□ -1.24
RPF2-204ENST00000607388 UBN2Q6ZU65 1347 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 SASH3O75995 380 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 BMP6P22004 513 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 IGHMBP2P38935 993 aaKnown RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 MTIF2P46199 727 aaKnown RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 PPARAQ07869 468 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 PTGDRQ13258 359 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 TCIRG1Q13488 830 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 RASGRF1Q13972 1273 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 TDRD12Q587J7 1177 aaKnown RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 EARS2Q5JPH6 523 aaKnown RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 MB21D2Q8IYB1 491 aaPredicted RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 ZNF654Q8IZM8 581 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 SMCR8Q8TEV9 937 aaPredicted RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 AK7Q96M32 723 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 CHP1Q99653 195 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 BRMS1Q9HCU9 246 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 UTRNP46939 3433 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 HGSO14964 777 aaPredicted RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 ARHGAP6O43182 974 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 CYP2D6P10635 497 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 CCDC122Q5T0U0 273 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 USPL1Q5W0Q7 1092 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 RASGRP2Q7LDG7 609 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 SPATA5Q8NB90 893 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 ABCB6Q9NP58 842 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 POLR3EQ9NVU0 708 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 BTG4Q9NY30 223 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 ZNF219Q9P2Y4 722 aaPredicted RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 MAGEC2Q9UBF1 373 aaPredicted RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 DIP2AQ14689 1571 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 TNKSO95271 1327 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 SYNRGQ9UMZ2 1314 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 CTAGE15A4D2H0 777 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 CTAGE9A4FU28 777 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 H7C1W4 665 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 CTAGE8P0CG41 777 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 SLC5A1P13866 664 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 UBA7P41226 1012 aa7.33□□□□□ -1.24
RPF2-204ENST00000607388 UTP14CQ5TAP6 766 aaKnown RBP7.33□□□□□ -1.24
RPF2-204ENST00000607388 KCTD16Q68DU8 428 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms