RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 SHROOM1Q2M3G4 852 aaPredicted RBP20.23■□□□□ 0.83
C19orf54-207ENST00000597507 GPR142Q7Z601 462 aa20.23■□□□□ 0.83
C19orf54-207ENST00000597507 TMOD4Q9NZQ9 345 aa20.23■□□□□ 0.83
C19orf54-207ENST00000597507 CDH23Q9H251 3354 aa20.23■□□□□ 0.83
C19orf54-207ENST00000597507 ERVK-9P63128 1117 aa20.22■□□□□ 0.83
C19orf54-207ENST00000597507 ERVK-24P63145 666 aa20.22■□□□□ 0.83
C19orf54-207ENST00000597507 TFCP2Q12800 502 aa20.22■□□□□ 0.83
C19orf54-207ENST00000597507 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
C19orf54-207ENST00000597507 PI4KBQ9UBF8 816 aa20.22■□□□□ 0.83
C19orf54-207ENST00000597507 RGS2P41220 211 aa20.21■□□□□ 0.83
C19orf54-207ENST00000597507 GSTO1P78417 241 aa20.21■□□□□ 0.83
C19orf54-207ENST00000597507 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
C19orf54-207ENST00000597507 TEX11Q8IYF3 940 aa20.21■□□□□ 0.83
C19orf54-207ENST00000597507 SH3RF3Q8TEJ3 882 aaPredicted RBP20.21■□□□□ 0.83
C19orf54-207ENST00000597507 SENP6Q9GZR1 1112 aaPredicted RBP20.21■□□□□ 0.83
C19orf54-207ENST00000597507 C19orf81C9J6K1 198 aa20.2■□□□□ 0.82
C19orf54-207ENST00000597507 ASNSP08243 561 aa20.2■□□□□ 0.82
C19orf54-207ENST00000597507 PLEKHH3Q7Z736 793 aa20.2■□□□□ 0.82
C19orf54-207ENST00000597507 SPATA5Q8NB90 893 aa20.2■□□□□ 0.82
C19orf54-207ENST00000597507 LBHD1Q9BQE6 289 aaPredicted RBP20.2■□□□□ 0.82
C19orf54-207ENST00000597507 PAGR1Q9BTK6 254 aa20.2■□□□□ 0.82
C19orf54-207ENST00000597507 DNAJC18Q9H819 358 aa20.2■□□□□ 0.82
C19orf54-207ENST00000597507 RAI14Q9P0K7 980 aa20.2■□□□□ 0.82
C19orf54-207ENST00000597507 MAST2Q6P0Q8 1798 aa20.19■□□□□ 0.82
C19orf54-207ENST00000597507 USP17L10C9JJH3 530 aa20.19■□□□□ 0.82
C19orf54-207ENST00000597507 CCAR1Q8IX12 1150 aaKnown RBP20.19■□□□□ 0.82
C19orf54-207ENST00000597507 NEUROD6Q96NK8 337 aa20.19■□□□□ 0.82
C19orf54-207ENST00000597507 APBA2Q99767 749 aa20.19■□□□□ 0.82
C19orf54-207ENST00000597507 EMILIN3Q9NT22 766 aa20.19■□□□□ 0.82
C19orf54-207ENST00000597507 FLRT1Q9NZU1 646 aa20.19■□□□□ 0.82
C19orf54-207ENST00000597507 AKAP2Q9Y2D5 859 aa20.19■□□□□ 0.82
C19orf54-207ENST00000597507 CDK5RAP2Q96SN8 1893 aa20.18■□□□□ 0.82
C19orf54-207ENST00000597507 GDF11O95390 407 aa20.18■□□□□ 0.82
C19orf54-207ENST00000597507 ATN1P54259 1190 aaPredicted RBP20.18■□□□□ 0.82
C19orf54-207ENST00000597507 ALDH1L2Q3SY69 923 aa20.18■□□□□ 0.82
C19orf54-207ENST00000597507 METTL16Q86W50 562 aaKnown RBP20.18■□□□□ 0.82
C19orf54-207ENST00000597507 CDX2Q99626 313 aaPredicted RBP20.18■□□□□ 0.82
C19orf54-207ENST00000597507 DHX36Q9H2U1 1008 aaKnown RBP20.18■□□□□ 0.82
C19orf54-207ENST00000597507 NDUFB9Q9Y6M9 179 aa20.18■□□□□ 0.82
C19orf54-207ENST00000597507 ANP32CO43423 234 aa20.17■□□□□ 0.82
C19orf54-207ENST00000597507 MAP2K5Q13163 448 aa20.17■□□□□ 0.82
C19orf54-207ENST00000597507 ZNF697Q5TEC3 545 aa20.17■□□□□ 0.82
C19orf54-207ENST00000597507 EDC3Q96F86 508 aaKnown RBP20.17■□□□□ 0.82
C19orf54-207ENST00000597507 MEIS3Q99687 375 aa20.17■□□□□ 0.82
C19orf54-207ENST00000597507 SMC4Q9NTJ3 1288 aa20.17■□□□□ 0.82
C19orf54-207ENST00000597507 TTC28Q96AY4 2481 aa20.17■□□□□ 0.82
C19orf54-207ENST00000597507 LTBP2Q14767 1821 aa20.16■□□□□ 0.82
C19orf54-207ENST00000597507 CNMDO75829 334 aa20.16■□□□□ 0.82
C19orf54-207ENST00000597507 FOXP4Q8IVH2 680 aaPredicted RBP20.16■□□□□ 0.82
C19orf54-207ENST00000597507 SEMA6BQ9H3T3 888 aa20.16■□□□□ 0.82
C19orf54-207ENST00000597507 AATFQ9NY61 560 aaKnown RBP eCLIP20.16■□□□□ 0.82
C19orf54-207ENST00000597507 ZBTB21Q9ULJ3 1066 aa20.16■□□□□ 0.82
C19orf54-207ENST00000597507 E9PSI1 815 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 ARID4AP29374 1257 aaPredicted RBP20.15■□□□□ 0.82
C19orf54-207ENST00000597507 MCAMP43121 646 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 SLFN5Q08AF3 891 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 SHHQ15465 462 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 MAPKAPK5Q8IW41 473 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 GTF3C2Q8WUA4 911 aaPredicted RBP20.15■□□□□ 0.82
C19orf54-207ENST00000597507 TGFBRAP1Q8WUH2 860 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 LRP2BPQ9P2M1 347 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 DDX20Q9UHI6 824 aaKnown RBP20.15■□□□□ 0.82
C19orf54-207ENST00000597507 PALD1Q9ULE6 856 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 NOB1Q9ULX3 412 aaKnown RBP20.15■□□□□ 0.82
C19orf54-207ENST00000597507 HDAC5Q9UQL6 1122 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 RLFQ13129 1914 aa20.15■□□□□ 0.82
C19orf54-207ENST00000597507 MYO5AQ9Y4I1 1855 aaKnown RBP20.14■□□□□ 0.81
C19orf54-207ENST00000597507 FOCADQ5VW36 1801 aa20.14■□□□□ 0.81
C19orf54-207ENST00000597507 SRGAP3O43295 1099 aa20.14■□□□□ 0.81
C19orf54-207ENST00000597507 RTP1P59025 263 aa20.14■□□□□ 0.81
C19orf54-207ENST00000597507 GORABQ5T7V8 394 aa20.14■□□□□ 0.81
C19orf54-207ENST00000597507 MFSD14CQ5VZR4 134 aa20.14■□□□□ 0.81
C19orf54-207ENST00000597507 LPAR1Q92633 364 aa20.14■□□□□ 0.81
C19orf54-207ENST00000597507 GINM1Q9NU53 330 aa20.14■□□□□ 0.81
C19orf54-207ENST00000597507 RABGAP1Q9Y3P9 1069 aa20.14■□□□□ 0.81
C19orf54-207ENST00000597507 CNGA1P29973 690 aa20.13■□□□□ 0.81
C19orf54-207ENST00000597507 PPP4CP60510 307 aa20.13■□□□□ 0.81
C19orf54-207ENST00000597507 C9orf50Q5SZB4 431 aa20.13■□□□□ 0.81
C19orf54-207ENST00000597507 USP17L2Q6R6M4 530 aa20.13■□□□□ 0.81
C19orf54-207ENST00000597507 ADGRA1Q86SQ6 560 aa20.13■□□□□ 0.81
C19orf54-207ENST00000597507 CRACR2BQ8N4Y2 399 aaPredicted RBP20.13■□□□□ 0.81
C19orf54-207ENST00000597507 TRPV1Q8NER1 839 aa20.13■□□□□ 0.81
C19orf54-207ENST00000597507 MAFAQ8NHW3 353 aaPredicted RBP20.13■□□□□ 0.81
C19orf54-207ENST00000597507 CWC22Q9HCG8 908 aaKnown RBP20.13■□□□□ 0.81
C19orf54-207ENST00000597507 MUC3AQ02505 3323 aa20.13■□□□□ 0.81
C19orf54-207ENST00000597507 FLT1P17948 1338 aa20.12■□□□□ 0.81
C19orf54-207ENST00000597507 DNM1LO00429 736 aa20.12■□□□□ 0.81
C19orf54-207ENST00000597507 BAG3O95817 575 aa20.12■□□□□ 0.81
C19orf54-207ENST00000597507 PTPREP23469 700 aa20.12■□□□□ 0.81
C19orf54-207ENST00000597507 NPLOC4Q8TAT6 608 aa20.12■□□□□ 0.81
C19orf54-207ENST00000597507 NOL10Q9BSC4 688 aaKnown RBP20.12■□□□□ 0.81
C19orf54-207ENST00000597507 PRDM6Q9NQX0 595 aa20.12■□□□□ 0.81
C19orf54-207ENST00000597507 PRKAG2Q9UGJ0 569 aa20.12■□□□□ 0.81
C19orf54-207ENST00000597507 SLC15A5A6NIM6 579 aa20.11■□□□□ 0.81
C19orf54-207ENST00000597507 CYP2C19P33261 490 aa20.11■□□□□ 0.81
C19orf54-207ENST00000597507 ATP2B2Q01814 1243 aa20.11■□□□□ 0.81
C19orf54-207ENST00000597507 WDR78Q5VTH9 848 aa20.11■□□□□ 0.81
C19orf54-207ENST00000597507 NAA16Q6N069 864 aaPredicted RBP20.11■□□□□ 0.81
C19orf54-207ENST00000597507 MYLIPQ8WY64 445 aa20.11■□□□□ 0.81
C19orf54-207ENST00000597507 CDCA7LQ96GN5 454 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms