RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SDR42E1Q8WUS8 393 aa16.79■□□□□ 0.28
APOC1-208ENST00000592535 ARMC5Q96C12 935 aa16.79■□□□□ 0.28
APOC1-208ENST00000592535 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
APOC1-208ENST00000592535 WDR18Q9BV38 432 aa16.79■□□□□ 0.28
APOC1-208ENST00000592535 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.79■□□□□ 0.28
APOC1-208ENST00000592535 ARMT1Q9H993 441 aa16.79■□□□□ 0.28
APOC1-208ENST00000592535 GINM1Q9NU53 330 aa16.79■□□□□ 0.28
APOC1-208ENST00000592535 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
APOC1-208ENST00000592535 MBD4O95243 580 aa16.78■□□□□ 0.28
APOC1-208ENST00000592535 GNRH1P01148 92 aa16.78■□□□□ 0.28
APOC1-208ENST00000592535 PLCD1P51178 756 aa16.78■□□□□ 0.28
APOC1-208ENST00000592535 EVX2Q03828 476 aa16.78■□□□□ 0.28
APOC1-208ENST00000592535 MTMR2Q13614 643 aa16.78■□□□□ 0.28
APOC1-208ENST00000592535 TSHZ3Q63HK5 1081 aa16.78■□□□□ 0.28
APOC1-208ENST00000592535 TATDN1Q6P1N9 297 aa16.78■□□□□ 0.28
APOC1-208ENST00000592535 SMCR8Q8TEV9 937 aaPredicted RBP16.78■□□□□ 0.28
APOC1-208ENST00000592535 MCM9Q9NXL9 1143 aa16.78■□□□□ 0.28
APOC1-208ENST00000592535 HTTP42858 3142 aa16.77■□□□□ 0.28
APOC1-208ENST00000592535 FMNL1O95466 1100 aaPredicted RBP16.77■□□□□ 0.28
APOC1-208ENST00000592535 GH2P01242 217 aa16.77■□□□□ 0.28
APOC1-208ENST00000592535 POLR3DP05423 398 aaPredicted RBP16.77■□□□□ 0.28
APOC1-208ENST00000592535 OSBPP22059 807 aa16.77■□□□□ 0.28
APOC1-208ENST00000592535 BACE1P56817 501 aa16.77■□□□□ 0.28
APOC1-208ENST00000592535 DCP1AQ9NPI6 582 aaPredicted RBP16.77■□□□□ 0.28
APOC1-208ENST00000592535 PRKAB2O43741 272 aa16.76■□□□□ 0.27
APOC1-208ENST00000592535 SHMT1P34896 483 aa16.76■□□□□ 0.27
APOC1-208ENST00000592535 PRMT2P55345 433 aa16.76■□□□□ 0.27
APOC1-208ENST00000592535 UBE3CQ15386 1083 aa16.76■□□□□ 0.27
APOC1-208ENST00000592535 SLC9C1Q4G0N8 1177 aa16.76■□□□□ 0.27
APOC1-208ENST00000592535 GPATCH3Q96I76 525 aa16.76■□□□□ 0.27
APOC1-208ENST00000592535 SRRDQ9UH36 339 aa16.76■□□□□ 0.27
APOC1-208ENST00000592535 PNMA3Q9UL41 463 aa16.76■□□□□ 0.27
APOC1-208ENST00000592535 DOCK3Q8IZD9 2030 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 CYP2D6P10635 497 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 FCGRTP55899 365 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 GABPAQ06546 454 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.273e-8■■■■■ 39.9
APOC1-208ENST00000592535 CERKLQ49MI3 558 aaPredicted RBP16.75■□□□□ 0.27
APOC1-208ENST00000592535 ZSCAN25Q6NSZ9 544 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 SH3TC2Q8TF17 1288 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 ZNF333Q96JL9 665 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 ASCC2Q9H1I8 757 aaPredicted RBP16.75■□□□□ 0.27
APOC1-208ENST00000592535 TMOD4Q9NZQ9 345 aa16.75■□□□□ 0.27
APOC1-208ENST00000592535 KIAA0100Q14667 2235 aaKnown RBP16.75■□□□□ 0.27
APOC1-208ENST00000592535 MYPNQ86TC9 1320 aa16.74■□□□□ 0.27
APOC1-208ENST00000592535 C19orf81C9J6K1 198 aa16.74■□□□□ 0.27
APOC1-208ENST00000592535 HOXD10P28358 340 aa16.74■□□□□ 0.27
APOC1-208ENST00000592535 ABCB5Q2M3G0 1257 aa16.74■□□□□ 0.27
APOC1-208ENST00000592535 ANKRD13CQ8N6S4 541 aa16.74■□□□□ 0.27
APOC1-208ENST00000592535 OTUD7AQ8TE49 926 aaPredicted RBP16.74■□□□□ 0.27
APOC1-208ENST00000592535 PUS7LQ9H0K6 701 aaKnown RBP16.74■□□□□ 0.27
APOC1-208ENST00000592535 PRKCZQ05513 592 aa16.73■□□□□ 0.27
APOC1-208ENST00000592535 RAB3GAP1Q15042 981 aa16.73■□□□□ 0.27
APOC1-208ENST00000592535 NBPF11Q86T75 865 aa16.73■□□□□ 0.27
APOC1-208ENST00000592535 KBTBD3Q8NAB2 608 aa16.73■□□□□ 0.27
APOC1-208ENST00000592535 EMILIN3Q9NT22 766 aa16.73■□□□□ 0.27
APOC1-208ENST00000592535 ATP8A2Q9NTI2 1148 aa16.73■□□□□ 0.27
APOC1-208ENST00000592535 MYCP01106 439 aaPredicted RBP16.72■□□□□ 0.27
APOC1-208ENST00000592535 HOXA7P31268 230 aaPredicted RBP16.72■□□□□ 0.27
APOC1-208ENST00000592535 GUCY1A2P33402 732 aa16.72■□□□□ 0.27
APOC1-208ENST00000592535 GCLCP48506 637 aaPredicted RBP16.72■□□□□ 0.27
APOC1-208ENST00000592535 FAM110CQ1W6H9 321 aa16.72■□□□□ 0.27
APOC1-208ENST00000592535 USP17L2Q6R6M4 530 aa16.72■□□□□ 0.27
APOC1-208ENST00000592535 SLC44A5Q8NCS7 719 aa16.72■□□□□ 0.27
APOC1-208ENST00000592535 RAET1EQ8TD07 263 aa16.72■□□□□ 0.27
APOC1-208ENST00000592535 DYNLL2Q96FJ2 89 aa16.72■□□□□ 0.27
APOC1-208ENST00000592535 CABP5Q9NP86 173 aa16.72■□□□□ 0.27
APOC1-208ENST00000592535 GABRQQ9UN88 632 aa16.72■□□□□ 0.27
APOC1-208ENST00000592535 TTC41PQ6P2S7 1318 aa16.71■□□□□ 0.27
APOC1-208ENST00000592535 CYP2D7A0A087X1C5 515 aa16.71■□□□□ 0.27
APOC1-208ENST00000592535 SMIM22K7EJ46 135 aa16.71■□□□□ 0.27
APOC1-208ENST00000592535 IRX3P78415 501 aaPredicted RBP16.71■□□□□ 0.27
APOC1-208ENST00000592535 ZYXQ15942 572 aaKnown RBP16.71■□□□□ 0.27
APOC1-208ENST00000592535 PI4K2BQ8TCG2 481 aa16.71■□□□□ 0.27
APOC1-208ENST00000592535 ACER1Q8TDN7 264 aa16.71■□□□□ 0.27
APOC1-208ENST00000592535 P2RX7Q99572 595 aaKnown RBP16.71■□□□□ 0.27
APOC1-208ENST00000592535 FEZ1Q99689 392 aa16.71■□□□□ 0.27
APOC1-208ENST00000592535 SLC4A4Q9Y6R1 1079 aa16.71■□□□□ 0.27
APOC1-208ENST00000592535 MPHOSPH10O00566 681 aaKnown RBP16.7■□□□□ 0.26
APOC1-208ENST00000592535 TNPO2O14787 897 aaKnown RBP16.7■□□□□ 0.26
APOC1-208ENST00000592535 GRK4P32298 578 aa16.7■□□□□ 0.26
APOC1-208ENST00000592535 SEPT2Q15019 361 aa16.7■□□□□ 0.26
APOC1-208ENST00000592535 C12orf60Q5U649 245 aa16.7■□□□□ 0.26
APOC1-208ENST00000592535 C12orf42Q96LP6 360 aa16.7■□□□□ 0.26
APOC1-208ENST00000592535 TMEM106CQ9BVX2 250 aa16.7■□□□□ 0.26
APOC1-208ENST00000592535 PLXNB2O15031 1838 aa16.69■□□□□ 0.26
APOC1-208ENST00000592535 USP17L12C9JPN9 530 aa16.69■□□□□ 0.26
APOC1-208ENST00000592535 USP17L21D6R901 530 aa16.69■□□□□ 0.26
APOC1-208ENST00000592535 ERC2O15083 957 aa16.69■□□□□ 0.26
APOC1-208ENST00000592535 RNF113AO15541 343 aaKnown RBP16.69■□□□□ 0.26
APOC1-208ENST00000592535 PEX10O60683 326 aa16.69■□□□□ 0.26
APOC1-208ENST00000592535 EN2P19622 333 aaPredicted RBP16.69■□□□□ 0.26
APOC1-208ENST00000592535 MX1P20591 662 aa16.69■□□□□ 0.26
APOC1-208ENST00000592535 FLT3LGP49771 235 aa16.69■□□□□ 0.26
APOC1-208ENST00000592535 HERVK_113P62684 666 aa16.69■□□□□ 0.26
APOC1-208ENST00000592535 HDAC1Q13547 482 aaPredicted RBP16.69■□□□□ 0.26
APOC1-208ENST00000592535 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
APOC1-208ENST00000592535 APPBP2Q92624 585 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms