RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	ANKRD45	Q5TZF3	282 aa		18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	PARK7	Q99497	189 aa	Known RBP	18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	EFCC1	Q9HA90	598 aa		18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	AS3MT	Q9HBK9	375 aa		18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	MCM9	Q9NXL9	1143 aa		18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	CPA4	Q9UI42	421 aa		18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	AGTPBP1	Q9UPW5	1226 aa		18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	MGAM	O43451	1857 aa		18.68	■□□□□ 0.58
PLD3-223	ENST00000600948	ERC2	O15083	957 aa		18.67	■□□□□ 0.58
PLD3-223	ENST00000600948	CYP2C8	P10632	490 aa		18.67	■□□□□ 0.58
PLD3-223	ENST00000600948	MX1	P20591	662 aa		18.67	■□□□□ 0.58
PLD3-223	ENST00000600948	EVX2	Q03828	476 aa		18.67	■□□□□ 0.58
PLD3-223	ENST00000600948	GABPA	Q06546	454 aa		18.67	■□□□□ 0.58
PLD3-223	ENST00000600948	SH3D19	Q5HYK7	790 aa		18.67	■□□□□ 0.58
PLD3-223	ENST00000600948	PROCA1	Q8NCQ7	364 aa	Predicted RBP	18.67	■□□□□ 0.58
PLD3-223	ENST00000600948	PUS7L	Q9H0K6	701 aa	Known RBP	18.67	■□□□□ 0.58
PLD3-223	ENST00000600948	GLRX3	O76003	335 aa	Known RBP	18.66	■□□□□ 0.58
PLD3-223	ENST00000600948	CYP2D6	P10635	497 aa		18.66	■□□□□ 0.58
PLD3-223	ENST00000600948	SHMT1	P34896	483 aa		18.66	■□□□□ 0.58
PLD3-223	ENST00000600948	HMGCS2	P54868	508 aa		18.66	■□□□□ 0.58
PLD3-223	ENST00000600948	LACTB	P83111	547 aa	Predicted RBP	18.66	■□□□□ 0.58
PLD3-223	ENST00000600948	TREML2	Q5T2D2	321 aa		18.66	■□□□□ 0.58
PLD3-223	ENST00000600948	ARHGAP39	Q9C0H5	1083 aa		18.66	■□□□□ 0.58
PLD3-223	ENST00000600948	ATP8A2	Q9NTI2	1148 aa		18.66	■□□□□ 0.58
PLD3-223	ENST00000600948	PTPN22	Q9Y2R2	807 aa		18.66	■□□□□ 0.58
PLD3-223	ENST00000600948	HTT	P42858	3142 aa		18.65	■□□□□ 0.58
PLD3-223	ENST00000600948	GH2	P01242	217 aa		18.65	■□□□□ 0.58
PLD3-223	ENST00000600948	BCR	P11274	1271 aa		18.65	■□□□□ 0.58
PLD3-223	ENST00000600948	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.65	■□□□□ 0.58
PLD3-223	ENST00000600948	RNF113A	O15541	343 aa	Known RBP	18.64	■□□□□ 0.57
PLD3-223	ENST00000600948	BACE1	P56817	501 aa		18.64	■□□□□ 0.57
PLD3-223	ENST00000600948	MTMR2	Q13614	643 aa		18.64	■□□□□ 0.57
PLD3-223	ENST00000600948	ARHGEF6	Q15052	776 aa		18.64	■□□□□ 0.57
PLD3-223	ENST00000600948	CERKL	Q49MI3	558 aa	Predicted RBP	18.64	■□□□□ 0.57
PLD3-223	ENST00000600948	SMC5	Q8IY18	1101 aa		18.64	■□□□□ 0.57
PLD3-223	ENST00000600948	APPBP2	Q92624	585 aa		18.64	■□□□□ 0.57
PLD3-223	ENST00000600948	OSBP2	Q969R2	916 aa		18.64	■□□□□ 0.57
PLD3-223	ENST00000600948	SLC4A4	Q9Y6R1	1079 aa		18.64	■□□□□ 0.57
PLD3-223	ENST00000600948	ZFY	P08048	801 aa	Predicted RBP	18.63	■□□□□ 0.57
PLD3-223	ENST00000600948	CTGF	P29279	349 aa		18.63	■□□□□ 0.57
PLD3-223	ENST00000600948	KIF22	Q14807	665 aa		18.63	■□□□□ 0.57
PLD3-223	ENST00000600948	ABCB5	Q2M3G0	1257 aa		18.63	■□□□□ 0.57
PLD3-223	ENST00000600948	STRBP	Q96SI9	672 aa	Known RBP	18.63	■□□□□ 0.57
PLD3-223	ENST00000600948	RWDD1	Q9H446	243 aa	Predicted RBP	18.63	■□□□□ 0.57
PLD3-223	ENST00000600948	STAP2	Q9UGK3	403 aa		18.63	■□□□□ 0.57
PLD3-223	ENST00000600948	C19orf81	C9J6K1	198 aa		18.62	■□□□□ 0.57
PLD3-223	ENST00000600948	USP17L10	C9JJH3	530 aa		18.62	■□□□□ 0.57
PLD3-223	ENST00000600948	IGHD	P01880	384 aa		18.62	■□□□□ 0.57
PLD3-223	ENST00000600948	RGS19	P49795	217 aa		18.62	■□□□□ 0.57
PLD3-223	ENST00000600948	SLC44A5	Q8NCS7	719 aa		18.62	■□□□□ 0.57
PLD3-223	ENST00000600948	PNMA3	Q9UL41	463 aa		18.62	■□□□□ 0.57
PLD3-223	ENST00000600948	TAOK2	Q9UL54	1235 aa		18.62	■□□□□ 0.57
PLD3-223	ENST00000600948	DOCK3	Q8IZD9	2030 aa		18.62	■□□□□ 0.57
PLD3-223	ENST00000600948	CYP2D7	A0A087X1C5	515 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	USP17L12	C9JPN9	530 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	USP17L21	D6R901	530 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	SMIM22	K7EJ46	135 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	GUCY1A2	P33402	732 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	PDE1A	P54750	535 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	C12orf60	Q5U649	245 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	DYNLL2	Q96FJ2	89 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	TRIM47	Q96LD4	638 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	SWAP70	Q9UH65	585 aa		18.61	■□□□□ 0.57
PLD3-223	ENST00000600948	GSG1L2	A8MUP6	293 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948		M0R2C6	588 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	ECM2	O94769	699 aa	Predicted RBP	18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	GNRH1	P01148	92 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	PSMC4	P43686	418 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	SOX10	P56693	466 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	RAB3GAP1	Q15042	981 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	CTR9	Q6PD62	1173 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	DDRGK1	Q96HY6	314 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	FSD1	Q9BTV5	496 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	LNPK	Q9C0E8	428 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	ASCC2	Q9H1I8	757 aa	Predicted RBP	18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	CABP5	Q9NP86	173 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	TMOD4	Q9NZQ9	345 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	PTCH2	Q9Y6C5	1203 aa		18.6	■□□□□ 0.57
PLD3-223	ENST00000600948	GPAA1	O43292	621 aa		18.59	■□□□□ 0.57
PLD3-223	ENST00000600948	C12orf42	Q96LP6	360 aa		18.59	■□□□□ 0.57
PLD3-223	ENST00000600948	EMILIN3	Q9NT22	766 aa		18.59	■□□□□ 0.57
PLD3-223	ENST00000600948	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.59	■□□□□ 0.57
PLD3-223	ENST00000600948	KIAA0100	Q14667	2235 aa	Known RBP	18.58	■□□□□ 0.57
PLD3-223	ENST00000600948	OSBP	P22059	807 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	HOXA7	P31268	230 aa	Predicted RBP	18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	SEPT2	Q15019	361 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	ZMYM1	Q5SVZ6	1142 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	B4GALNT3	Q6L9W6	998 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	GIMAP6	Q6P9H5	292 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	USP17L2	Q6R6M4	530 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	C16orf86	Q6ZW13	317 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	AMOTL1	Q8IY63	956 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	ANKRD13C	Q8N6S4	541 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	ACER1	Q8TDN7	264 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	ARMC5	Q96C12	935 aa		18.58	■□□□□ 0.56
PLD3-223	ENST00000600948	SEC62	Q99442	399 aa	Known RBP	18.58	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms