RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 ISCA1Q9BUE6 129 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 ANKRD2Q9GZV1 360 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 SERPINA10Q9UK55 444 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 DAGLAQ9Y4D2 1042 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 RPAP1Q9BWH6 1393 aaPredicted RBP5.71□□□□□ -1.5
HERC3-213ENST00000598772 DCHS1Q96JQ0 3298 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 ZBBXA8MT70 800 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 DCDC2CA8MYV0 355 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 KIAA0355O15063 1070 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 MAP3K13O43283 966 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 MSCO60682 206 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 KDM4AO75164 1064 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 TAF5LO75529 589 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 XRCC5P13010 732 aaKnown RBP5.71□□□□□ -1.5
HERC3-213ENST00000598772 HOXB3P14651 431 aaPredicted RBP5.71□□□□□ -1.5
HERC3-213ENST00000598772 CSF2RAP15509 400 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 CYP2C19P33261 490 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 C16orf59Q7L2K0 433 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 OTOP2Q7RTS6 562 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 LRP10Q7Z4F1 713 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 ADSSL1Q8N142 457 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 PLBD2Q8NHP8 589 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 SOCS4Q8WXH5 440 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 EDC3Q96F86 508 aaKnown RBP5.71□□□□□ -1.5
HERC3-213ENST00000598772 MPHOSPH8Q99549 860 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 MTIF3Q9H2K0 278 aaKnown RBP5.71□□□□□ -1.5
HERC3-213ENST00000598772 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.71□□□□□ -1.5
HERC3-213ENST00000598772 AGTPBP1Q9UPW5 1226 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 SLC45A1Q9Y2W3 748 aa5.71□□□□□ -1.5
HERC3-213ENST00000598772 AK9Q5TCS8 1911 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 ZIC2O95409 532 aaPredicted RBP5.7□□□□□ -1.5
HERC3-213ENST00000598772 TIMP1P01033 207 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 FGBP02675 491 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 CHAF1AQ13111 956 aaPredicted RBP5.7□□□□□ -1.5
HERC3-213ENST00000598772 CC2D1BQ5T0F9 858 aaKnown RBP5.7□□□□□ -1.5
HERC3-213ENST00000598772 GPRC5AQ8NFJ5 357 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 VTI1AQ96AJ9 217 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 PAGR1Q9BTK6 254 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 UPF3BQ9BZI7 483 aaKnown RBP5.7□□□□□ -1.5
HERC3-213ENST00000598772 PPP1R12CQ9BZL4 782 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 IRF2BPLQ9H1B7 796 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 GREM2Q9H772 168 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 UBE2ZQ9H832 354 aaPredicted RBP5.7□□□□□ -1.5
HERC3-213ENST00000598772 SH2B1Q9NRF2 756 aaPredicted RBP5.7□□□□□ -1.5
HERC3-213ENST00000598772 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.7□□□□□ -1.5
HERC3-213ENST00000598772 MUTYHQ9UIF7 546 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 TSPYL4Q9UJ04 414 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 AFG3L2Q9Y4W6 797 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 LRRFIP2Q9Y608 721 aaKnown RBP5.7□□□□□ -1.5
HERC3-213ENST00000598772 ZNF536O15090 1300 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 MAST2Q6P0Q8 1798 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 SPTBN2O15020 2390 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 ZFHX4Q86UP3 3567 aa5.7□□□□□ -1.5
HERC3-213ENST00000598772 ECM29Q5VYK3 1845 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 FLNBO75369 2602 aaKnown RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 MAP1BP46821 2468 aaKnown RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 BRWD1Q9NSI6 2320 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 CACNA1HO95180 2353 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 GPR179Q6PRD1 2367 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 PRR23AA6NEV1 266 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 TMEM221A6NGB7 291 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 EPOPA6NHQ4 379 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 M0R296 226 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 HTATSF1O43719 755 aaKnown RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 FRAT2O75474 233 aaPredicted RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 SLC5A1P13866 664 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 PTPRAP18433 802 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 FKBP1AP62942 108 aaKnown RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 IRX3P78415 501 aaPredicted RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 FAAP100Q0VG06 881 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 PABPC4Q13310 644 aaKnown RBP eCLIP5.69□□□□□ -1.5
HERC3-213ENST00000598772 LRRC41Q15345 812 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 MFSD5Q6N075 450 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 PSRC1Q6PGN9 363 aaPredicted RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 PLEKHH3Q7Z736 793 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 ZSCAN29Q8IWY8 852 aaPredicted RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 SCYL3Q8IZE3 742 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 TMEM199Q8N511 208 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 TRPV1Q8NER1 839 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 KCNG4Q8TDN1 519 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 RMDN1Q96DB5 314 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 APBA2Q99767 749 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 MYD88Q99836 296 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 RSPH6AQ9H0K4 717 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 ASCC2Q9H1I8 757 aaPredicted RBP5.69□□□□□ -1.5
HERC3-213ENST00000598772 FLRT1Q9NZU1 646 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 ZNF112Q9UJU3 913 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 SLC4A7Q9Y6M7 1214 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 ZNF292O60281 2723 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 COL4A6Q14031 1691 aa5.69□□□□□ -1.5
HERC3-213ENST00000598772 ATRNL1Q5VV63 1379 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 H3BQ06 376 aaPredicted RBP5.68□□□□□ -1.5
HERC3-213ENST00000598772 CA3P07451 260 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 IL1R1P14778 569 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 MAPK4P31152 587 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 HMGCS2P54868 508 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 CTSWP56202 376 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 CHRNDQ07001 517 aa5.68□□□□□ -1.5
HERC3-213ENST00000598772 SPP2Q13103 211 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms