RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 SUPT20HQ8NEM7 779 aa10.13□□□□□ -0.79
LINC00343-204ENST00000596398 TMX4Q9H1E5 349 aaPredicted RBP10.13□□□□□ -0.79
LINC00343-204ENST00000596398 GGA3Q9NZ52 723 aa10.13□□□□□ -0.79
LINC00343-204ENST00000596398 TRIM17Q9Y577 477 aa10.13□□□□□ -0.79
LINC00343-204ENST00000596398 UBN2Q6ZU65 1347 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 KRBA1A5PL33 1030 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 GNAT3A8MTJ3 354 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 UBE2Q2LH0YL09 131 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 ADAM23O75077 832 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 INHAP05111 366 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 TM4SF4P48230 202 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 NOM1Q5C9Z4 860 aaKnown RBP10.12□□□□□ -0.79
LINC00343-204ENST00000596398 SUSD4Q5VX71 490 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 NGEFQ8N5V2 710 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 DPF2Q92785 391 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 KCNQ5Q9NR82 932 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 GGA1Q9UJY5 639 aa10.12□□□□□ -0.79
LINC00343-204ENST00000596398 SCAF8Q9UPN6 1271 aaKnown RBP10.12□□□□□ -0.79
LINC00343-204ENST00000596398 ABCC4O15439 1325 aa10.11□□□□□ -0.79
LINC00343-204ENST00000596398 SPTBN5Q9NRC6 3674 aaKnown RBP10.11□□□□□ -0.79
LINC00343-204ENST00000596398 TAF1P21675 1872 aa10.11□□□□□ -0.79
LINC00343-204ENST00000596398 AMPD1P23109 780 aa10.11□□□□□ -0.79
LINC00343-204ENST00000596398 KIF4BQ2VIQ3 1234 aa10.11□□□□□ -0.79
LINC00343-204ENST00000596398 FIGNL1Q6PIW4 674 aa10.11□□□□□ -0.79
LINC00343-204ENST00000596398 OTOP1Q7RTM1 612 aa10.11□□□□□ -0.79
LINC00343-204ENST00000596398 PANK3Q9H999 370 aa10.11□□□□□ -0.79
LINC00343-204ENST00000596398 DNAAF2Q9NVR5 837 aaKnown RBP10.11□□□□□ -0.79
LINC00343-204ENST00000596398 EYSQ5T1H1 3165 aa10.11□□□□□ -0.79
LINC00343-204ENST00000596398 DUOX1Q9NRD9 1551 aa10.1□□□□□ -0.79
LINC00343-204ENST00000596398 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
LINC00343-204ENST00000596398 ATP4AP20648 1035 aa10.1□□□□□ -0.79
LINC00343-204ENST00000596398 COL8A1P27658 744 aa10.1□□□□□ -0.79
LINC00343-204ENST00000596398 ABL2P42684 1182 aa10.1□□□□□ -0.79
LINC00343-204ENST00000596398 MAP7D1Q3KQU3 841 aa10.1□□□□□ -0.79
LINC00343-204ENST00000596398 ALYREFQ86V81 257 aaKnown RBP10.1□□□□□ -0.79
LINC00343-204ENST00000596398 PLPP7Q8NBV4 271 aa10.1□□□□□ -0.79
LINC00343-204ENST00000596398 C1orf216Q8TAB5 229 aa10.1□□□□□ -0.79
LINC00343-204ENST00000596398 NIFKQ9BYG3 293 aaKnown RBP10.1□□□□□ -0.79
LINC00343-204ENST00000596398 ZCCHC2Q9C0B9 1178 aaKnown RBP10.1□□□□□ -0.79
LINC00343-204ENST00000596398 DBNDD1Q9H9R9 158 aa10.1□□□□□ -0.79
LINC00343-204ENST00000596398 PCDHGC4Q9Y5F7 938 aa10.1□□□□□ -0.79
LINC00343-204ENST00000596398 NTSR2O95665 410 aa10.09□□□□□ -0.79
LINC00343-204ENST00000596398 HOXB4P17483 251 aaPredicted RBP10.09□□□□□ -0.79
LINC00343-204ENST00000596398 SMTNP53814 917 aa10.09□□□□□ -0.79
LINC00343-204ENST00000596398 ANGEL2Q5VTE6 544 aaKnown RBP10.09□□□□□ -0.79
LINC00343-204ENST00000596398 PRAMEF18Q5VWM3 479 aa10.09□□□□□ -0.79
LINC00343-204ENST00000596398 TTLL7Q6ZT98 887 aa10.09□□□□□ -0.79
LINC00343-204ENST00000596398 SP8Q8IXZ3 490 aa10.09□□□□□ -0.79
LINC00343-204ENST00000596398 CEMIPQ8WUJ3 1361 aa10.09□□□□□ -0.79
LINC00343-204ENST00000596398 LAMB2P55268 1798 aa10.09□□□□□ -0.79
LINC00343-204ENST00000596398 LAMA2P24043 3122 aaKnown RBP10.08□□□□□ -0.8
LINC00343-204ENST00000596398 ARAFP10398 606 aa10.08□□□□□ -0.8
LINC00343-204ENST00000596398 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
LINC00343-204ENST00000596398 TPRNQ4KMQ1 711 aa10.08□□□□□ -0.8
LINC00343-204ENST00000596398 LINC00114Q6XXX2 140 aa10.08□□□□□ -0.8
LINC00343-204ENST00000596398 NLRP8Q86W28 1048 aa10.08□□□□□ -0.8
LINC00343-204ENST00000596398 PTPN22Q9Y2R2 807 aa10.08□□□□□ -0.8
LINC00343-204ENST00000596398 RTL9Q8NET4 1388 aa10.08□□□□□ -0.8
LINC00343-204ENST00000596398 IBTKQ9P2D0 1353 aaPredicted RBP10.07□□□□□ -0.8
LINC00343-204ENST00000596398 EPXP11678 715 aa10.07□□□□□ -0.8
LINC00343-204ENST00000596398 FKBP1BP68106 108 aa10.07□□□□□ -0.8
LINC00343-204ENST00000596398 CAP1Q01518 475 aa10.07□□□□□ -0.8
LINC00343-204ENST00000596398 ARMC5Q96C12 935 aa10.07□□□□□ -0.8
LINC00343-204ENST00000596398 SERTAD1Q9UHV2 236 aa10.07□□□□□ -0.8
LINC00343-204ENST00000596398 MAP3K15Q6ZN16 1313 aa10.07□□□□□ -0.8
LINC00343-204ENST00000596398 SCN9AQ15858 1988 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 NEURL1BA8MQ27 555 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 ERVV-1B6SEH8 477 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 ATXN7O15265 892 aaPredicted RBP10.06□□□□□ -0.8
LINC00343-204ENST00000596398 BBOX1O75936 387 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 RPS12P25398 132 aaKnown RBP10.06□□□□□ -0.8
LINC00343-204ENST00000596398 SREBF2Q12772 1141 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 SEMA3FQ13275 785 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 GRIN2CQ14957 1233 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 ZNF34Q8IZ26 560 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 CD99L2Q8TCZ2 262 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 BTBD6Q96KE9 485 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 SUV39H2Q9H5I1 410 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 PITPNM2Q9BZ72 1349 aa10.06□□□□□ -0.8
LINC00343-204ENST00000596398 SOX1O00570 391 aaPredicted RBP10.05□□□□□ -0.8
LINC00343-204ENST00000596398 ECE2O60344 883 aa10.05□□□□□ -0.8
LINC00343-204ENST00000596398 DIAPH1O60610 1272 aaKnown RBP10.05□□□□□ -0.8
LINC00343-204ENST00000596398 ZNF295-AS1Q8N0V1 137 aa10.05□□□□□ -0.8
LINC00343-204ENST00000596398 GAS2L2Q8NHY3 880 aa10.05□□□□□ -0.8
LINC00343-204ENST00000596398 RRP7AQ9Y3A4 280 aaKnown RBP10.05□□□□□ -0.8
LINC00343-204ENST00000596398 PRUNE2Q8WUY3 3088 aa10.05□□□□□ -0.8
LINC00343-204ENST00000596398 LAMB4A4D0S4 1761 aa10.04□□□□□ -0.8
LINC00343-204ENST00000596398 ANKRD36CQ5JPF3 1778 aa10.04□□□□□ -0.8
LINC00343-204ENST00000596398 KDM3BQ7LBC6 1761 aa10.04□□□□□ -0.8
LINC00343-204ENST00000596398 A0A1W2PNR3 127 aa10.04□□□□□ -0.8
LINC00343-204ENST00000596398 TMEM229AB2RXF0 380 aa10.04□□□□□ -0.8
LINC00343-204ENST00000596398 HCLS1P14317 486 aaPredicted RBP10.04□□□□□ -0.8
LINC00343-204ENST00000596398 MYL6BP14649 208 aa10.04□□□□□ -0.8
LINC00343-204ENST00000596398 SOX11P35716 441 aa10.04□□□□□ -0.8
LINC00343-204ENST00000596398 PTPN12Q05209 780 aaKnown RBP10.04□□□□□ -0.8
LINC00343-204ENST00000596398 ARSJQ5FYB0 599 aaPredicted RBP10.04□□□□□ -0.8
LINC00343-204ENST00000596398 KIF6Q6ZMV9 814 aa10.04□□□□□ -0.8
LINC00343-204ENST00000596398 MCM10Q7L590 875 aa10.04□□□□□ -0.8
LINC00343-204ENST00000596398 ZNF333Q96JL9 665 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms