RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 METTL16Q86W50 562 aaKnown RBP27.67■■■□□ 2.02
SSBP4-203ENST00000593641 CCDC8Q9H0W5 538 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-203ENST00000593641 PAK6Q9NQU5 681 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-203ENST00000593641 TLR7Q9NYK1 1049 aaKnown RBP27.67■■■□□ 2.02
SSBP4-203ENST00000593641 C19orf81C9J6K1 198 aa27.66■■■□□ 2.02
SSBP4-203ENST00000593641 ZBTB7BO15156 539 aaPredicted RBP27.66■■■□□ 2.02
SSBP4-203ENST00000593641 IDH1O75874 414 aaKnown RBP27.66■■■□□ 2.02
SSBP4-203ENST00000593641 GDF11O95390 407 aa27.66■■■□□ 2.02
SSBP4-203ENST00000593641 CYP7A1P22680 504 aa27.66■■■□□ 2.02
SSBP4-203ENST00000593641 SAP30BPQ9UHR5 308 aaKnown RBP27.66■■■□□ 2.02
SSBP4-203ENST00000593641 HMGCRP04035 888 aa27.65■■■□□ 2.02
SSBP4-203ENST00000593641 RLBP1P12271 317 aa27.65■■■□□ 2.02
SSBP4-203ENST00000593641 CERS3Q8IU89 383 aa27.65■■■□□ 2.02
SSBP4-203ENST00000593641 EAF2Q96CJ1 260 aaPredicted RBP27.65■■■□□ 2.02
SSBP4-203ENST00000593641 ZBTB21Q9ULJ3 1066 aa27.65■■■□□ 2.02
SSBP4-203ENST00000593641 USP17L10C9JJH3 530 aa27.64■■■□□ 2.02
SSBP4-203ENST00000593641 HOXA7P31268 230 aaPredicted RBP27.64■■■□□ 2.02
SSBP4-203ENST00000593641 DYNLL1P63167 89 aaKnown RBP27.64■■■□□ 2.02
SSBP4-203ENST00000593641 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.64■■■□□ 2.023e-6■■■□□ 15.2
SSBP4-203ENST00000593641 MORF4L1Q9UBU8 362 aa27.64■■■□□ 2.02
SSBP4-203ENST00000593641 USP5P45974 858 aa27.63■■■□□ 2.01
SSBP4-203ENST00000593641 PLXNB2O15031 1838 aa27.62■■■□□ 2.01
SSBP4-203ENST00000593641 JAG1P78504 1218 aa27.62■■■□□ 2.01
SSBP4-203ENST00000593641 CEP85Q6P2H3 762 aa27.62■■■□□ 2.01
SSBP4-203ENST00000593641 ERC1Q8IUD2 1116 aa27.62■■■□□ 2.01
SSBP4-203ENST00000593641 MIGA1Q8NAN2 632 aa27.62■■■□□ 2.01
SSBP4-203ENST00000593641 CRISPLD2Q9H0B8 497 aa27.62■■■□□ 2.01
SSBP4-203ENST00000593641 RBM27Q9P2N5 1060 aaKnown RBP27.62■■■□□ 2.01
SSBP4-203ENST00000593641 EVI5O60447 810 aa27.61■■■□□ 2.01
SSBP4-203ENST00000593641 HERVK_113P62684 666 aa27.61■■■□□ 2.01
SSBP4-203ENST00000593641 SHROOM1Q2M3G4 852 aaPredicted RBP27.61■■■□□ 2.01
SSBP4-203ENST00000593641 MAGEB6Q8N7X4 407 aa27.61■■■□□ 2.01
SSBP4-203ENST00000593641 P2RX7Q99572 595 aaKnown RBP27.61■■■□□ 2.01
SSBP4-203ENST00000593641 GJD2Q9UKL4 321 aa27.61■■■□□ 2.01
SSBP4-203ENST00000593641 SZT2Q5T011 3432 aa27.61■■■□□ 2.01
SSBP4-203ENST00000593641 MAP3K12Q12852 859 aa27.6■■■□□ 2.01
SSBP4-203ENST00000593641 GPRC5AQ8NFJ5 357 aa27.6■■■□□ 2.01
SSBP4-203ENST00000593641 TMED8Q6PL24 325 aaPredicted RBP27.59■■■□□ 2.01
SSBP4-203ENST00000593641 AACSQ86V21 672 aa27.59■■■□□ 2.01
SSBP4-203ENST00000593641 GTF3C2Q8WUA4 911 aaPredicted RBP27.59■■■□□ 2.01
SSBP4-203ENST00000593641 SOCS4Q8WXH5 440 aa27.59■■■□□ 2.01
SSBP4-203ENST00000593641 HMX1Q9NP08 348 aaPredicted RBP27.59■■■□□ 2.01
SSBP4-203ENST00000593641 EXOC6BQ9Y2D4 811 aa27.59■■■□□ 2.01
SSBP4-203ENST00000593641 RPTORQ8N122 1335 aa27.59■■■□□ 2.01
SSBP4-203ENST00000593641 ALPK3Q96L96 1907 aa27.59■■■□□ 2.01
SSBP4-203ENST00000593641 GH2P01242 217 aa27.58■■■□□ 2.01
SSBP4-203ENST00000593641 USP17L2Q6R6M4 530 aa27.58■■■□□ 2.01
SSBP4-203ENST00000593641 NECAB2Q7Z6G3 386 aa27.58■■■□□ 2.01
SSBP4-203ENST00000593641 CCAR1Q8IX12 1150 aaKnown RBP27.58■■■□□ 2.01
SSBP4-203ENST00000593641 PAWRQ96IZ0 340 aaKnown RBP27.58■■■□□ 2.01
SSBP4-203ENST00000593641 NUDT12Q9BQG2 462 aa27.58■■■□□ 2.01
SSBP4-203ENST00000593641 SERPINB13Q9UIV8 391 aa27.58■■■□□ 2.01
SSBP4-203ENST00000593641 NDUFB9Q9Y6M9 179 aa27.58■■■□□ 2.01
SSBP4-203ENST00000593641 CYP2B6P20813 491 aa27.57■■■□□ 2
SSBP4-203ENST00000593641 PDE3AQ14432 1141 aa27.57■■■□□ 2
SSBP4-203ENST00000593641 HSP90AB4PQ58FF6 505 aa27.57■■■□□ 2
SSBP4-203ENST00000593641 ANKLE1Q8NAG6 615 aa27.57■■■□□ 2
SSBP4-203ENST00000593641 FEZ1Q99689 392 aa27.57■■■□□ 2
SSBP4-203ENST00000593641 TXNRD2Q9NNW7 524 aa27.57■■■□□ 2
SSBP4-203ENST00000593641 NAV1Q8NEY1 1877 aa27.56■■■□□ 2
SSBP4-203ENST00000593641 MAPK4P31152 587 aa27.56■■■□□ 2
SSBP4-203ENST00000593641 TTC6Q86TZ1 520 aa27.56■■■□□ 2
SSBP4-203ENST00000593641 TRIB2Q92519 343 aa27.56■■■□□ 2
SSBP4-203ENST00000593641 EHD4Q9H223 541 aa27.56■■■□□ 2
SSBP4-203ENST00000593641 ANTXR1Q9H6X2 564 aa27.56■■■□□ 2
SSBP4-203ENST00000593641 ERVK-9P63128 1117 aa27.55■■■□□ 2
SSBP4-203ENST00000593641 ERVK-24P63145 666 aa27.55■■■□□ 2
SSBP4-203ENST00000593641 TATDN1Q6P1N9 297 aa27.55■■■□□ 2
SSBP4-203ENST00000593641 PAGR1Q9BTK6 254 aa27.55■■■□□ 2
SSBP4-203ENST00000593641 EMILIN3Q9NT22 766 aa27.55■■■□□ 2
SSBP4-203ENST00000593641 PEX10O60683 326 aa27.54■■■□□ 2
SSBP4-203ENST00000593641 TRIM32Q13049 653 aa27.54■■■□□ 2
SSBP4-203ENST00000593641 MIER1Q8N108 512 aa27.54■■■□□ 2
SSBP4-203ENST00000593641 PANK1Q8TE04 598 aa27.54■■■□□ 2
SSBP4-203ENST00000593641 DIS3LQ8TF46 1054 aaKnown RBP27.54■■■□□ 2
SSBP4-203ENST00000593641 DDX60LQ5H9U9 1706 aaKnown RBP27.53■■■□□ 2
SSBP4-203ENST00000593641 XRCC5P13010 732 aaKnown RBP27.53■■■□□ 2
SSBP4-203ENST00000593641 RAB3GAP1Q15042 981 aa27.53■■■□□ 2
SSBP4-203ENST00000593641 TTF1Q15361 905 aaPredicted RBP27.53■■■□□ 2
SSBP4-203ENST00000593641 ZYXQ15942 572 aaKnown RBP27.53■■■□□ 2
SSBP4-203ENST00000593641 TRMT44Q8IYL2 757 aaKnown RBP27.53■■■□□ 2
SSBP4-203ENST00000593641 PRO3102Q9H379 93 aa27.53■■■□□ 2
SSBP4-203ENST00000593641 CWC22Q9HCG8 908 aaKnown RBP27.53■■■□□ 2
SSBP4-203ENST00000593641 IL1RAPL2Q9NP60 686 aa27.53■■■□□ 2
SSBP4-203ENST00000593641 RBPJLQ9UBG7 517 aa27.53■■■□□ 2
SSBP4-203ENST00000593641 ZBED9Q6R2W3 1325 aa27.52■■■□□ 2
SSBP4-203ENST00000593641 PRKAR2AP13861 404 aaKnown RBP27.52■■■□□ 2
SSBP4-203ENST00000593641 USP14P54578 494 aa27.52■■■□□ 2
SSBP4-203ENST00000593641 CERKLQ49MI3 558 aaPredicted RBP27.52■■■□□ 2
SSBP4-203ENST00000593641 C12orf42Q96LP6 360 aa27.52■■■□□ 2
SSBP4-203ENST00000593641 MS4A1P11836 297 aa27.51■■□□□ 1.99
SSBP4-203ENST00000593641 ZKSCAN1P17029 563 aaPredicted RBP27.51■■□□□ 1.99
SSBP4-203ENST00000593641 ABCB5Q2M3G0 1257 aa27.51■■□□□ 1.99
SSBP4-203ENST00000593641 Q3C1V9 767 aa27.51■■□□□ 1.99
SSBP4-203ENST00000593641 GPR142Q7Z601 462 aa27.51■■□□□ 1.99
SSBP4-203ENST00000593641 RHPN1Q8TCX5 695 aa27.51■■□□□ 1.99
SSBP4-203ENST00000593641 NBPF3Q9H094 633 aa27.51■■□□□ 1.99
SSBP4-203ENST00000593641 CABP5Q9NP86 173 aa27.51■■□□□ 1.99
SSBP4-203ENST00000593641 USP17L15C9J2P7 530 aa27.5■■□□□ 1.99
SSBP4-203ENST00000593641 USP17L13C9JLJ4 530 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms