RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 AS3MTQ9HBK9 375 aa19.85■□□□□ 0.77
SSBP4-211ENST00000601614 HMG20BQ9P0W2 317 aa19.85■□□□□ 0.77
SSBP4-211ENST00000601614 ERVK-9P63128 1117 aa19.84■□□□□ 0.77
SSBP4-211ENST00000601614 ERVK-24P63145 666 aa19.84■□□□□ 0.77
SSBP4-211ENST00000601614 HERC5Q9UII4 1024 aaKnown RBP19.84■□□□□ 0.77
SSBP4-211ENST00000601614 TFCP2Q12800 502 aa19.83■□□□□ 0.77
SSBP4-211ENST00000601614 FAM9BQ8IZU0 186 aa19.83■□□□□ 0.77
SSBP4-211ENST00000601614 SH3RF3Q8TEJ3 882 aaPredicted RBP19.83■□□□□ 0.77
SSBP4-211ENST00000601614 TMOD4Q9NZQ9 345 aa19.83■□□□□ 0.77
SSBP4-211ENST00000601614 MAPK4P31152 587 aa19.82■□□□□ 0.76
SSBP4-211ENST00000601614 RGS2P41220 211 aa19.82■□□□□ 0.76
SSBP4-211ENST00000601614 PDE3AQ14432 1141 aa19.82■□□□□ 0.76
SSBP4-211ENST00000601614 TEX11Q8IYF3 940 aa19.82■□□□□ 0.76
SSBP4-211ENST00000601614 TRMT44Q8IYL2 757 aaKnown RBP19.82■□□□□ 0.76
SSBP4-211ENST00000601614 APBA2Q99767 749 aa19.82■□□□□ 0.76
SSBP4-211ENST00000601614 PAGR1Q9BTK6 254 aa19.82■□□□□ 0.76
SSBP4-211ENST00000601614 SENP6Q9GZR1 1112 aaPredicted RBP19.82■□□□□ 0.76
SSBP4-211ENST00000601614 FLRT1Q9NZU1 646 aa19.82■□□□□ 0.76
SSBP4-211ENST00000601614 MAP4K4O95819 1239 aaPredicted RBP19.81■□□□□ 0.76
SSBP4-211ENST00000601614 LDHCP07864 332 aa19.81■□□□□ 0.76
SSBP4-211ENST00000601614 MVPQ14764 893 aaKnown RBP19.81■□□□□ 0.76
SSBP4-211ENST00000601614 PLEKHH3Q7Z736 793 aa19.81■□□□□ 0.76
SSBP4-211ENST00000601614 SPATA5Q8NB90 893 aa19.81■□□□□ 0.76
SSBP4-211ENST00000601614 MEIS3Q99687 375 aa19.81■□□□□ 0.76
SSBP4-211ENST00000601614 PI4KBQ9UBF8 816 aa19.81■□□□□ 0.76
SSBP4-211ENST00000601614 CDH23Q9H251 3354 aa19.81■□□□□ 0.76
SSBP4-211ENST00000601614 GDF11O95390 407 aa19.8■□□□□ 0.76
SSBP4-211ENST00000601614 ASNSP08243 561 aa19.8■□□□□ 0.76
SSBP4-211ENST00000601614 ATN1P54259 1190 aaPredicted RBP19.8■□□□□ 0.76
SSBP4-211ENST00000601614 GSTO1P78417 241 aa19.8■□□□□ 0.76
SSBP4-211ENST00000601614 ZNF697Q5TEC3 545 aa19.8■□□□□ 0.76
SSBP4-211ENST00000601614 CDX2Q99626 313 aaPredicted RBP19.8■□□□□ 0.76
SSBP4-211ENST00000601614 RAI14Q9P0K7 980 aa19.8■□□□□ 0.76
SSBP4-211ENST00000601614 NDUFB9Q9Y6M9 179 aa19.8■□□□□ 0.76
SSBP4-211ENST00000601614 PRUNE2Q8WUY3 3088 aa19.8■□□□□ 0.76
SSBP4-211ENST00000601614 C19orf81C9J6K1 198 aa19.79■□□□□ 0.76
SSBP4-211ENST00000601614 USP17L10C9JJH3 530 aa19.79■□□□□ 0.76
SSBP4-211ENST00000601614 CNMDO75829 334 aa19.79■□□□□ 0.76
SSBP4-211ENST00000601614 LBHD1Q9BQE6 289 aaPredicted RBP19.79■□□□□ 0.76
SSBP4-211ENST00000601614 EMILIN3Q9NT22 766 aa19.79■□□□□ 0.76
SSBP4-211ENST00000601614 MYH1P12882 1939 aa19.78■□□□□ 0.76
SSBP4-211ENST00000601614 MCAMP43121 646 aa19.78■□□□□ 0.76
SSBP4-211ENST00000601614 MAP2K5Q13163 448 aa19.78■□□□□ 0.76
SSBP4-211ENST00000601614 METTL16Q86W50 562 aaKnown RBP19.78■□□□□ 0.76
SSBP4-211ENST00000601614 NEUROD6Q96NK8 337 aa19.78■□□□□ 0.76
SSBP4-211ENST00000601614 SMC4Q9NTJ3 1288 aa19.78■□□□□ 0.76
SSBP4-211ENST00000601614 AATFQ9NY61 560 aaKnown RBP eCLIP19.78■□□□□ 0.76
SSBP4-211ENST00000601614 ZBTB21Q9ULJ3 1066 aa19.78■□□□□ 0.76
SSBP4-211ENST00000601614 AKAP2Q9Y2D5 859 aa19.78■□□□□ 0.76
SSBP4-211ENST00000601614 TTC28Q96AY4 2481 aa19.77■□□□□ 0.76
SSBP4-211ENST00000601614 ARID4AP29374 1257 aaPredicted RBP19.77■□□□□ 0.76
SSBP4-211ENST00000601614 SHHQ15465 462 aa19.77■□□□□ 0.76
SSBP4-211ENST00000601614 ALDH1L2Q3SY69 923 aa19.77■□□□□ 0.76
SSBP4-211ENST00000601614 C9orf50Q5SZB4 431 aa19.77■□□□□ 0.76
SSBP4-211ENST00000601614 ADGRA1Q86SQ6 560 aa19.77■□□□□ 0.76
SSBP4-211ENST00000601614 MAPKAPK5Q8IW41 473 aa19.77■□□□□ 0.76
SSBP4-211ENST00000601614 CCAR1Q8IX12 1150 aaKnown RBP19.77■□□□□ 0.76
SSBP4-211ENST00000601614 DHX36Q9H2U1 1008 aaKnown RBP19.77■□□□□ 0.76
SSBP4-211ENST00000601614 DDX20Q9UHI6 824 aaKnown RBP19.77■□□□□ 0.76
SSBP4-211ENST00000601614 FLT1P17948 1338 aa19.76■□□□□ 0.75
SSBP4-211ENST00000601614 RTP1P59025 263 aa19.76■□□□□ 0.75
SSBP4-211ENST00000601614 TRPV1Q8NER1 839 aa19.76■□□□□ 0.75
SSBP4-211ENST00000601614 MAFAQ8NHW3 353 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-211ENST00000601614 NPLOC4Q8TAT6 608 aa19.76■□□□□ 0.75
SSBP4-211ENST00000601614 TGFBRAP1Q8WUH2 860 aa19.76■□□□□ 0.75
SSBP4-211ENST00000601614 EDC3Q96F86 508 aaKnown RBP19.76■□□□□ 0.75
SSBP4-211ENST00000601614 SEMA6BQ9H3T3 888 aa19.76■□□□□ 0.75
SSBP4-211ENST00000601614 PALD1Q9ULE6 856 aa19.76■□□□□ 0.75
SSBP4-211ENST00000601614 E9PSI1 815 aa19.75■□□□□ 0.75
SSBP4-211ENST00000601614 ANP32CO43423 234 aa19.75■□□□□ 0.75
SSBP4-211ENST00000601614 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
SSBP4-211ENST00000601614 MYLIPQ8WY64 445 aa19.75■□□□□ 0.75
SSBP4-211ENST00000601614 LPAR1Q92633 364 aa19.75■□□□□ 0.75
SSBP4-211ENST00000601614 TTYH1Q9H313 450 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-211ENST00000601614 NOB1Q9ULX3 412 aaKnown RBP19.75■□□□□ 0.75
SSBP4-211ENST00000601614 SRGAP3O43295 1099 aa19.74■□□□□ 0.75
SSBP4-211ENST00000601614 IGHA2P01877 340 aa19.74■□□□□ 0.75
SSBP4-211ENST00000601614 CYP2C19P33261 490 aa19.74■□□□□ 0.75
SSBP4-211ENST00000601614 MFSD14CQ5VZR4 134 aa19.74■□□□□ 0.75
SSBP4-211ENST00000601614 FOXP4Q8IVH2 680 aaPredicted RBP19.74■□□□□ 0.75
SSBP4-211ENST00000601614 GTF3C2Q8WUA4 911 aaPredicted RBP19.74■□□□□ 0.75
SSBP4-211ENST00000601614 PRDM6Q9NQX0 595 aa19.74■□□□□ 0.75
SSBP4-211ENST00000601614 LRP2BPQ9P2M1 347 aa19.74■□□□□ 0.75
SSBP4-211ENST00000601614 RABGAP1Q9Y3P9 1069 aa19.74■□□□□ 0.75
SSBP4-211ENST00000601614 DNM1LO00429 736 aa19.73■□□□□ 0.75
SSBP4-211ENST00000601614 PTPREP23469 700 aa19.73■□□□□ 0.75
SSBP4-211ENST00000601614 CNGA1P29973 690 aa19.73■□□□□ 0.75
SSBP4-211ENST00000601614 ZYXQ15942 572 aaKnown RBP19.73■□□□□ 0.75
SSBP4-211ENST00000601614 USP17L2Q6R6M4 530 aa19.73■□□□□ 0.75
SSBP4-211ENST00000601614 CRACR2BQ8N4Y2 399 aaPredicted RBP19.73■□□□□ 0.75
SSBP4-211ENST00000601614 CDCA7LQ96GN5 454 aa19.73■□□□□ 0.75
SSBP4-211ENST00000601614 BTBD7Q9P203 1132 aa19.73■□□□□ 0.75
SSBP4-211ENST00000601614 SAP30BPQ9UHR5 308 aaKnown RBP19.73■□□□□ 0.75
SSBP4-211ENST00000601614 PPP4CP60510 307 aa19.72■□□□□ 0.75
SSBP4-211ENST00000601614 MTX1Q13505 466 aa19.72■□□□□ 0.75
SSBP4-211ENST00000601614 GJC2Q5T442 439 aaPredicted RBP19.72■□□□□ 0.75
SSBP4-211ENST00000601614 GORABQ5T7V8 394 aa19.72■□□□□ 0.75
SSBP4-211ENST00000601614 NAA16Q6N069 864 aaPredicted RBP19.72■□□□□ 0.75
SSBP4-211ENST00000601614 C12orf42Q96LP6 360 aa19.72■□□□□ 0.75
SSBP4-211ENST00000601614 CWC22Q9HCG8 908 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms