RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 NOGQ13253 232 aa23■■□□□ 1.27
PNKP-207ENST00000596014 CASC1Q6TDU7 716 aa23■■□□□ 1.27
PNKP-207ENST00000596014 OTUD5Q96G74 571 aa23■■□□□ 1.27
PNKP-207ENST00000596014 AOC2O75106 756 aa23■■□□□ 1.27
PNKP-207ENST00000596014 ZBTB48P10074 688 aaPredicted RBP23■■□□□ 1.27
PNKP-207ENST00000596014 PTPRAP18433 802 aa23■■□□□ 1.27
PNKP-207ENST00000596014 GJA5P36382 358 aa23■■□□□ 1.27
PNKP-207ENST00000596014 MKRN3Q13064 507 aaKnown RBP23■■□□□ 1.27
PNKP-207ENST00000596014 ZIC5Q96T25 663 aa23■■□□□ 1.27
PNKP-207ENST00000596014 ASNSP08243 561 aa22.99■■□□□ 1.27
PNKP-207ENST00000596014 PTH1RQ03431 593 aa22.99■■□□□ 1.27
PNKP-207ENST00000596014 PPATQ06203 517 aa22.99■■□□□ 1.27
PNKP-207ENST00000596014 SHROOM1Q2M3G4 852 aaPredicted RBP22.99■■□□□ 1.27
PNKP-207ENST00000596014 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.99■■□□□ 1.27
PNKP-207ENST00000596014 ANAPC4Q9UJX5 808 aa22.99■■□□□ 1.27
PNKP-207ENST00000596014 SLC3A2P08195 630 aaKnown RBP22.98■■□□□ 1.27
PNKP-207ENST00000596014 MAP2K2P36507 400 aa22.98■■□□□ 1.27
PNKP-207ENST00000596014 GINM1Q9NU53 330 aa22.98■■□□□ 1.27
PNKP-207ENST00000596014 PHIPQ8WWQ0 1821 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 GH2P01242 217 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 KIF23Q02241 960 aaPredicted RBP22.97■■□□□ 1.27
PNKP-207ENST00000596014 CTDSPL2Q05D32 466 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 ABCB5Q2M3G0 1257 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 MKNK2Q9HBH9 465 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 ZBTB21Q9ULJ3 1066 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 ZHX2Q9Y6X8 837 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 IRF6O14896 467 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 PPIL2Q13356 520 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 KIAA1211Q6ZU35 1233 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 CCDC84Q86UT8 332 aaPredicted RBP22.97■■□□□ 1.27
PNKP-207ENST00000596014 ZNF287Q9HBT7 754 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 CTNNA3Q9UI47 895 aa22.97■■□□□ 1.27
PNKP-207ENST00000596014 RBM19Q9Y4C8 960 aaKnown RBP22.97■■□□□ 1.27
PNKP-207ENST00000596014 HAND2P61296 217 aa22.96■■□□□ 1.27
PNKP-207ENST00000596014 PDE4BQ07343 736 aa22.96■■□□□ 1.27
PNKP-207ENST00000596014 CCDC17Q96LX7 622 aa22.96■■□□□ 1.27
PNKP-207ENST00000596014 CABP5Q9NP86 173 aa22.96■■□□□ 1.27
PNKP-207ENST00000596014 USP17L5A8MUK1 530 aa22.95■■□□□ 1.26
PNKP-207ENST00000596014 ZNF213O14771 459 aa22.95■■□□□ 1.26
PNKP-207ENST00000596014 PRDM1O75626 825 aa22.95■■□□□ 1.26
PNKP-207ENST00000596014 RASA1P20936 1047 aa22.95■■□□□ 1.26
PNKP-207ENST00000596014 MAP4K1Q92918 833 aa22.95■■□□□ 1.26
PNKP-207ENST00000596014 AFG3L2Q9Y4W6 797 aa22.95■■□□□ 1.26
PNKP-207ENST00000596014 LAMA4Q16363 1823 aa22.95■■□□□ 1.26
PNKP-207ENST00000596014 THSD7BQ9C0I4 1608 aa22.95■■□□□ 1.26
PNKP-207ENST00000596014 MPHOSPH10O00566 681 aaKnown RBP22.94■■□□□ 1.26
PNKP-207ENST00000596014 AKR1B1P15121 316 aa22.94■■□□□ 1.26
PNKP-207ENST00000596014 LSG1Q9H089 658 aaKnown RBP22.94■■□□□ 1.26
PNKP-207ENST00000596014 INCENPQ9NQS7 918 aa22.94■■□□□ 1.26
PNKP-207ENST00000596014 MS4A4AQ96JQ5 239 aa22.93■■□□□ 1.26
PNKP-207ENST00000596014 NBPF3Q9H094 633 aa22.93■■□□□ 1.26
PNKP-207ENST00000596014 ANO2Q9NQ90 1003 aa22.93■■□□□ 1.26
PNKP-207ENST00000596014 KCNH4Q9UQ05 1017 aa22.93■■□□□ 1.26
PNKP-207ENST00000596014 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.93■■□□□ 1.26
PNKP-207ENST00000596014 TACC3Q9Y6A5 838 aa22.93■■□□□ 1.26
PNKP-207ENST00000596014 MANSC4A6NHS7 340 aaPredicted RBP22.93■■□□□ 1.26
PNKP-207ENST00000596014 FGRP09769 529 aa22.93■■□□□ 1.26
PNKP-207ENST00000596014 GUCY1A2P33402 732 aa22.93■■□□□ 1.26
PNKP-207ENST00000596014 RAB3GAP1Q15042 981 aa22.93■■□□□ 1.26
PNKP-207ENST00000596014 IMMTQ16891 758 aaKnown RBP22.93■■□□□ 1.26
PNKP-207ENST00000596014 ZNF444Q8N0Y2 327 aaPredicted RBP22.93■■□□□ 1.26
PNKP-207ENST00000596014 U3KPZ7 1027 aaPredicted RBP22.93■■□□□ 1.26
PNKP-207ENST00000596014 GTF2A2P52657 109 aa22.92■■□□□ 1.26
PNKP-207ENST00000596014 SPP2Q13103 211 aa22.92■■□□□ 1.26
PNKP-207ENST00000596014 SEPT2Q15019 361 aa22.92■■□□□ 1.26
PNKP-207ENST00000596014 TMEM179Q6ZVK1 233 aa22.92■■□□□ 1.26
PNKP-207ENST00000596014 REM2Q8IYK8 340 aaPredicted RBP22.92■■□□□ 1.26
PNKP-207ENST00000596014 JMYQ8N9B5 988 aa22.92■■□□□ 1.26
PNKP-207ENST00000596014 ZNF280CQ8ND82 737 aa22.92■■□□□ 1.26
PNKP-207ENST00000596014 WDR18Q9BV38 432 aa22.92■■□□□ 1.26
PNKP-207ENST00000596014 TBC1D2Q9BYX2 928 aa22.92■■□□□ 1.26
PNKP-207ENST00000596014 AS3MTQ9HBK9 375 aa22.92■■□□□ 1.26
PNKP-207ENST00000596014 PTPRFP10586 1907 aa22.91■■□□□ 1.26
PNKP-207ENST00000596014 CXCL11O14625 94 aa22.91■■□□□ 1.26
PNKP-207ENST00000596014 SNAPC2Q13487 334 aa22.91■■□□□ 1.26
PNKP-207ENST00000596014 AKNAD1Q5T1N1 836 aa22.91■■□□□ 1.26
PNKP-207ENST00000596014 TBC1D10CQ8IV04 446 aa22.91■■□□□ 1.26
PNKP-207ENST00000596014 TRIM75PA6NK02 468 aa22.9■■□□□ 1.26
PNKP-207ENST00000596014 ORC4O43929 436 aa22.9■■□□□ 1.26
PNKP-207ENST00000596014 TM4SF4P48230 202 aa22.9■■□□□ 1.26
PNKP-207ENST00000596014 INHBEP58166 350 aa22.9■■□□□ 1.26
PNKP-207ENST00000596014 MFSD6Q6ZSS7 791 aa22.9■■□□□ 1.26
PNKP-207ENST00000596014 STAG1Q8WVM7 1258 aa22.9■■□□□ 1.26
PNKP-207ENST00000596014 RBM8AQ9Y5S9 174 aaKnown RBP22.9■■□□□ 1.26
PNKP-207ENST00000596014 PCP11498 1178 aaKnown RBP22.9■■□□□ 1.26
PNKP-207ENST00000596014 SREBF2Q12772 1141 aa22.9■■□□□ 1.26
PNKP-207ENST00000596014 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.9■■□□□ 1.26
PNKP-207ENST00000596014 GREB1LQ9C091 1923 aaPredicted RBP22.89■■□□□ 1.26
PNKP-207ENST00000596014 CCL15-CCL14A0A0B4J2E2 113 aa22.89■■□□□ 1.25
PNKP-207ENST00000596014 TESPA1A2RU30 521 aaPredicted RBP22.89■■□□□ 1.25
PNKP-207ENST00000596014 CETPP11597 493 aa22.89■■□□□ 1.25
PNKP-207ENST00000596014 CCL15Q16663 113 aa22.89■■□□□ 1.25
PNKP-207ENST00000596014 RNF41Q9H4P4 317 aaPredicted RBP22.89■■□□□ 1.25
PNKP-207ENST00000596014 CYP21A2P08686 494 aa22.88■■□□□ 1.25
PNKP-207ENST00000596014 TFAP4Q01664 338 aa22.88■■□□□ 1.25
PNKP-207ENST00000596014 MAP2K1Q02750 393 aaPredicted RBP22.88■■□□□ 1.25
PNKP-207ENST00000596014 FAM47AQ5JRC9 791 aa22.88■■□□□ 1.25
PNKP-207ENST00000596014 BRI3BPQ8WY22 251 aa22.88■■□□□ 1.25
PNKP-207ENST00000596014 TOMM22Q9NS69 142 aa22.88■■□□□ 1.25
PNKP-207ENST00000596014 A0A0G2JLL6 359 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms