RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SH2B1Q9NRF2 756 aaPredicted RBP15.88■□□□□ 0.13
VMP1-217ENST00000593168 USP40Q9NVE5 1235 aa15.88■□□□□ 0.13
VMP1-217ENST00000593168 MCM9Q9NXL9 1143 aa15.88■□□□□ 0.13
VMP1-217ENST00000593168 HDAC9Q9UKV0 1011 aa15.88■□□□□ 0.13
VMP1-217ENST00000593168 BAZ2AQ9UIF9 1905 aaKnown RBP15.88■□□□□ 0.13
VMP1-217ENST00000593168 HSP90AA1P07900 732 aaKnown RBP15.87■□□□□ 0.13
VMP1-217ENST00000593168 NBPF9Q3BBW0 867 aa15.87■□□□□ 0.13
VMP1-217ENST00000593168 CDC42EP5Q6NZY7 148 aa15.87■□□□□ 0.13
VMP1-217ENST00000593168 INTS4Q96HW7 963 aaKnown RBP15.87■□□□□ 0.13
VMP1-217ENST00000593168 TCEANC2Q96MN5 208 aa15.87■□□□□ 0.13
VMP1-217ENST00000593168 MTA3Q9BTC8 594 aa15.87■□□□□ 0.13
VMP1-217ENST00000593168 B4E1Z4 1266 aa15.86■□□□□ 0.13
VMP1-217ENST00000593168 PRC1O43663 620 aa15.86■□□□□ 0.13
VMP1-217ENST00000593168 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
VMP1-217ENST00000593168 WDHD1O75717 1129 aaPredicted RBP15.86■□□□□ 0.13
VMP1-217ENST00000593168 FGD1P98174 961 aa15.86■□□□□ 0.13
VMP1-217ENST00000593168 NOL8Q76FK4 1167 aaKnown RBP15.86■□□□□ 0.13
VMP1-217ENST00000593168 MAPKAPK5Q8IW41 473 aa15.86■□□□□ 0.13
VMP1-217ENST00000593168 TACC3Q9Y6A5 838 aa15.86■□□□□ 0.13
VMP1-217ENST00000593168 FLT1P17948 1338 aa15.86■□□□□ 0.13
VMP1-217ENST00000593168 NEDD4P46934 1319 aa15.86■□□□□ 0.13
VMP1-217ENST00000593168 CDK5RAP2Q96SN8 1893 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 CYP2D7A0A087X1C5 515 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 ORC4O43929 436 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 POLR3DP05423 398 aaPredicted RBP15.85■□□□□ 0.13
VMP1-217ENST00000593168 TM4SF4P48230 202 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 RBM5P52756 815 aaKnown RBP eCLIP15.85■□□□□ 0.13
VMP1-217ENST00000593168 EVCP57679 992 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 ANTXR2P58335 489 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 PKN2Q16513 984 aaKnown RBP15.85■□□□□ 0.13
VMP1-217ENST00000593168 CFAP100Q494V2 611 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 OGFOD1Q8N543 542 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 TMEM87BQ96K49 555 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 CWC22Q9HCG8 908 aaKnown RBP15.85■□□□□ 0.13
VMP1-217ENST00000593168 INCENPQ9NQS7 918 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 ZSWIM5Q9P217 1185 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 TPCN1Q9ULQ1 816 aa15.85■□□□□ 0.13
VMP1-217ENST00000593168 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
VMP1-217ENST00000593168 GPR25O00155 361 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 CYP2D6P10635 497 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 PDE4BQ07343 736 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 MKRN3Q13064 507 aaKnown RBP15.84■□□□□ 0.13
VMP1-217ENST00000593168 ME3Q16798 604 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 CYB5R4Q7L1T6 521 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 CHST3Q7LGC8 479 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 MTMR14Q8NCE2 650 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 SPRYD3Q8NCJ5 442 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 ESR2Q92731 530 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 BRF1Q92994 677 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 IDI2Q9BXS1 227 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 LRRC2Q9BYS8 371 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 FOCADQ5VW36 1801 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 ROBO3Q96MS0 1386 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 NAV1Q8NEY1 1877 aa15.84■□□□□ 0.13
VMP1-217ENST00000593168 LAMB1P07942 1786 aa15.83■□□□□ 0.12
VMP1-217ENST00000593168 SMIM22K7EJ46 135 aa15.83■□□□□ 0.12
VMP1-217ENST00000593168 KDM4AO75164 1064 aa15.83■□□□□ 0.12
VMP1-217ENST00000593168 DDIT3P35638 169 aa15.83■□□□□ 0.12
VMP1-217ENST00000593168 TTLL12Q14166 644 aaPredicted RBP15.83■□□□□ 0.12
VMP1-217ENST00000593168 TTC6Q86TZ1 520 aa15.83■□□□□ 0.12
VMP1-217ENST00000593168 ZNF274Q96GC6 653 aaPredicted RBP15.83■□□□□ 0.12
VMP1-217ENST00000593168 PRMT6Q96LA8 375 aaPredicted RBP15.83■□□□□ 0.12
VMP1-217ENST00000593168 LARP6Q9BRS8 491 aaKnown RBP15.83■□□□□ 0.12
VMP1-217ENST00000593168 SLKQ9H2G2 1235 aaPredicted RBP15.83■□□□□ 0.12
VMP1-217ENST00000593168 R3HDMLQ9H3Y0 253 aa15.83■□□□□ 0.12
VMP1-217ENST00000593168 TOMM22Q9NS69 142 aa15.83■□□□□ 0.12
VMP1-217ENST00000593168 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 WNT10BO00744 389 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 LARGE1O95461 756 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 LIFRP42702 1097 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 DLGAP5Q15398 846 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 RRP12Q5JTH9 1297 aaKnown RBP15.82■□□□□ 0.12
VMP1-217ENST00000593168 NKX2-3Q8TAU0 364 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 IGDCC4Q8TDY8 1250 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 CHMP4CQ96CF2 233 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 OSBPL5Q9H0X9 879 aaPredicted RBP15.82■□□□□ 0.12
VMP1-217ENST00000593168 ZNF287Q9HBT7 754 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 SAP30BPQ9UHR5 308 aaKnown RBP15.82■□□□□ 0.12
VMP1-217ENST00000593168 TAOK2Q9UL54 1235 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
VMP1-217ENST00000593168 ANGEL1Q9UNK9 670 aaKnown RBP15.82■□□□□ 0.12
VMP1-217ENST00000593168 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.82■□□□□ 0.12
VMP1-217ENST00000593168 PCDHAC2Q9Y5I4 1007 aa15.82■□□□□ 0.12
VMP1-217ENST00000593168 SH2B2O14492 632 aaPredicted RBP15.81■□□□□ 0.12
VMP1-217ENST00000593168 MYH1P12882 1939 aa15.81■□□□□ 0.12
VMP1-217ENST00000593168 PLCD1P51178 756 aa15.81■□□□□ 0.12
VMP1-217ENST00000593168 EVX2Q03828 476 aa15.81■□□□□ 0.12
VMP1-217ENST00000593168 SART3Q15020 963 aaKnown RBP15.81■□□□□ 0.12
VMP1-217ENST00000593168 NOM1Q5C9Z4 860 aaKnown RBP15.81■□□□□ 0.12
VMP1-217ENST00000593168 DDX60LQ5H9U9 1706 aaKnown RBP15.81■□□□□ 0.12
VMP1-217ENST00000593168 ECM29Q5VYK3 1845 aa15.81■□□□□ 0.12
VMP1-217ENST00000593168 FBXO46Q6PJ61 603 aaPredicted RBP15.81■□□□□ 0.12
VMP1-217ENST00000593168 STK11IPQ8N1F8 1099 aa15.81■□□□□ 0.12
VMP1-217ENST00000593168 DDX4Q9NQI0 724 aaKnown RBP15.81■□□□□ 0.12
VMP1-217ENST00000593168 CHMP5Q9NZZ3 219 aa15.81■□□□□ 0.12
VMP1-217ENST00000593168 IFIT3O14879 490 aaKnown RBP15.8■□□□□ 0.12
VMP1-217ENST00000593168 RANBP6O60518 1105 aaKnown RBP15.8■□□□□ 0.12
VMP1-217ENST00000593168 PFKFB2O60825 505 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 ENTPD3O75355 529 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms