RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 KLHL10Q6JEL2 608 aa8.05□□□□□ -1.12
CDC40-207ENST00000606893 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
CDC40-207ENST00000606893 AMOTL1Q8IY63 956 aa8.05□□□□□ -1.12
CDC40-207ENST00000606893 RTKN2Q8IZC4 609 aa8.05□□□□□ -1.12
CDC40-207ENST00000606893 RRAGCQ9HB90 399 aa8.05□□□□□ -1.12
CDC40-207ENST00000606893 LY75O60449 1722 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 PATL2C9JE40 543 aaKnown RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 ZNF500O60304 480 aaPredicted RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 CCDC192P0DO97 292 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 CAPN2P17655 700 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 HTRA3P83110 453 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 CIAPIN1Q6FI81 312 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 TMED8Q6PL24 325 aaPredicted RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 RALYLQ86SE5 291 aaKnown RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 FSIP1Q8NA03 581 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 PRMT6Q96LA8 375 aaPredicted RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 MCM9Q9NXL9 1143 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 CNOT7Q9UIV1 285 aaKnown RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 NOL7Q9UMY1 257 aaKnown RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 RIC1Q4ADV7 1423 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 NFIAQ12857 509 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 STK38Q15208 465 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 CCAR1Q8IX12 1150 aaKnown RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 AOPEPQ8N6M6 819 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 SH3RF3Q8TEJ3 882 aaPredicted RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 DYNLL2Q96FJ2 89 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 USP40Q9NVE5 1235 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 C4AP0C0L4 1744 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 GPAA1O43292 621 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 FGFR2P21802 821 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 BTDP43251 543 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 UBE2HP62256 183 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 HOMER1Q86YM7 354 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 ZFPM1Q8IX07 1006 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 CLIP2Q9UDT6 1046 aa8.04□□□□□ -1.12
CDC40-207ENST00000606893 U3KPZ7 1027 aaPredicted RBP8.04□□□□□ -1.12
CDC40-207ENST00000606893 GOLGA8BA8MQT2 603 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 LDHCP07864 332 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 SHROOM1Q2M3G4 852 aaPredicted RBP8.03□□□□□ -1.12
CDC40-207ENST00000606893 MOB2Q70IA6 237 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 CBX8Q9HC52 389 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 PAPPAQ13219 1627 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 TNRC6CQ9HCJ0 1690 aaKnown RBP8.03□□□□□ -1.12
CDC40-207ENST00000606893 SPEF2Q9C093 1822 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 KLF18A0A0U1RQI7 1052 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 PTPDC1A2A3K4 754 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 RIOK3O14730 519 aaKnown RBP8.03□□□□□ -1.12
CDC40-207ENST00000606893 RANBP6O60518 1105 aaKnown RBP8.03□□□□□ -1.12
CDC40-207ENST00000606893 ADD1P35611 737 aaKnown RBP8.03□□□□□ -1.12
CDC40-207ENST00000606893 KRT32Q14532 448 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 DLGAP5Q15398 846 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 IMMTQ16891 758 aaKnown RBP8.03□□□□□ -1.12
CDC40-207ENST00000606893 KCTD19Q17RG1 926 aaPredicted RBP8.03□□□□□ -1.12
CDC40-207ENST00000606893 CFAP100Q494V2 611 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 FAM47AQ5JRC9 791 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 DPY19L2Q6NUT2 758 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 CCDC73Q6ZRK6 1079 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 C11orf57Q6ZUT1 292 aaPredicted RBP8.03□□□□□ -1.12
CDC40-207ENST00000606893 TEX11Q8IYF3 940 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 C7orf43Q8WVR3 580 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 USP28Q96RU2 1077 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 HELLSQ9NRZ9 838 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 ZNRF3Q9ULT6 936 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 ATP6V1DQ9Y5K8 247 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 MRVI1Q9Y6F6 885 aa8.03□□□□□ -1.12
CDC40-207ENST00000606893 MKI67P46013 3256 aaKnown RBP8.03□□□□□ -1.12
CDC40-207ENST00000606893 MAGEB6P1A0A0J9YX57 407 aa8.02□□□□□ -1.12
CDC40-207ENST00000606893 USP27XA6NNY8 438 aa8.02□□□□□ -1.12
CDC40-207ENST00000606893 KINO60870 393 aaKnown RBP8.02□□□□□ -1.12
CDC40-207ENST00000606893 LMNB1P20700 586 aa8.02□□□□□ -1.12
CDC40-207ENST00000606893 STOX1Q6ZVD7 989 aa8.02□□□□□ -1.12
CDC40-207ENST00000606893 SLF2Q8IX21 1173 aa8.02□□□□□ -1.12
CDC40-207ENST00000606893 WDR66Q8TBY9 1149 aa8.02□□□□□ -1.12
CDC40-207ENST00000606893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.02□□□□□ -1.12
CDC40-207ENST00000606893 APPBP2Q92624 585 aa8.02□□□□□ -1.12
CDC40-207ENST00000606893 NAPBQ9H115 298 aa8.02□□□□□ -1.12
CDC40-207ENST00000606893 LAMB4A4D0S4 1761 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 TUBGCP6Q96RT7 1819 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 LOC102724159A0A0B4J2E5 919 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 USP17L12C9JPN9 530 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 USP17L21D6R901 530 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 CASP1P29466 404 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 MCM2P49736 904 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 SCRN1Q12765 414 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 PWP2Q15269 919 aaKnown RBP8.02□□□□□ -1.13
CDC40-207ENST00000606893 FBXO33Q7Z6M2 555 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 TRPM4Q8TD43 1214 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 CLIC6Q96NY7 704 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 TMEM39BQ9GZU3 492 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 EPC1Q9H2F5 836 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 SENP2Q9HC62 589 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 COL5A3P25940 1745 aaPredicted RBP8.02□□□□□ -1.13
CDC40-207ENST00000606893 RPAP1Q9BWH6 1393 aaPredicted RBP8.02□□□□□ -1.13
CDC40-207ENST00000606893 ZNF213O14771 459 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 BAG3O95817 575 aa8.02□□□□□ -1.13
CDC40-207ENST00000606893 PTMSP20962 102 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms