RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 SLFN12Q8IYM2 578 aa5.84□□□□□ -1.47
AC004542.1-201ENST00000602955 GALNT11Q8NCW6 608 aa5.84□□□□□ -1.47
AC004542.1-201ENST00000602955 ZNF417Q8TAU3 575 aa5.84□□□□□ -1.47
AC004542.1-201ENST00000602955 DHRS1Q96LJ7 313 aa5.84□□□□□ -1.47
AC004542.1-201ENST00000602955 ZNF587Q96SQ5 575 aaPredicted RBP5.84□□□□□ -1.47
AC004542.1-201ENST00000602955 IRF2BPLQ9H1B7 796 aa5.84□□□□□ -1.47
AC004542.1-201ENST00000602955 HIF3AQ9Y2N7 669 aa5.84□□□□□ -1.47
AC004542.1-201ENST00000602955 H3BM21 787 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 FANCGO15287 622 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 VSIG8P0DPA2 414 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 PMS1P54277 932 aaKnown RBP5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 NLRP12P59046 1061 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 ETF1P62495 437 aaKnown RBP5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 SRSF11Q05519 484 aaKnown RBP5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 PLEKHG6Q3KR16 790 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 GNPTABQ3T906 1256 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 TM4SF20Q53R12 229 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 MCATQ8IVS2 390 aaKnown RBP5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 MRPL41Q8IXM3 137 aaKnown RBP5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 STAG1Q8WVM7 1258 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 NINJ1Q92982 152 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 MFSD3Q96ES6 412 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 NXF1Q9UBU9 619 aaKnown RBP5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 CSADQ9Y600 493 aa5.83□□□□□ -1.48
AC004542.1-201ENST00000602955 FAM86C2PA6NEL3 165 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 AGRPO00253 132 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 RGS13O14921 159 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 ADAM11O75078 769 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 RFPL3O75679 317 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 NAT2P11245 290 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 POLR2BP30876 1174 aaKnown RBP5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 NTF4P34130 210 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 CD68P34810 354 aaPredicted RBP5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 ID3Q02535 119 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 RNFT1Q5M7Z0 435 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 SLC6A19Q695T7 634 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 HID1Q8IV36 788 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 FAM13CQ8NE31 585 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 ZNF507Q8TCN5 953 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 DCAF11Q8TEB1 546 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 ACDQ96AP0 544 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 TMEM87BQ96K49 555 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 COL25A1Q9BXS0 654 aaPredicted RBP5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 SUCOQ9UBS9 1254 aaKnown RBP5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 TJP2Q9UDY2 1190 aa5.82□□□□□ -1.48
AC004542.1-201ENST00000602955 DDX3YO15523 660 aaKnown RBP5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 COL9A3Q14050 684 aaPredicted RBP5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 FOXD4L6Q3SYB3 417 aaPredicted RBP5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 PPM1JQ5JR12 505 aa5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 FOXD4L3Q6VB84 417 aaPredicted RBP5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 C1orf229Q6ZS94 237 aaPredicted RBP5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 C8orf86Q6ZUL3 223 aa5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 CHSY3Q70JA7 882 aa5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 NOL8Q76FK4 1167 aaKnown RBP5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 NIM1KQ8IY84 436 aa5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 TMEM192Q8IY95 271 aa5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 DTWD1Q8N5C7 304 aa5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 IRX2Q9BZI1 471 aaPredicted RBP5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 RAD18Q9NS91 495 aa5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 CRIM1Q9NZV1 1036 aa5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 SUSD2Q9UGT4 822 aa5.81□□□□□ -1.48
AC004542.1-201ENST00000602955 A0A1W2PQU0 124 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 ANKRD34BA5PLL1 514 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 TMPRSS2O15393 492 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 DEAF1O75398 565 aaPredicted RBP5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 UBOX5O94941 541 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 NID1P14543 1247 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 CAP2P40123 477 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 EXOSC6Q5RKV6 272 aaKnown RBP5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 CCDC181Q5TID7 509 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 FOXB2Q5VYV0 432 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 PPFIBP1Q86W92 1011 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 RNF214Q8ND24 703 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 CHAC2Q8WUX2 184 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 EDARADDQ8WWZ3 215 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 KISS1RQ969F8 398 aaPredicted RBP5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 BTBD6Q96KE9 485 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 SLC6A18Q96N87 628 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 ARHGEF4Q9NR80 690 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 PICK1Q9NRD5 415 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 DISC1Q9NRI5 854 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 LRRC4BQ9NT99 713 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 KCNK4Q9NYG8 393 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 PPP1R9AQ9ULJ8 1098 aa5.8□□□□□ -1.48
AC004542.1-201ENST00000602955 KCNQ2O43526 872 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 PARNO95453 639 aaKnown RBP5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 PDGFRBP09619 1106 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 STAT3P40763 770 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 PABPC4Q13310 644 aaKnown RBP eCLIP5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 C21orf62-AS1Q17RA5 79 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 THNSL2Q86YJ6 484 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 DMRTC2Q8IXT2 367 aaPredicted RBP5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 DHX37Q8IY37 1157 aaKnown RBP5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 PHACTR4Q8IZ21 702 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 UBASH3BQ8TF42 649 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 SMARCC1Q92922 1105 aaPredicted RBP5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 EXOC2Q96KP1 924 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 KIF2CQ99661 725 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 HAUS7Q99871 368 aa5.79□□□□□ -1.48
AC004542.1-201ENST00000602955 DHRS4Q9BTZ2 278 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms