RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 FPGT-TNNI3KV9GXZ4 949 aa13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 RANBP2P49792 3224 aaKnown RBP13.77□□□□□ -0.2
PRKCSH-220ENST00000593104 PFASO15067 1338 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 UQCRFS1P1P0C7P4 283 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 CCND3P30281 292 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 HERVK_113P62684 666 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 ATF7IPQ6VMQ6 1270 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 RPTORQ8N122 1335 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 MIGA1Q8NAN2 632 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 GDF15Q99988 308 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 EMILIN3Q9NT22 766 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 PI4KBQ9UBF8 816 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 RBPJLQ9UBG7 517 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 MORF4L1Q9UBU8 362 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 ZBTB21Q9ULJ3 1066 aa13.77□□□□□ -0.21
PRKCSH-220ENST00000593104 MYH1P12882 1939 aa13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 MAGEA10P43363 369 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 EVX2Q03828 476 aa13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 PABPC4Q13310 644 aaKnown RBP eCLIP13.76□□□□□ -0.212e-10■■■□□ 15.1
PRKCSH-220ENST00000593104 OS9Q13438 667 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 CRACR2BQ8N4Y2 399 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 SLC17A8Q8NDX2 589 aa13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 NOL10Q9BSC4 688 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 WDR18Q9BV38 432 aa13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 CCDC8Q9H0W5 538 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
PRKCSH-220ENST00000593104 CACNB2Q08289 660 aaPredicted RBP13.75□□□□□ -0.21
PRKCSH-220ENST00000593104 POLA2Q14181 598 aa13.75□□□□□ -0.21
PRKCSH-220ENST00000593104 NBPF3Q9H094 633 aa13.75□□□□□ -0.21
PRKCSH-220ENST00000593104 ANTXR1Q9H6X2 564 aa13.75□□□□□ -0.21
PRKCSH-220ENST00000593104 DBNLQ9UJU6 430 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-220ENST00000593104 OGDHLQ9ULD0 1010 aa13.75□□□□□ -0.21
PRKCSH-220ENST00000593104 FRMPD3Q5JV73 1810 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 USP17L10C9JJH3 530 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 SURF6O75683 361 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 CNMDO75829 334 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 BAG3O95817 575 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 GH2P01242 217 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 ASNSP08243 561 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 CYP7A1P22680 504 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 HOXA7P31268 230 aaPredicted RBP13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 PPP4CP60510 307 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 ERVK-9P63128 1117 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 ERVK-24P63145 666 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 MAP3K21Q5TCX8 1036 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 GPR142Q7Z601 462 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 GPRC5AQ8NFJ5 357 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 NUDT12Q9BQG2 462 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 TRIM34Q9BYJ4 488 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 FLRT1Q9NZU1 646 aa13.74□□□□□ -0.21
PRKCSH-220ENST00000593104 DLL1O00548 723 aa13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 IDH1O75874 414 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 ZKSCAN1P17029 563 aaPredicted RBP13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 LRRC26Q2I0M4 334 aa13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 CCDC158Q5M9N0 1113 aa13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 ANKLE1Q8NAG6 615 aa13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 ACER1Q8TDN7 264 aa13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 DHX36Q9H2U1 1008 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-220ENST00000593104 A0A1W2PPC1 479 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 RLBP1P12271 317 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 ATP8B2P98198 1209 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 MDM2Q00987 491 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 MORN1Q5T089 497 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 WDR78Q5VTH9 848 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 LHX8Q68G74 356 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 METTL16Q86W50 562 aaKnown RBP13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 FOXP4Q8IVH2 680 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 MAGEB6Q8N7X4 407 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 SSH3Q8TE77 659 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 USP6NLQ92738 828 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 EAF2Q96CJ1 260 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 FEZ1Q99689 392 aa13.72□□□□□ -0.21
PRKCSH-220ENST00000593104 LAMA3Q16787 3333 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 C19orf81C9J6K1 198 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 IPO8O15397 1037 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 HLA-DOAP06340 250 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 PLCG2P16885 1265 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 PDE3AQ14432 1141 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 USP17L2Q6R6M4 530 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 PLEKHH3Q7Z736 793 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 DEFB123Q8N688 67 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 SOCS4Q8WXH5 440 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 UBE2OQ9C0C9 1292 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 GPR108Q9NPR9 543 aa13.71□□□□□ -0.21
PRKCSH-220ENST00000593104 MAPK4P31152 587 aa13.7□□□□□ -0.22
PRKCSH-220ENST00000593104 BMP8BP34820 402 aa13.7□□□□□ -0.22
PRKCSH-220ENST00000593104 RGS2P41220 211 aa13.7□□□□□ -0.22
PRKCSH-220ENST00000593104 USP5P45974 858 aa13.7□□□□□ -0.22
PRKCSH-220ENST00000593104 PLCD1P51178 756 aa13.7□□□□□ -0.22
PRKCSH-220ENST00000593104 CCAR1Q8IX12 1150 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms