RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 NKD2Q969F2 451 aaPredicted RBP4.09□□□□□ -1.75
VRK3-204ENST00000593912 NUDT12Q9BQG2 462 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 ZNF536O15090 1300 aa4.09□□□□□ -1.75
VRK3-204ENST00000593912 MYBBP1AQ9BQG0 1328 aaKnown RBP4.09□□□□□ -1.75
VRK3-204ENST00000593912 A0A1B0GUL6 1792 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 LOC285556D6RIA3 1793 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 ATP5J2-PTCD1G3V325 749 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 CXCL11O14625 94 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 TIMP1P01033 207 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 PDGFBP01127 241 aaPredicted RBP4.08□□□□□ -1.76
VRK3-204ENST00000593912 XRCC5P13010 732 aaKnown RBP4.08□□□□□ -1.76
VRK3-204ENST00000593912 CYP2C19P33261 490 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 TNNI2P48788 182 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 PPIGQ13427 754 aaKnown RBP eCLIP4.08□□□□□ -1.767e-7■■■■■ 31.9
VRK3-204ENST00000593912 PDIA6Q15084 440 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 HSP90AB3PQ58FF7 597 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 MFSD5Q6N075 450 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 PSRC1Q6PGN9 363 aaPredicted RBP4.08□□□□□ -1.76
VRK3-204ENST00000593912 FASTKD5Q7L8L6 764 aaKnown RBP4.08□□□□□ -1.76
VRK3-204ENST00000593912 RNF135Q8IUD6 432 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 ANKRD18AQ8IVF6 992 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 DZIP1LQ8IYY4 767 aaKnown RBP4.08□□□□□ -1.76
VRK3-204ENST00000593912 USP6NLQ92738 828 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 JARID2Q92833 1246 aaPredicted RBP4.08□□□□□ -1.76
VRK3-204ENST00000593912 ZNF521Q96K83 1311 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 PHACTR3Q96KR7 559 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 ZNF341Q9BYN7 854 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 PPP1R12CQ9BZL4 782 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 IRF2BPLQ9H1B7 796 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 CD209Q9NNX6 404 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 DLL3Q9NYJ7 618 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 MINPP1Q9UNW1 487 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 NDUFB9Q9Y6M9 179 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 ZHX2Q9Y6X8 837 aa4.08□□□□□ -1.76
VRK3-204ENST00000593912 DOCK1Q14185 1865 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 UTYO14607 1347 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 HELZ2Q9BYK8 2649 aaKnown RBP4.07□□□□□ -1.76
VRK3-204ENST00000593912 TRIM75PA6NK02 468 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 GALR2O43603 387 aaPredicted RBP4.07□□□□□ -1.76
VRK3-204ENST00000593912 SLURP2P0DP57 97 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 SLC5A1P13866 664 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 EIF2S2P20042 333 aaKnown RBP4.07□□□□□ -1.76
VRK3-204ENST00000593912 RGS2P41220 211 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 LRRC41Q15345 812 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 PKN1Q16512 942 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 RSPO4Q2I0M5 234 aaPredicted RBP4.07□□□□□ -1.76
VRK3-204ENST00000593912 FAM47AQ5JRC9 791 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 NOL9Q5SY16 702 aaKnown RBP4.07□□□□□ -1.76
VRK3-204ENST00000593912 C1orf53Q5VUE5 145 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 DCAF15Q66K64 600 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 MORC1Q86VD1 984 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 ADHFE1Q8IWW8 467 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 XAGE3Q8WTP9 111 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 SOCS4Q8WXH5 440 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 APBA2Q99767 749 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 UPF3BQ9BZI7 483 aaKnown RBP4.07□□□□□ -1.76
VRK3-204ENST00000593912 PORCNQ9H237 461 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 TXNRD2Q9NNW7 524 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 ZNF112Q9UJU3 913 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 TBX21Q9UL17 535 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 TTF2Q9UNY4 1162 aaKnown RBP4.07□□□□□ -1.76
VRK3-204ENST00000593912 AGTPBP1Q9UPW5 1226 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 SLC45A1Q9Y2W3 748 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 AFG3L2Q9Y4W6 797 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 PCDHA11Q9Y5I1 949 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 WDFY3Q8IZQ1 3526 aa4.07□□□□□ -1.76
VRK3-204ENST00000593912 DSPP15924 2871 aaKnown RBP4.07□□□□□ -1.76
VRK3-204ENST00000593912 USP9XQ93008 2570 aaPredicted RBP4.07□□□□□ -1.76
VRK3-204ENST00000593912 COL4A3Q01955 1670 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 SMCHD1A6NHR9 2005 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 UMODL1Q5DID0 1318 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 PTPRSQ13332 1948 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 A0A1W2PQ45 241 aaPredicted RBP4.06□□□□□ -1.76
VRK3-204ENST00000593912 A0A1W2PQY0 241 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 ZBBXA8MT70 800 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 MSCO60682 206 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 FGBP02675 491 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 ADRB1P08588 477 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 CYBAP13498 195 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 PTPRAP18433 802 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 CYP2C18P33260 490 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 CRKP46108 304 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 EIF4A1P60842 406 aaKnown RBP4.06□□□□□ -1.76
VRK3-204ENST00000593912 ZXDAP98168 799 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 TAP1Q03518 808 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 GRIK5Q16478 980 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 TMEM67Q5HYA8 995 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 MORN1Q5T089 497 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 MFSD14CQ5VZR4 134 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 CCDC174Q6PII3 467 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 EP400NLQ6ZTU2 488 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 GPR142Q7Z601 462 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 TRMT44Q8IYL2 757 aaKnown RBP4.06□□□□□ -1.76
VRK3-204ENST00000593912 CRIPAKQ8N1N5 446 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 ARRDC4Q8NCT1 418 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 ISCA1Q9BUE6 129 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 ASCC2Q9H1I8 757 aaPredicted RBP4.06□□□□□ -1.76
VRK3-204ENST00000593912 IL23AQ9NPF7 189 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 DOCK2Q92608 1830 aa4.06□□□□□ -1.76
VRK3-204ENST00000593912 RALGAPA2Q2PPJ7 1873 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms