RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 SAP30BPQ9UHR5 308 aaKnown RBP19.16■□□□□ 0.66
SMG9-208ENST00000598886 GJD2Q9UKL4 321 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 ZBTB21Q9ULJ3 1066 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 FRMPD3Q5JV73 1810 aa19.16■□□□□ 0.66
SMG9-208ENST00000598886 TRIOBPQ9H2D6 2365 aa19.15■□□□□ 0.66
SMG9-208ENST00000598886 H0YGN5 161 aa19.15■□□□□ 0.66
SMG9-208ENST00000598886 HOXA7P31268 230 aaPredicted RBP19.15■□□□□ 0.66
SMG9-208ENST00000598886 TATDN1Q6P1N9 297 aa19.15■□□□□ 0.66
SMG9-208ENST00000598886 NKX2-3Q8TAU0 364 aa19.15■□□□□ 0.66
SMG9-208ENST00000598886 U2AF1L4Q8WU68 220 aaKnown RBP19.15■□□□□ 0.66
SMG9-208ENST00000598886 RIOK1Q9BRS2 568 aaKnown RBP19.15■□□□□ 0.66
SMG9-208ENST00000598886 AS3MTQ9HBK9 375 aa19.15■□□□□ 0.66
SMG9-208ENST00000598886 GINM1Q9NU53 330 aa19.15■□□□□ 0.66
SMG9-208ENST00000598886 MYH8P13535 1937 aa19.15■□□□□ 0.66
SMG9-208ENST00000598886 RLFQ13129 1914 aa19.15■□□□□ 0.66
SMG9-208ENST00000598886 SZT2Q5T011 3432 aa19.15■□□□□ 0.66
SMG9-208ENST00000598886 A0A0G2JMZ2 1700 aa19.14■□□□□ 0.66
SMG9-208ENST00000598886 IDH1O75874 414 aaKnown RBP19.14■□□□□ 0.65
SMG9-208ENST00000598886 GDF11O95390 407 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 UBXN2AP68543 259 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 TMED8Q6PL24 325 aaPredicted RBP19.14■□□□□ 0.65
SMG9-208ENST00000598886 AACSQ86V21 672 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 ERC1Q8IUD2 1116 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 MIGA1Q8NAN2 632 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 RHPN1Q8TCX5 695 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 EHD4Q9H223 541 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 TXNRD2Q9NNW7 524 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 PARP14Q460N5 1801 aa19.14■□□□□ 0.65
SMG9-208ENST00000598886 PEX10O60683 326 aa19.13■□□□□ 0.65
SMG9-208ENST00000598886 SGPL1O95470 568 aa19.13■□□□□ 0.65
SMG9-208ENST00000598886 PABPC4Q13310 644 aaKnown RBP eCLIP19.13■□□□□ 0.65
SMG9-208ENST00000598886 CRISPLD2Q9H0B8 497 aa19.13■□□□□ 0.65
SMG9-208ENST00000598886 ZBTB40Q9NUA8 1239 aa19.13■□□□□ 0.65
SMG9-208ENST00000598886 COLQQ9Y215 455 aaPredicted RBP19.13■□□□□ 0.65
SMG9-208ENST00000598886 BAZ2AQ9UIF9 1905 aaKnown RBP19.12■□□□□ 0.65
SMG9-208ENST00000598886 FXR1P51114 621 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMG9-208ENST00000598886 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
SMG9-208ENST00000598886 P2RX7Q99572 595 aaKnown RBP19.12■□□□□ 0.65
SMG9-208ENST00000598886 IL1RAPL2Q9NP60 686 aa19.12■□□□□ 0.65
SMG9-208ENST00000598886 EMILIN3Q9NT22 766 aa19.12■□□□□ 0.65
SMG9-208ENST00000598886 C19orf81C9J6K1 198 aa19.11■□□□□ 0.65
SMG9-208ENST00000598886 CRACR2BQ8N4Y2 399 aaPredicted RBP19.11■□□□□ 0.65
SMG9-208ENST00000598886 COA7Q96BR5 231 aa19.11■□□□□ 0.65
SMG9-208ENST00000598886 C12orf42Q96LP6 360 aa19.11■□□□□ 0.65
SMG9-208ENST00000598886 BIN2Q9UBW5 565 aaPredicted RBP19.11■□□□□ 0.65
SMG9-208ENST00000598886 TCRBV5S4A2TA0A5A2 114 aa19.1■□□□□ 0.65
SMG9-208ENST00000598886 USP17L10C9JJH3 530 aa19.1■□□□□ 0.65
SMG9-208ENST00000598886 FARP2O94887 1054 aaPredicted RBP19.1■□□□□ 0.65
SMG9-208ENST00000598886 HLA-DOAP06340 250 aa19.1■□□□□ 0.65
SMG9-208ENST00000598886 HERVK_113P62684 666 aa19.1■□□□□ 0.65
SMG9-208ENST00000598886 EVX2Q03828 476 aa19.1■□□□□ 0.65
SMG9-208ENST00000598886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.1■□□□□ 0.65
SMG9-208ENST00000598886 PRO3102Q9H379 93 aa19.1■□□□□ 0.65
SMG9-208ENST00000598886 RBPJLQ9UBG7 517 aa19.1■□□□□ 0.65
SMG9-208ENST00000598886 GH2P01242 217 aa19.09■□□□□ 0.65
SMG9-208ENST00000598886 PDE6AP16499 860 aa19.09■□□□□ 0.65
SMG9-208ENST00000598886 SHMT1P34896 483 aa19.09■□□□□ 0.65
SMG9-208ENST00000598886 GABPAQ06546 454 aa19.09■□□□□ 0.65
SMG9-208ENST00000598886 MAP3K12Q12852 859 aa19.09■□□□□ 0.65
SMG9-208ENST00000598886 TRIM32Q13049 653 aa19.09■□□□□ 0.65
SMG9-208ENST00000598886 RPAP2Q8IXW5 612 aaPredicted RBP19.09■□□□□ 0.65
SMG9-208ENST00000598886 SERPINB13Q9UIV8 391 aa19.09■□□□□ 0.65
SMG9-208ENST00000598886 ZNF236Q9UL36 1845 aa19.09■□□□□ 0.65
SMG9-208ENST00000598886 GUCY1A2P33402 732 aa19.08■□□□□ 0.64
SMG9-208ENST00000598886 MNX1P50219 401 aaPredicted RBP19.08■□□□□ 0.64
SMG9-208ENST00000598886 PLCD1P51178 756 aa19.08■□□□□ 0.64
SMG9-208ENST00000598886 IRX3P78415 501 aaPredicted RBP19.08■□□□□ 0.64
SMG9-208ENST00000598886 HSP90AB4PQ58FF6 505 aa19.08■□□□□ 0.64
SMG9-208ENST00000598886 MAP3K21Q5TCX8 1036 aa19.08■□□□□ 0.64
SMG9-208ENST00000598886 TRIB2Q92519 343 aa19.08■□□□□ 0.64
SMG9-208ENST00000598886 USP6NLQ92738 828 aa19.08■□□□□ 0.64
SMG9-208ENST00000598886 DEFB118Q96PH6 123 aa19.08■□□□□ 0.64
SMG9-208ENST00000598886 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.08■□□□□ 0.64
SMG9-208ENST00000598886 TMOD4Q9NZQ9 345 aa19.08■□□□□ 0.64
SMG9-208ENST00000598886 COG6Q9Y2V7 657 aa19.08■□□□□ 0.64
SMG9-208ENST00000598886 CNMDO75829 334 aa19.07■□□□□ 0.64
SMG9-208ENST00000598886 HMGCRP04035 888 aa19.07■□□□□ 0.64
SMG9-208ENST00000598886 USP5P45974 858 aa19.07■□□□□ 0.64
SMG9-208ENST00000598886 Q3C1V9 767 aa19.07■□□□□ 0.64
SMG9-208ENST00000598886 KIF1BPQ96EK5 621 aa19.07■□□□□ 0.64
SMG9-208ENST00000598886 DDX19BQ9UMR2 479 aa19.07■□□□□ 0.64
SMG9-208ENST00000598886 GREB1LQ9C091 1923 aaPredicted RBP19.07■□□□□ 0.64
SMG9-208ENST00000598886 CAPN2P17655 700 aa19.06■□□□□ 0.64
SMG9-208ENST00000598886 USP17L2Q6R6M4 530 aa19.06■□□□□ 0.64
SMG9-208ENST00000598886 ACER1Q8TDN7 264 aa19.06■□□□□ 0.64
SMG9-208ENST00000598886 EDC3Q96F86 508 aaKnown RBP19.06■□□□□ 0.64
SMG9-208ENST00000598886 TRIM34Q9BYJ4 488 aa19.06■□□□□ 0.64
SMG9-208ENST00000598886 KIAA1683Q9H0B3 1180 aa19.06■□□□□ 0.64
SMG9-208ENST00000598886 PORCNQ9H237 461 aa19.06■□□□□ 0.64
SMG9-208ENST00000598886 ZNF532Q9HCE3 1301 aa19.05■□□□□ 0.64
SMG9-208ENST00000598886 MS4A1P11836 297 aa19.05■□□□□ 0.64
SMG9-208ENST00000598886 ERVK-9P63128 1117 aa19.05■□□□□ 0.64
SMG9-208ENST00000598886 ERVK-24P63145 666 aa19.05■□□□□ 0.64
SMG9-208ENST00000598886 TTF1Q15361 905 aaPredicted RBP19.05■□□□□ 0.64
SMG9-208ENST00000598886 SLC9C2Q5TAH2 1124 aa19.05■□□□□ 0.64
SMG9-208ENST00000598886 GPRC5AQ8NFJ5 357 aa19.05■□□□□ 0.64
SMG9-208ENST00000598886 DIS3LQ8TF46 1054 aaKnown RBP19.05■□□□□ 0.64
SMG9-208ENST00000598886 HTATIP2Q9BUP3 242 aa19.05■□□□□ 0.64
SMG9-208ENST00000598886 TAOK2Q9UL54 1235 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms