RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	TACO1	Q9BSH4	297 aa	Known RBP	18.92	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	MYO1A	Q9UBC5	1043 aa		18.92	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	KCNH3	Q9ULD8	1083 aa		18.92	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	IVNS1ABP	Q9Y6Y0	642 aa		18.92	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	RGS16	O15492	202 aa	Predicted RBP	18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	PHEX	P78562	749 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	SEPT8	Q92599	483 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	INTS4	Q96HW7	963 aa	Known RBP	18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	AQR	O60306	1485 aa	Known RBP eCLIP	18.91	■□□□□ 0.62	1e-10	■■■■□ 22
ZSWIM8-223	ENST00000605216	PFDN6	O15212	129 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	OAT	P04181	439 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	DZIP3	Q86Y13	1208 aa	Known RBP	18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	EXOC3	O60645	756 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	BAG2	O95816	211 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	MYCL	P12524	364 aa	Predicted RBP	18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	TXK	P42681	527 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	FANCC	Q00597	558 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	SFMBT2	Q5VUG0	894 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	SAP30BP	Q9UHR5	308 aa	Known RBP	18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	GSTA1	P08263	222 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	GSTA2	P09210	222 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	LONRF2	Q1L5Z9	754 aa		18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	SPOUT1	Q5T280	376 aa	Known RBP	18.91	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	EFCC1	Q9HA90	598 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	DENND2A	Q9ULE3	1009 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	PDCD2	Q16342	344 aa	Predicted RBP	18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	TEX11	Q8IYF3	940 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	HELLS	Q9NRZ9	838 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	PPARD	Q03181	441 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	ZBTB17	Q13105	803 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	HACE1	Q8IYU2	909 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	MYCT1	Q8N699	235 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	HIP1R	O75146	1068 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	SF3A3	Q12874	501 aa	Known RBP eCLIP	18.9	■□□□□ 0.62	2e-10	■■■■■ 37.1
ZSWIM8-223	ENST00000605216	MAEA	Q7L5Y9	396 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	MICAL1	Q8TDZ2	1067 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	RIC8A	Q9NPQ8	531 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	PA2G4	Q9UQ80	394 aa	Known RBP	18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	MAPK8IP1	Q9UQF2	711 aa		18.9	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	IRS4	O14654	1257 aa	Predicted RBP	18.89	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	PDCD7	Q8N8D1	485 aa	Known RBP	18.89	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	RBM17	Q96I25	401 aa	Known RBP	18.89	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	SCYL1	Q96KG9	808 aa		18.89	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	DNM3	Q9UQ16	869 aa		18.89	■□□□□ 0.62
ZSWIM8-223	ENST00000605216	KRT81	Q14533	505 aa		18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	ANO1	Q5XXA6	986 aa		18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	CCDC13	Q8IYE1	715 aa		18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	TRIM68	Q6AZZ1	485 aa		18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	MLKL	Q8NB16	471 aa		18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	NUCKS1	Q9H1E3	243 aa	Known RBP	18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	MX2	P20592	715 aa		18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	GABPB1	Q06547	395 aa	Predicted RBP	18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	CHRNA2	Q15822	529 aa		18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	GRK7	Q8WTQ7	553 aa		18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	SPDL1	Q96EA4	605 aa		18.89	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	MBD4	O95243	580 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	MAP2K2	P36507	400 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	IMPACT	Q9P2X3	320 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	GCK	P35557	465 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	RAD51AP2	Q09MP3	1159 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	TFCP2	Q12800	502 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	TRIM50	Q86XT4	487 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	RAB20	Q9NX57	234 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	OAS2	P29728	719 aa	Known RBP	18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	LRGUK	Q96M69	825 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	GOLGA8CP	A6NN73	597 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	DDX39A	O00148	427 aa	Known RBP	18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	TTC4	O95801	387 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	LONRF3	Q496Y0	759 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	HERC4	Q5GLZ8	1057 aa	Predicted RBP	18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	TRPC6	Q9Y210	931 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	CUTA	O60888	179 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	ELF2	Q15723	593 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	HELB	Q8NG08	1087 aa	Predicted RBP	18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	SNX29	Q8TEQ0	813 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	AMFR	Q9UKV5	643 aa		18.88	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	ATP6V1E1	P36543	226 aa		18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	TMEM87B	Q96K49	555 aa		18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	MRPL46	Q9H2W6	279 aa	Known RBP	18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	GCNT3	O95395	438 aa		18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	RTCB	Q9Y3I0	505 aa	Known RBP	18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	HOMER3	Q9NSC5	361 aa		18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	HAUS1	Q96CS2	278 aa		18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	PSMB7	Q99436	277 aa		18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	THEG	Q9P2T0	379 aa		18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	LRWD1	Q9UFC0	647 aa		18.87	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	TTC38	Q5R3I4	469 aa		18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	IQCD	Q96DY2	449 aa		18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	CCDC68	Q9H2F9	335 aa		18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	TAB2	Q9NYJ8	693 aa		18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	PPP1R9A	Q9ULJ8	1098 aa		18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	CTNNA1	P35221	906 aa	Known RBP	18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	PDZD4	Q76G19	769 aa	Predicted RBP	18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	MED10	Q9BTT4	135 aa		18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	MRPL44	Q9H9J2	332 aa	Known RBP	18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	KCNG1	Q9UIX4	513 aa		18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	POLR2D	O15514	142 aa	Known RBP	18.86	■□□□□ 0.61
ZSWIM8-223	ENST00000605216	ZBED4	O75132	1171 aa		18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms