RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 SRGAP3O43295 1099 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 ASNSP08243 561 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 ZKSCAN1P17029 563 aaPredicted RBP15.2■□□□□ 0.02
HOMER3-211ENST00000599808 ARID4AP29374 1257 aaPredicted RBP15.2■□□□□ 0.02
HOMER3-211ENST00000599808 CCND3P30281 292 aaPredicted RBP15.2■□□□□ 0.02
HOMER3-211ENST00000599808 CCL14Q16627 93 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 SHROOM1Q2M3G4 852 aaPredicted RBP15.2■□□□□ 0.02
HOMER3-211ENST00000599808 Q3C1V9 767 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 LHX8Q68G74 356 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 CDCA7LQ96GN5 454 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 PORCNQ9H237 461 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 DNAJC18Q9H819 358 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 PI4KBQ9UBF8 816 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 RBPJLQ9UBG7 517 aa15.2■□□□□ 0.02
HOMER3-211ENST00000599808 VCANP13611 3396 aa15.19■□□□□ 0.02
HOMER3-211ENST00000599808 MAPK4P31152 587 aa15.19■□□□□ 0.02
HOMER3-211ENST00000599808 MCAMP43121 646 aa15.19■□□□□ 0.02
HOMER3-211ENST00000599808 ERVK-9P63128 1117 aa15.19■□□□□ 0.02
HOMER3-211ENST00000599808 ERVK-24P63145 666 aa15.19■□□□□ 0.02
HOMER3-211ENST00000599808 MDM2Q00987 491 aaPredicted RBP15.19■□□□□ 0.02
HOMER3-211ENST00000599808 PDE3AQ14432 1141 aa15.19■□□□□ 0.02
HOMER3-211ENST00000599808 MORN1Q5T089 497 aa15.19■□□□□ 0.02
HOMER3-211ENST00000599808 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
HOMER3-211ENST00000599808 POTEEQ6S8J3 1075 aa15.19■□□□□ 0.02
HOMER3-211ENST00000599808 TRMT44Q8IYL2 757 aaKnown RBP15.19■□□□□ 0.02
HOMER3-211ENST00000599808 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
HOMER3-211ENST00000599808 DHX36Q9H2U1 1008 aaKnown RBP15.19■□□□□ 0.02
HOMER3-211ENST00000599808 EYSQ5T1H1 3165 aa15.18■□□□□ 0.02
HOMER3-211ENST00000599808 C19orf81C9J6K1 198 aa15.18■□□□□ 0.02
HOMER3-211ENST00000599808 USP17L10C9JJH3 530 aa15.18■□□□□ 0.02
HOMER3-211ENST00000599808 RGS2P41220 211 aa15.18■□□□□ 0.02
HOMER3-211ENST00000599808 MTX1Q13505 466 aa15.18■□□□□ 0.02
HOMER3-211ENST00000599808 GPR142Q7Z601 462 aa15.18■□□□□ 0.02
HOMER3-211ENST00000599808 PAGR1Q9BTK6 254 aa15.18■□□□□ 0.02
HOMER3-211ENST00000599808 COL25A1Q9BXS0 654 aaPredicted RBP15.18■□□□□ 0.02
HOMER3-211ENST00000599808 AATFQ9NY61 560 aaKnown RBP eCLIP15.18■□□□□ 0.02
HOMER3-211ENST00000599808 LRP2BPQ9P2M1 347 aa15.18■□□□□ 0.02
HOMER3-211ENST00000599808 MYH1P12882 1939 aa15.17■□□□□ 0.02
HOMER3-211ENST00000599808 GDF11O95390 407 aa15.17■□□□□ 0.02
HOMER3-211ENST00000599808 PLEKHH3Q7Z736 793 aa15.17■□□□□ 0.02
HOMER3-211ENST00000599808 METTL16Q86W50 562 aaKnown RBP15.17■□□□□ 0.02
HOMER3-211ENST00000599808 MAPKAPK5Q8IW41 473 aa15.17■□□□□ 0.02
HOMER3-211ENST00000599808 CCAR1Q8IX12 1150 aaKnown RBP15.17■□□□□ 0.02
HOMER3-211ENST00000599808 TGFBRAP1Q8WUH2 860 aa15.17■□□□□ 0.02
HOMER3-211ENST00000599808 APBA2Q99767 749 aa15.17■□□□□ 0.02
HOMER3-211ENST00000599808 ZBTB21Q9ULJ3 1066 aa15.17■□□□□ 0.02
HOMER3-211ENST00000599808 LTBP2Q14767 1821 aa15.16■□□□□ 0.02
HOMER3-211ENST00000599808 POTEB2H3BUK9 544 aa15.16■□□□□ 0.02
HOMER3-211ENST00000599808 NAA16Q6N069 864 aaPredicted RBP15.16■□□□□ 0.02
HOMER3-211ENST00000599808 ADGRA1Q86SQ6 560 aa15.16■□□□□ 0.02
HOMER3-211ENST00000599808 FOXP4Q8IVH2 680 aaPredicted RBP15.16■□□□□ 0.02
HOMER3-211ENST00000599808 TRMT2AQ8IZ69 625 aaKnown RBP15.16■□□□□ 0.02
HOMER3-211ENST00000599808 GUCD1Q96NT3 240 aa15.16■□□□□ 0.02
HOMER3-211ENST00000599808 NOL10Q9BSC4 688 aaKnown RBP15.16■□□□□ 0.02
HOMER3-211ENST00000599808 EMILIN3Q9NT22 766 aa15.16■□□□□ 0.02
HOMER3-211ENST00000599808 PALD1Q9ULE6 856 aa15.16■□□□□ 0.02
HOMER3-211ENST00000599808 FLT1P17948 1338 aa15.16■□□□□ 0.02
HOMER3-211ENST00000599808 BAG3O95817 575 aa15.15■□□□□ 0.02
HOMER3-211ENST00000599808 GNAI3P08754 354 aa15.15■□□□□ 0.02
HOMER3-211ENST00000599808 UQCRFS1P1P0C7P4 283 aa15.15■□□□□ 0.02
HOMER3-211ENST00000599808 PLCG2P16885 1265 aa15.15■□□□□ 0.02
HOMER3-211ENST00000599808 PPP4CP60510 307 aa15.15■□□□□ 0.02
HOMER3-211ENST00000599808 FAM109BQ6ICB4 259 aaPredicted RBP15.15■□□□□ 0.02
HOMER3-211ENST00000599808 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.15■□□□□ 0.02
HOMER3-211ENST00000599808 CRACR2BQ8N4Y2 399 aaPredicted RBP15.15■□□□□ 0.02
HOMER3-211ENST00000599808 GTF3C2Q8WUA4 911 aaPredicted RBP15.15■□□□□ 0.02
HOMER3-211ENST00000599808 GINM1Q9NU53 330 aa15.15■□□□□ 0.02
HOMER3-211ENST00000599808 PRUNE2Q8WUY3 3088 aa15.14■□□□□ 0.01
HOMER3-211ENST00000599808 RLFQ13129 1914 aa15.14■□□□□ 0.01
HOMER3-211ENST00000599808 CT47B1P0C2W7 299 aaPredicted RBP15.14■□□□□ 0.01
HOMER3-211ENST00000599808 MAP2K5Q13163 448 aa15.14■□□□□ 0.01
HOMER3-211ENST00000599808 FAM161BQ96MY7 647 aa15.14■□□□□ 0.01
HOMER3-211ENST00000599808 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
HOMER3-211ENST00000599808 SENP6Q9GZR1 1112 aaPredicted RBP15.14■□□□□ 0.01
HOMER3-211ENST00000599808 SNRKQ9NRH2 765 aa15.14■□□□□ 0.01
HOMER3-211ENST00000599808 FLRT1Q9NZU1 646 aa15.14■□□□□ 0.01
HOMER3-211ENST00000599808 PNMA6EA0A0J9YXQ4 647 aa15.13■□□□□ 0.01
HOMER3-211ENST00000599808 CNMDO75829 334 aa15.13■□□□□ 0.01
HOMER3-211ENST00000599808 USP17L2Q6R6M4 530 aa15.13■□□□□ 0.01
HOMER3-211ENST00000599808 EDC3Q96F86 508 aaKnown RBP15.13■□□□□ 0.01
HOMER3-211ENST00000599808 CWC22Q9HCG8 908 aaKnown RBP15.13■□□□□ 0.01
HOMER3-211ENST00000599808 SAP30BPQ9UHR5 308 aaKnown RBP15.13■□□□□ 0.01
HOMER3-211ENST00000599808 NDUFB9Q9Y6M9 179 aa15.13■□□□□ 0.01
HOMER3-211ENST00000599808 SPTBN5Q9NRC6 3674 aaKnown RBP15.13■□□□□ 0.01
HOMER3-211ENST00000599808 CDH23Q9H251 3354 aa15.12■□□□□ 0.01
HOMER3-211ENST00000599808 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
HOMER3-211ENST00000599808 G3BP1Q13283 466 aaKnown RBP eCLIP15.12■□□□□ 0.01
HOMER3-211ENST00000599808 MFSD14CQ5VZR4 134 aa15.12■□□□□ 0.01
HOMER3-211ENST00000599808 C12orf42Q96LP6 360 aa15.12■□□□□ 0.01
HOMER3-211ENST00000599808 LBHD1Q9BQE6 289 aaPredicted RBP15.12■□□□□ 0.01
HOMER3-211ENST00000599808 RABGAP1Q9Y3P9 1069 aa15.12■□□□□ 0.01
HOMER3-211ENST00000599808 GH2P01242 217 aa15.11■□□□□ 0.01
HOMER3-211ENST00000599808 CYP2E1P05181 493 aaPredicted RBP15.11■□□□□ 0.01
HOMER3-211ENST00000599808 HLA-DOAP06340 250 aa15.11■□□□□ 0.01
HOMER3-211ENST00000599808 RARSP54136 660 aaKnown RBP15.11■□□□□ 0.01
HOMER3-211ENST00000599808 ATN1P54259 1190 aaPredicted RBP15.11■□□□□ 0.01
HOMER3-211ENST00000599808 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
HOMER3-211ENST00000599808 ARHGAP45Q92619 1136 aa15.11■□□□□ 0.01
HOMER3-211ENST00000599808 DDX20Q9UHI6 824 aaKnown RBP15.11■□□□□ 0.01
HOMER3-211ENST00000599808 SLC15A5A6NIM6 579 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms