RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MORF4L1Q9UBU8 362 aa20.04■□□□□ 0.8
LIG1-205ENST00000593425 NR2E3Q9Y5X4 410 aa20.04■□□□□ 0.8
LIG1-205ENST00000593425 CEP290O15078 2479 aa20.04■□□□□ 0.8
LIG1-205ENST00000593425 DDX60LQ5H9U9 1706 aaKnown RBP20.03■□□□□ 0.8
LIG1-205ENST00000593425 HMGCRP04035 888 aa20.03■□□□□ 0.8
LIG1-205ENST00000593425 CRACR2BQ8N4Y2 399 aaPredicted RBP20.03■□□□□ 0.8
LIG1-205ENST00000593425 DIS3LQ8TF46 1054 aaKnown RBP20.03■□□□□ 0.8
LIG1-205ENST00000593425 CCDC8Q9H0W5 538 aaPredicted RBP20.03■□□□□ 0.8
LIG1-205ENST00000593425 SAP30BPQ9UHR5 308 aaKnown RBP20.03■□□□□ 0.8
LIG1-205ENST00000593425 NOP58Q9Y2X3 529 aaKnown RBP20.03■□□□□ 0.8
LIG1-205ENST00000593425 TRIOBPQ9H2D6 2365 aa20.03■□□□□ 0.8
LIG1-205ENST00000593425 RLBP1P12271 317 aa20.02■□□□□ 0.8
LIG1-205ENST00000593425 IRX3P78415 501 aaPredicted RBP20.02■□□□□ 0.8
LIG1-205ENST00000593425 FOXP4Q8IVH2 680 aaPredicted RBP20.02■□□□□ 0.8
LIG1-205ENST00000593425 PAWRQ96IZ0 340 aaKnown RBP20.02■□□□□ 0.8
LIG1-205ENST00000593425 P2RX7Q99572 595 aaKnown RBP20.02■□□□□ 0.8
LIG1-205ENST00000593425 TXNRD2Q9NNW7 524 aa20.02■□□□□ 0.8
LIG1-205ENST00000593425 TMOD4Q9NZQ9 345 aa20.02■□□□□ 0.8
LIG1-205ENST00000593425 ZBTB21Q9ULJ3 1066 aa20.02■□□□□ 0.8
LIG1-205ENST00000593425 EVI5O60447 810 aa20.01■□□□□ 0.79
LIG1-205ENST00000593425 CYP7A1P22680 504 aa20.01■□□□□ 0.79
LIG1-205ENST00000593425 HOXA7P31268 230 aaPredicted RBP20.01■□□□□ 0.79
LIG1-205ENST00000593425 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
LIG1-205ENST00000593425 TRIB2Q92519 343 aa20.01■□□□□ 0.79
LIG1-205ENST00000593425 EAF2Q96CJ1 260 aaPredicted RBP20.01■□□□□ 0.79
LIG1-205ENST00000593425 TRIM34Q9BYJ4 488 aa20.01■□□□□ 0.79
LIG1-205ENST00000593425 NDUFB9Q9Y6M9 179 aa20.01■□□□□ 0.79
LIG1-205ENST00000593425 USP17L10C9JJH3 530 aa20■□□□□ 0.79
LIG1-205ENST00000593425 CAPN2P17655 700 aa20■□□□□ 0.79
LIG1-205ENST00000593425 HERVK_113P62684 666 aa20■□□□□ 0.79
LIG1-205ENST00000593425 FTSJ3Q8IY81 847 aaKnown RBP20■□□□□ 0.79
LIG1-205ENST00000593425 MIGA1Q8NAN2 632 aa20■□□□□ 0.79
LIG1-205ENST00000593425 C19orf81C9J6K1 198 aa19.99■□□□□ 0.79
LIG1-205ENST00000593425 IGSF3O75054 1194 aa19.99■□□□□ 0.79
LIG1-205ENST00000593425 HLA-DOAP06340 250 aa19.99■□□□□ 0.79
LIG1-205ENST00000593425 CYP2B6P20813 491 aa19.99■□□□□ 0.79
LIG1-205ENST00000593425 GINM1Q9NU53 330 aa19.99■□□□□ 0.79
LIG1-205ENST00000593425 RPTORQ8N122 1335 aa19.99■□□□□ 0.79
LIG1-205ENST00000593425 IDH1O75874 414 aaKnown RBP19.98■□□□□ 0.79
LIG1-205ENST00000593425 POTEEQ6S8J3 1075 aa19.98■□□□□ 0.79
LIG1-205ENST00000593425 NECAB2Q7Z6G3 386 aa19.98■□□□□ 0.79
LIG1-205ENST00000593425 ANTXR1Q9H6X2 564 aa19.98■□□□□ 0.79
LIG1-205ENST00000593425 HMX1Q9NP08 348 aaPredicted RBP19.98■□□□□ 0.79
LIG1-205ENST00000593425 EMILIN3Q9NT22 766 aa19.98■□□□□ 0.79
LIG1-205ENST00000593425 RBPJLQ9UBG7 517 aa19.98■□□□□ 0.79
LIG1-205ENST00000593425 NAV1Q8NEY1 1877 aa19.98■□□□□ 0.79
LIG1-205ENST00000593425 MNX1P50219 401 aaPredicted RBP19.97■□□□□ 0.79
LIG1-205ENST00000593425 Q3C1V9 767 aa19.97■□□□□ 0.79
LIG1-205ENST00000593425 MAGEB6Q8N7X4 407 aa19.97■□□□□ 0.79
LIG1-205ENST00000593425 ANKLE1Q8NAG6 615 aa19.97■□□□□ 0.79
LIG1-205ENST00000593425 GPRC5AQ8NFJ5 357 aa19.97■□□□□ 0.79
LIG1-205ENST00000593425 PORCNQ9H237 461 aa19.97■□□□□ 0.79
LIG1-205ENST00000593425 SZT2Q5T011 3432 aa19.97■□□□□ 0.79
LIG1-205ENST00000593425 GH2P01242 217 aa19.96■□□□□ 0.79
LIG1-205ENST00000593425 ERVK-9P63128 1117 aa19.96■□□□□ 0.79
LIG1-205ENST00000593425 ERVK-24P63145 666 aa19.96■□□□□ 0.79
LIG1-205ENST00000593425 HNRNPUQ00839 825 aaKnown RBP eCLIP19.96■□□□□ 0.79
LIG1-205ENST00000593425 MAP3K21Q5TCX8 1036 aa19.96■□□□□ 0.79
LIG1-205ENST00000593425 CEP85Q6P2H3 762 aa19.96■□□□□ 0.79
LIG1-205ENST00000593425 NUDT12Q9BQG2 462 aa19.96■□□□□ 0.79
LIG1-205ENST00000593425 PAGR1Q9BTK6 254 aa19.96■□□□□ 0.79
LIG1-205ENST00000593425 FRMPD3Q5JV73 1810 aa19.95■□□□□ 0.78
LIG1-205ENST00000593425 PRKAR2AP13861 404 aaKnown RBP19.95■□□□□ 0.78
LIG1-205ENST00000593425 USP5P45974 858 aa19.95■□□□□ 0.78
LIG1-205ENST00000593425 ZYXQ15942 572 aaKnown RBP19.95■□□□□ 0.78
LIG1-205ENST00000593425 TATDN1Q6P1N9 297 aa19.95■□□□□ 0.78
LIG1-205ENST00000593425 USP17L2Q6R6M4 530 aa19.95■□□□□ 0.78
LIG1-205ENST00000593425 SOCS4Q8WXH5 440 aa19.95■□□□□ 0.78
LIG1-205ENST00000593425 STAP2Q9UGK3 403 aa19.95■□□□□ 0.78
LIG1-205ENST00000593425 EXOC6BQ9Y2D4 811 aa19.95■□□□□ 0.78
LIG1-205ENST00000593425 RANBP2P49792 3224 aaKnown RBP19.94■□□□□ 0.78
LIG1-205ENST00000593425 GPR142Q7Z601 462 aa19.94■□□□□ 0.78
LIG1-205ENST00000593425 C7orf61Q8IZ16 206 aa19.94■□□□□ 0.78
LIG1-205ENST00000593425 USP6NLQ92738 828 aa19.94■□□□□ 0.78
LIG1-205ENST00000593425 C12orf42Q96LP6 360 aa19.94■□□□□ 0.78
LIG1-205ENST00000593425 OGDHLQ9ULD0 1010 aa19.94■□□□□ 0.78
LIG1-205ENST00000593425 A0A1W2PPC1 479 aa19.93■□□□□ 0.78
LIG1-205ENST00000593425 SOX1O00570 391 aaPredicted RBP19.93■□□□□ 0.78
LIG1-205ENST00000593425 XRCC5P13010 732 aaKnown RBP19.93■□□□□ 0.78
LIG1-205ENST00000593425 MAPK4P31152 587 aa19.93■□□□□ 0.78
LIG1-205ENST00000593425 AACSQ86V21 672 aa19.93■□□□□ 0.78
LIG1-205ENST00000593425 NBPF3Q9H094 633 aa19.93■□□□□ 0.78
LIG1-205ENST00000593425 EHD4Q9H223 541 aa19.93■□□□□ 0.78
LIG1-205ENST00000593425 SERPINB13Q9UIV8 391 aa19.93■□□□□ 0.78
LIG1-205ENST00000593425 ZMYND8Q9ULU4 1186 aaPredicted RBP19.93■□□□□ 0.78
LIG1-205ENST00000593425 CNMDO75829 334 aa19.92■□□□□ 0.78
LIG1-205ENST00000593425 ZKSCAN1P17029 563 aaPredicted RBP19.92■□□□□ 0.78
LIG1-205ENST00000593425 CACNB2Q08289 660 aaPredicted RBP19.92■□□□□ 0.78
LIG1-205ENST00000593425 PDE3AQ14432 1141 aa19.92■□□□□ 0.78
LIG1-205ENST00000593425 CCL14Q16627 93 aa19.92■□□□□ 0.78
LIG1-205ENST00000593425 MORN1Q5T089 497 aa19.92■□□□□ 0.78
LIG1-205ENST00000593425 CERS3Q8IU89 383 aa19.92■□□□□ 0.78
LIG1-205ENST00000593425 GTF3C2Q8WUA4 911 aaPredicted RBP19.92■□□□□ 0.78
LIG1-205ENST00000593425 FEZ1Q99689 392 aa19.92■□□□□ 0.78
LIG1-205ENST00000593425 RIOK1Q9BRS2 568 aaKnown RBP19.92■□□□□ 0.78
LIG1-205ENST00000593425 C11orf49Q9H6J7 331 aa19.92■□□□□ 0.78
LIG1-205ENST00000593425 PLCD1P51178 756 aa19.91■□□□□ 0.78
LIG1-205ENST00000593425 MAP3K12Q12852 859 aa19.91■□□□□ 0.78
LIG1-205ENST00000593425 RAB3GAP1Q15042 981 aa19.91■□□□□ 0.78
LIG1-205ENST00000593425 PLEKHH3Q7Z736 793 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms