RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 POLA2Q14181 598 aa15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 CRACR2BQ8N4Y2 399 aaPredicted RBP15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 DIS3LQ8TF46 1054 aaKnown RBP15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 DBNDD2Q9BQY9 259 aa15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 TRIM34Q9BYJ4 488 aa15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 GINM1Q9NU53 330 aa15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 PALD1Q9ULE6 856 aa15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 LAMA3Q16787 3333 aa15.74■□□□□ 0.11
NEK4P3-201ENST00000604859 FLT1P17948 1338 aa15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 USP17L10C9JJH3 530 aa15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 OS9Q13438 667 aaPredicted RBP15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 ADGRA1Q86SQ6 560 aa15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 TMEM57Q8N5G2 664 aa15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 GPRC5AQ8NFJ5 357 aa15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 SSH3Q8TE77 659 aa15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 ZNF512BQ96KM6 892 aaPredicted RBP15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 NBPF3Q9H094 633 aa15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 DNAJC18Q9H819 358 aa15.73■□□□□ 0.11
NEK4P3-201ENST00000604859 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 XRCC5P13010 732 aaKnown RBP15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 CYP2B6P20813 491 aa15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 ZAP70P43403 619 aa15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 HERVK_113P62684 666 aa15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 TRIB2Q92519 343 aa15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 NUDT12Q9BQG2 462 aa15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 TXNRD2Q9NNW7 524 aa15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 RBPJLQ9UBG7 517 aa15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 MAST2Q6P0Q8 1798 aa15.72■□□□□ 0.11
NEK4P3-201ENST00000604859 PEX10O60683 326 aa15.71■□□□□ 0.11
NEK4P3-201ENST00000604859 GDF11O95390 407 aa15.71■□□□□ 0.11
NEK4P3-201ENST00000604859 HLA-DOAP06340 250 aa15.71■□□□□ 0.11
NEK4P3-201ENST00000604859 SHROOM1Q2M3G4 852 aaPredicted RBP15.71■□□□□ 0.11
NEK4P3-201ENST00000604859 Q3C1V9 767 aa15.71■□□□□ 0.11
NEK4P3-201ENST00000604859 ZKSCAN2Q63HK3 967 aa15.71■□□□□ 0.11
NEK4P3-201ENST00000604859 SAP30BPQ9UHR5 308 aaKnown RBP15.71■□□□□ 0.11
NEK4P3-201ENST00000604859 OGDHLQ9ULD0 1010 aa15.71■□□□□ 0.11
NEK4P3-201ENST00000604859 ZBTB21Q9ULJ3 1066 aa15.71■□□□□ 0.11
NEK4P3-201ENST00000604859 MYH1P12882 1939 aa15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 MAPK4P31152 587 aa15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 BMP8BP34820 402 aa15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 MNX1P50219 401 aaPredicted RBP15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 DYNLL1P63167 89 aaKnown RBP15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 MAP3K21Q5TCX8 1036 aa15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 TRMT44Q8IYL2 757 aaKnown RBP15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 C7orf61Q8IZ16 206 aa15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 SOCS4Q8WXH5 440 aa15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 C11orf49Q9H6J7 331 aa15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 PIH1D3Q9NQM4 214 aaKnown RBP15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 EMILIN3Q9NT22 766 aa15.7■□□□□ 0.1
NEK4P3-201ENST00000604859 SOX1O00570 391 aaPredicted RBP15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 PRKAR2AP13861 404 aaKnown RBP15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 CYP7A1P22680 504 aa15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 ERVK-9P63128 1117 aa15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 ERVK-24P63145 666 aa15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 PDE3AQ14432 1141 aa15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L2Q6R6M4 530 aa15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 CCAR1Q8IX12 1150 aaKnown RBP15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 GTF3C2Q8WUA4 911 aaPredicted RBP15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 GDF15Q99988 308 aa15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 NOP58Q9Y2X3 529 aaKnown RBP15.69■□□□□ 0.1
NEK4P3-201ENST00000604859 DDX60LQ5H9U9 1706 aaKnown RBP15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 GH2P01242 217 aa15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 TATDN1Q6P1N9 297 aa15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 GPR142Q7Z601 462 aa15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 CERS3Q8IU89 383 aa15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 USP6NLQ92738 828 aa15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 LRCH3Q96II8 777 aa15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 PAGR1Q9BTK6 254 aa15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 CCDC8Q9H0W5 538 aaPredicted RBP15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 PORCNQ9H237 461 aa15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 C1orf115Q9H7X2 142 aa15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 DBNLQ9UJU6 430 aaKnown RBP15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 ZMYND8Q9ULU4 1186 aaPredicted RBP15.68■□□□□ 0.1
NEK4P3-201ENST00000604859 IDH1O75874 414 aaKnown RBP15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 ZKSCAN1P17029 563 aaPredicted RBP15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 RGS2P41220 211 aa15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 USP5P45974 858 aa15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 CACNB2Q08289 660 aaPredicted RBP15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 MORN1Q5T089 497 aa15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 POTEEQ6S8J3 1075 aa15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 PLEKHH3Q7Z736 793 aa15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 EAF2Q96CJ1 260 aaPredicted RBP15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 TLR7Q9NYK1 1049 aaKnown RBP15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 COL6A3P12111 3177 aa15.67■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L15C9J2P7 530 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L13C9JLJ4 530 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L11C9JVI0 530 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L18D6R9N7 530 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L22D6RA61 530 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L17D6RBQ6 530 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L19D6RCP7 530 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L20D6RJB6 530 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 SYN1P17600 705 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 USP17L24Q0WX57 530 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 MIGA1Q8NAN2 632 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 SERPINB13Q9UIV8 391 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 RABGAP1Q9Y3P9 1069 aa15.66■□□□□ 0.1
NEK4P3-201ENST00000604859 RAB3GAP1Q15042 981 aa15.65■□□□□ 0.1
NEK4P3-201ENST00000604859 ZYXQ15942 572 aaKnown RBP15.65■□□□□ 0.1
NEK4P3-201ENST00000604859 CCL14Q16627 93 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms