RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 LMOD3Q0VAK6 560 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 PTPN14Q15678 1187 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 EML3Q32P44 896 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 TTC22Q5TAA0 569 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 TMCO3Q6UWJ1 677 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 LEKR1Q6ZMV7 388 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 PRR23CQ6ZRP0 262 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 BRINP3Q76B58 766 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 C14orf37Q86TY3 774 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 SLC51AQ86UW1 340 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 SUGP1Q8IWZ8 645 aaKnown RBP6.92□□□□□ -1.3
NPC1-213ENST00000591955 TNS4Q8IZW8 715 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 ZNF280CQ8ND82 737 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 MEGF10Q96KG7 1140 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 QTRT2Q9H974 415 aaKnown RBP6.92□□□□□ -1.3
NPC1-213ENST00000591955 IFT57Q9NWB7 429 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.92□□□□□ -1.3
NPC1-213ENST00000591955 NAGPAQ9UK23 515 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
NPC1-213ENST00000591955 TMEM131LA2VDJ0 1609 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 CCDC196A0A1B0GTZ2 297 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 DHX16O60231 1041 aaKnown RBP6.91□□□□□ -1.3
NPC1-213ENST00000591955 HMMRO75330 724 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 RPS6KA5O75582 802 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 CAPN2P17655 700 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 SOX11P35716 441 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 MAGEA9P43362 315 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 SEMA3FQ13275 785 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 IDI1Q13907 227 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 NEUROD2Q15784 382 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 TPD52L1Q16890 204 aaPredicted RBP6.91□□□□□ -1.3
NPC1-213ENST00000591955 WASHC4Q2M389 1173 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 ANKRD45Q5TZF3 282 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 SARM1Q6SZW1 724 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 MORC1Q86VD1 984 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 FBXO11Q86XK2 927 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 RPAP2Q8IXW5 612 aaPredicted RBP6.91□□□□□ -1.3
NPC1-213ENST00000591955 SECISBP2LQ93073 1101 aaKnown RBP6.91□□□□□ -1.3
NPC1-213ENST00000591955 SUSD3Q96L08 255 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 CEP89Q96ST8 783 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 ACBD3Q9H3P7 528 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 IGFLR1Q9H665 355 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 MED4Q9NPJ6 270 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 DDX19AQ9NUU7 478 aaKnown RBP6.91□□□□□ -1.3
NPC1-213ENST00000591955 DNAJB12Q9NXW2 375 aaKnown RBP6.91□□□□□ -1.3
NPC1-213ENST00000591955 CEP83Q9Y592 693 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 MST1RQ04912 1400 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 ADAMTS13Q76LX8 1427 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 PTPRUQ92729 1446 aa6.91□□□□□ -1.3
NPC1-213ENST00000591955 NRXN3Q9Y4C0 1643 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 GOLGA6L9A6NEM1 432 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 LZTS3O60299 673 aaPredicted RBP6.9□□□□□ -1.3
NPC1-213ENST00000591955 EIF3JO75822 258 aaKnown RBP6.9□□□□□ -1.3
NPC1-213ENST00000591955 RGS9O75916 674 aaPredicted RBP6.9□□□□□ -1.3
NPC1-213ENST00000591955 CCDC172P0C7W6 258 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 H2AFXP16104 143 aaPredicted RBP6.9□□□□□ -1.3
NPC1-213ENST00000591955 PDCP20941 246 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 NOP2P46087 812 aaKnown RBP6.9□□□□□ -1.3
NPC1-213ENST00000591955 CD97P48960 835 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 HNRNPH2P55795 449 aaKnown RBP6.9□□□□□ -1.3
NPC1-213ENST00000591955 PSMA6P60900 246 aaKnown RBP6.9□□□□□ -1.3
NPC1-213ENST00000591955 PSME1Q06323 249 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 MAP3K11Q16584 847 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 TTC31Q49AM3 519 aaPredicted RBP6.9□□□□□ -1.3
NPC1-213ENST00000591955 HSP90AB3PQ58FF7 597 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 MSL1Q68DK7 614 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 HOMEZQ8IX15 550 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 FBXO18Q8NFZ0 1043 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 DDX11Q96FC9 970 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 MRFAP1L1Q96HT8 127 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 TMX3Q96JJ7 454 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 FUCA2Q9BTY2 467 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 L2HGDHQ9H9P8 463 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 IMPACTQ9P2X3 320 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 RSPH14Q9UHP6 348 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 AOX1Q06278 1338 aa6.9□□□□□ -1.3
NPC1-213ENST00000591955 PLEKHG1Q9ULL1 1385 aa6.9□□□□□ -1.31
NPC1-213ENST00000591955 ADGRL3Q9HAR2 1447 aa6.9□□□□□ -1.31
NPC1-213ENST00000591955 RIMS2Q9UQ26 1411 aa6.9□□□□□ -1.31
NPC1-213ENST00000591955 MARF1Q9Y4F3 1742 aaKnown RBP6.9□□□□□ -1.31
NPC1-213ENST00000591955 MYO1CO00159 1063 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 CTAGE5O15320 804 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 SETQ01105 290 aaPredicted RBP6.89□□□□□ -1.31
NPC1-213ENST00000591955 SATB1Q01826 763 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 TUBB2AQ13885 445 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 GRIK5Q16478 980 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 ZSCAN26Q16670 478 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 EFCAB13Q8IY85 973 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 TMEM57Q8N5G2 664 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 CCDC150Q8NCX0 1101 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 TDRD7Q8NHU6 1098 aaKnown RBP6.89□□□□□ -1.31
NPC1-213ENST00000591955 TUBB2BQ9BVA1 445 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 PHACTR1Q9C0D0 580 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 SRCIN1Q9C0H9 1055 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 DONSONQ9NYP3 566 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 RAI14Q9P0K7 980 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 ZDHHC9Q9Y397 364 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 HCN4Q9Y3Q4 1203 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 JRKLQ9Y4A0 524 aa6.89□□□□□ -1.31
NPC1-213ENST00000591955 RPAP1Q9BWH6 1393 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms