RNA–Protein interactions for RNA: ENST00000595690.1

SPTBN4-208, Transcript of spectrin beta, non-erythrocytic 4, human

TSL 2

Gene SPTBN4, Length 763 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTBN4-208	ENST00000595690	CDX2	Q99626	313 aa	Predicted RBP	13.5	□□□□□ -0.25
SPTBN4-208	ENST00000595690	AS3MT	Q9HBK9	375 aa		13.5	□□□□□ -0.25
SPTBN4-208	ENST00000595690	HMG20B	Q9P0W2	317 aa		13.5	□□□□□ -0.25
SPTBN4-208	ENST00000595690	HERC5	Q9UII4	1024 aa	Known RBP	13.5	□□□□□ -0.25
SPTBN4-208	ENST00000595690	LTBP2	Q14767	1821 aa		13.5	□□□□□ -0.25
SPTBN4-208	ENST00000595690	IGHA2	P01877	340 aa		13.49	□□□□□ -0.25
SPTBN4-208	ENST00000595690	RGS2	P41220	211 aa		13.49	□□□□□ -0.25
SPTBN4-208	ENST00000595690	ERICH6	Q7L0X2	663 aa		13.49	□□□□□ -0.25
SPTBN4-208	ENST00000595690	METTL16	Q86W50	562 aa	Known RBP	13.49	□□□□□ -0.25
SPTBN4-208	ENST00000595690	XAGE2	Q96GT9	111 aa		13.49	□□□□□ -0.25
SPTBN4-208	ENST00000595690	APBA2	Q99767	749 aa		13.49	□□□□□ -0.25
SPTBN4-208	ENST00000595690	PRDM6	Q9NQX0	595 aa		13.49	□□□□□ -0.25
SPTBN4-208	ENST00000595690	FLRT1	Q9NZU1	646 aa		13.49	□□□□□ -0.25
SPTBN4-208	ENST00000595690		A0A1B0GUL7	405 aa		13.48	□□□□□ -0.25
SPTBN4-208	ENST00000595690	CNMD	O75829	334 aa		13.48	□□□□□ -0.25
SPTBN4-208	ENST00000595690	UBTFL1	P0CB47	393 aa	Predicted RBP	13.48	□□□□□ -0.25
SPTBN4-208	ENST00000595690	PDE3A	Q14432	1141 aa		13.48	□□□□□ -0.25
SPTBN4-208	ENST00000595690	TBC1D9	Q6ZT07	1266 aa		13.48	□□□□□ -0.25
SPTBN4-208	ENST00000595690	PLEKHH3	Q7Z736	793 aa		13.48	□□□□□ -0.25
SPTBN4-208	ENST00000595690	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.48	□□□□□ -0.25
SPTBN4-208	ENST00000595690	EMILIN3	Q9NT22	766 aa		13.48	□□□□□ -0.25
SPTBN4-208	ENST00000595690	C19orf81	C9J6K1	198 aa		13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	ASNS	P08243	561 aa		13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	MAP2K5	Q13163	448 aa		13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	C9orf50	Q5SZB4	431 aa		13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	ZNF697	Q5TEC3	545 aa		13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	TEX11	Q8IYF3	940 aa		13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	MAFA	Q8NHW3	353 aa	Predicted RBP	13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	TTYH1	Q9H313	450 aa	Predicted RBP	13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	SEMA6B	Q9H3T3	888 aa		13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	TMOD4	Q9NZQ9	345 aa		13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	PI4KB	Q9UBF8	816 aa		13.47	□□□□□ -0.25
SPTBN4-208	ENST00000595690	ATN1	P54259	1190 aa	Predicted RBP	13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	GSTO1	P78417	241 aa		13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	TFCP2	Q12800	502 aa		13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	MVP	Q14764	893 aa	Known RBP	13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	SHH	Q15465	462 aa		13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	SPATA5	Q8NB90	893 aa		13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	TRPV1	Q8NER1	839 aa		13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	DDX20	Q9UHI6	824 aa	Known RBP	13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	ZBTB21	Q9ULJ3	1066 aa		13.46	□□□□□ -0.25
SPTBN4-208	ENST00000595690	CHD9	Q3L8U1	2897 aa		13.46	□□□□□ -0.26
SPTBN4-208	ENST00000595690	USP17L10	C9JJH3	530 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	DNM1L	O00429	736 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	GDF11	O95390	407 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	LDHC	P07864	332 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	HOXC6	P09630	235 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	ARID4A	P29374	1257 aa	Predicted RBP	13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	RTP1	P59025	263 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	LPAR1	Q92633	364 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	PAGR1	Q9BTK6	254 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	DHX36	Q9H2U1	1008 aa	Known RBP	13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	XIRP2	A4UGR9	3374 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	RLF	Q13129	1914 aa		13.45	□□□□□ -0.26
SPTBN4-208	ENST00000595690	BDP1	A6H8Y1	2624 aa		13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	MCAM	P43121	646 aa		13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	ALDH1L2	Q3SY69	923 aa		13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	ADGRA1	Q86SQ6	560 aa		13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	MYLIP	Q8WY64	445 aa		13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	EDC3	Q96F86	508 aa	Known RBP	13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	MEIS3	Q99687	375 aa		13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	GINM1	Q9NU53	330 aa		13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	NDUFB9	Q9Y6M9	179 aa		13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	NCOR1	O75376	2440 aa		13.44	□□□□□ -0.26
SPTBN4-208	ENST00000595690	FLT1	P17948	1338 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	PTPRE	P23469	700 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	PPP4C	P60510	307 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	GRB14	Q14449	540 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	SNX17	Q15036	470 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	MFSD14C	Q5VZR4	134 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	MAPKAPK5	Q8IW41	473 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	C12orf42	Q96LP6	360 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	CDK5RAP2	Q96SN8	1893 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	RAI14	Q9P0K7	980 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	AKAP2	Q9Y2D5	859 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	RABGAP1	Q9Y3P9	1069 aa		13.43	□□□□□ -0.26
SPTBN4-208	ENST00000595690	FOCAD	Q5VW36	1801 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	SLC15A5	A6NIM6	579 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	MSC	O60682	206 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	CYBA	P13498	195 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	CYP2C19	P33261	490 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	SMAD3	P84022	425 aa	Known RBP	13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	MTX1	Q13505	466 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	USP17L2	Q6R6M4	530 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	LBX2	Q6XYB7	198 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	NPLOC4	Q8TAT6	608 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	TGFBRAP1	Q8WUH2	860 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	BTBD7	Q9P203	1132 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	PALD1	Q9ULE6	856 aa		13.42	□□□□□ -0.26
SPTBN4-208	ENST00000595690	CHD7	Q9P2D1	2997 aa		13.41	□□□□□ -0.26
SPTBN4-208	ENST00000595690		E9PSI1	815 aa		13.41	□□□□□ -0.26
SPTBN4-208	ENST00000595690	GJC2	Q5T442	439 aa	Predicted RBP	13.41	□□□□□ -0.26
SPTBN4-208	ENST00000595690	SLC39A5	Q6ZMH5	540 aa		13.41	□□□□□ -0.26
SPTBN4-208	ENST00000595690	CCAR1	Q8IX12	1150 aa	Known RBP	13.41	□□□□□ -0.26
SPTBN4-208	ENST00000595690	FAM9B	Q8IZU0	186 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms