RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.4□□□□□ -1.55
LINC01109-201ENST00000603837 K7ELQ4 463 aaPredicted RBP5.4□□□□□ -1.55
LINC01109-201ENST00000603837 IFRD1O00458 451 aaPredicted RBP5.4□□□□□ -1.55
LINC01109-201ENST00000603837 MBD3O95983 291 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 SKOR1P84550 965 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 AGERQ15109 404 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 RBBP5Q15291 538 aaKnown RBP5.4□□□□□ -1.55
LINC01109-201ENST00000603837 MSL1Q68DK7 614 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 EFCAB13Q8IY85 973 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 FBXO41Q8TF61 875 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 STK32AQ8WU08 396 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 EIF2AK1Q9BQI3 630 aaKnown RBP5.4□□□□□ -1.55
LINC01109-201ENST00000603837 LZTS2Q9BRK4 669 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 VEZTQ9HBM0 779 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 TMOD4Q9NZQ9 345 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 EXOC6BQ9Y2D4 811 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 MRPS23Q9Y3D9 190 aaKnown RBP5.4□□□□□ -1.55
LINC01109-201ENST00000603837 NUP155O75694 1391 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 TRAPPC8Q9Y2L5 1435 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 ATP10AO60312 1499 aa5.4□□□□□ -1.55
LINC01109-201ENST00000603837 TSPY2A6NKD2 308 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 CCDC85CA6NKD9 419 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 H0Y3Z8 333 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 PIP5K1CO60331 668 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 TSPY3P0CV98 308 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 TSPY8P0CW00 308 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 RPS6KA3P51812 740 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 HSD17B7P56937 341 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 TSPY1Q01534 308 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 RASA3Q14644 834 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 TBC1D10BQ4KMP7 808 aaPredicted RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 ANKRD45Q5TZF3 282 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 SLC4A10Q6U841 1118 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 SYAP1Q96A49 352 aaPredicted RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 CDHR1Q96JP9 859 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 YIPF2Q9BWQ6 316 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 DHX36Q9H2U1 1008 aaKnown RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 PDRG1Q9NUG6 133 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 ANKRD30AQ9BXX3 1397 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 MLH3Q9UHC1 1453 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 SAMD9LQ8IVG5 1584 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 AK9Q5TCS8 1911 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 ZC3H13Q5T200 1668 aaKnown RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 MADDQ8WXG6 1647 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 NEURL4Q96JN8 1562 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 PLA2R1Q13018 1463 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 LINC00854A0A1B0GVQ3 168 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 GCFC2P16383 781 aaKnown RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 RASA1P20936 1047 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 CDC27P30260 824 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 MAGEA8P43361 318 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 POU5F1BQ06416 359 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 NEDD9Q14511 834 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 PDCD2Q16342 344 aaPredicted RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 TADA2BQ86TJ2 420 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 GABPB2Q8TAK5 448 aaPredicted RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 ZNF483Q8TF39 744 aaPredicted RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 GPKOWQ92917 476 aaPredicted RBP eCLIP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 KIF2CQ99661 725 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 COMMD8Q9NX08 183 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 PSD3Q9NYI0 1048 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 SCHIP1Q9P0W5 487 aaPredicted RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 MAFFQ9ULX9 164 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 COL17A1Q9UMD9 1497 aaPredicted RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 ANKRD50Q9ULJ7 1429 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 GPRASP1Q5JY77 1395 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 CGNL1Q0VF96 1302 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 KIF3BO15066 747 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 SGSM2O43147 1006 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 TPPPO94811 219 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 TSPAN7P41732 249 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 FOXC1Q12948 553 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 GRIK3Q13003 919 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 AMOTQ4VCS5 1084 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 COBLL1Q53SF7 1204 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 SOGA3Q5TF21 947 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 GGT6Q6P531 493 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 JAMLQ86YT9 394 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 N4BP2L2Q92802 583 aaPredicted RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 EXOC4Q96A65 974 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 SRRTQ9BXP5 876 aaKnown RBP5.39□□□□□ -1.55
LINC01109-201ENST00000603837 ABCG4Q9H172 646 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 ENAMQ9NRM1 1142 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 POLG2Q9UHN1 485 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 TAGLN3Q9UI15 199 aa5.39□□□□□ -1.55
LINC01109-201ENST00000603837 IQGAP1P46940 1657 aa5.38□□□□□ -1.55
LINC01109-201ENST00000603837 PLCH2O75038 1416 aa5.38□□□□□ -1.55
LINC01109-201ENST00000603837 ANKRD36BQ8N2N9 1353 aa5.38□□□□□ -1.55
LINC01109-201ENST00000603837 SOS1Q07889 1333 aaPredicted RBP5.38□□□□□ -1.55
LINC01109-201ENST00000603837 SNUPNO95149 360 aaKnown RBP5.38□□□□□ -1.55
LINC01109-201ENST00000603837 H2AFXP16104 143 aaPredicted RBP5.38□□□□□ -1.55
LINC01109-201ENST00000603837 HOXC13P31276 330 aa5.38□□□□□ -1.55
LINC01109-201ENST00000603837 CCNHP51946 323 aaPredicted RBP5.38□□□□□ -1.55
LINC01109-201ENST00000603837 AKNAD1Q5T1N1 836 aa5.38□□□□□ -1.55
LINC01109-201ENST00000603837 RC3H1Q5TC82 1133 aaKnown RBP5.38□□□□□ -1.55
LINC01109-201ENST00000603837 ZNF746Q6NUN9 644 aaPredicted RBP5.38□□□□□ -1.55
LINC01109-201ENST00000603837 PDXDC2PQ6P474 469 aa5.38□□□□□ -1.55
LINC01109-201ENST00000603837 CPLX2Q6PUV4 134 aaKnown RBP5.38□□□□□ -1.55
LINC01109-201ENST00000603837 C16orf54Q6UWD8 224 aa5.38□□□□□ -1.55
LINC01109-201ENST00000603837 KSR2Q6VAB6 950 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms