RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 TMOD4Q9NZQ9 345 aa20.9■□□□□ 0.94
POLR2E-208ENST00000591709 SPTBN5Q9NRC6 3674 aaKnown RBP20.89■□□□□ 0.94
POLR2E-208ENST00000591709 CDH23Q9H251 3354 aa20.89■□□□□ 0.93
POLR2E-208ENST00000591709 UBTFL1P0CB47 393 aaPredicted RBP20.89■□□□□ 0.93
POLR2E-208ENST00000591709 MAPK4P31152 587 aa20.89■□□□□ 0.93
POLR2E-208ENST00000591709 RGS2P41220 211 aa20.89■□□□□ 0.93
POLR2E-208ENST00000591709 GPR142Q7Z601 462 aa20.89■□□□□ 0.93
POLR2E-208ENST00000591709 CCAR1Q8IX12 1150 aaKnown RBP20.89■□□□□ 0.93
POLR2E-208ENST00000591709 PAGR1Q9BTK6 254 aa20.89■□□□□ 0.93
POLR2E-208ENST00000591709 SENP6Q9GZR1 1112 aaPredicted RBP20.89■□□□□ 0.93
POLR2E-208ENST00000591709 HOXA7P31268 230 aaPredicted RBP20.88■□□□□ 0.93
POLR2E-208ENST00000591709 RARSP54136 660 aaKnown RBP20.88■□□□□ 0.93
POLR2E-208ENST00000591709 BACE1P56817 501 aa20.88■□□□□ 0.93
POLR2E-208ENST00000591709 TIMM10P62072 90 aa20.88■□□□□ 0.93
POLR2E-208ENST00000591709 ERVK-9P63128 1117 aa20.88■□□□□ 0.93
POLR2E-208ENST00000591709 ERVK-24P63145 666 aa20.88■□□□□ 0.93
POLR2E-208ENST00000591709 USP6NLQ92738 828 aa20.88■□□□□ 0.93
POLR2E-208ENST00000591709 NOB1Q9ULX3 412 aaKnown RBP20.88■□□□□ 0.93
POLR2E-208ENST00000591709 ATN1P54259 1190 aaPredicted RBP20.87■□□□□ 0.93
POLR2E-208ENST00000591709 SHROOM1Q2M3G4 852 aaPredicted RBP20.87■□□□□ 0.93
POLR2E-208ENST00000591709 Q3C1V9 767 aa20.87■□□□□ 0.93
POLR2E-208ENST00000591709 PI16Q6UXB8 463 aa20.87■□□□□ 0.93
POLR2E-208ENST00000591709 MAFAQ8NHW3 353 aaPredicted RBP20.87■□□□□ 0.93
POLR2E-208ENST00000591709 CDX2Q99626 313 aaPredicted RBP20.87■□□□□ 0.93
POLR2E-208ENST00000591709 WDR18Q9BV38 432 aa20.87■□□□□ 0.93
POLR2E-208ENST00000591709 RBPJLQ9UBG7 517 aa20.87■□□□□ 0.93
POLR2E-208ENST00000591709 HERC5Q9UII4 1024 aaKnown RBP20.87■□□□□ 0.93
POLR2E-208ENST00000591709 A0A1B0GUL7 405 aa20.86■□□□□ 0.93
POLR2E-208ENST00000591709 MORN1Q5T089 497 aa20.86■□□□□ 0.93
POLR2E-208ENST00000591709 PLEKHH3Q7Z736 793 aa20.86■□□□□ 0.93
POLR2E-208ENST00000591709 TEX11Q8IYF3 940 aa20.86■□□□□ 0.93
POLR2E-208ENST00000591709 NSUN4Q96CB9 384 aaKnown RBP20.86■□□□□ 0.93
POLR2E-208ENST00000591709 XAGE2Q96GT9 111 aa20.86■□□□□ 0.93
POLR2E-208ENST00000591709 CWC22Q9HCG8 908 aaKnown RBP20.86■□□□□ 0.93
POLR2E-208ENST00000591709 TTC28Q96AY4 2481 aa20.85■□□□□ 0.93
POLR2E-208ENST00000591709 ASNSP08243 561 aa20.85■□□□□ 0.93
POLR2E-208ENST00000591709 GSTO1P78417 241 aa20.85■□□□□ 0.93
POLR2E-208ENST00000591709 JAG1P78504 1218 aa20.85■□□□□ 0.93
POLR2E-208ENST00000591709 TBC1D9Q6ZT07 1266 aa20.85■□□□□ 0.93
POLR2E-208ENST00000591709 PRDM6Q9NQX0 595 aa20.85■□□□□ 0.93
POLR2E-208ENST00000591709 PRKAG2Q9UGJ0 569 aa20.85■□□□□ 0.93
POLR2E-208ENST00000591709 GDF11O95390 407 aa20.84■□□□□ 0.93
POLR2E-208ENST00000591709 LDHCP07864 332 aa20.84■□□□□ 0.93
POLR2E-208ENST00000591709 MVPQ14764 893 aaKnown RBP20.84■□□□□ 0.93
POLR2E-208ENST00000591709 DNAJC18Q9H819 358 aa20.84■□□□□ 0.93
POLR2E-208ENST00000591709 COPRSQ9NQ92 184 aa20.84■□□□□ 0.93
POLR2E-208ENST00000591709 RAI14Q9P0K7 980 aa20.84■□□□□ 0.93
POLR2E-208ENST00000591709 HMG20BQ9P0W2 317 aa20.84■□□□□ 0.93
POLR2E-208ENST00000591709 NDUFB9Q9Y6M9 179 aa20.84■□□□□ 0.93
POLR2E-208ENST00000591709 ZNFX1Q9P2E3 1918 aaKnown RBP20.84■□□□□ 0.93
POLR2E-208ENST00000591709 ZNF236Q9UL36 1845 aa20.83■□□□□ 0.93
POLR2E-208ENST00000591709 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
POLR2E-208ENST00000591709 USP17L10C9JJH3 530 aa20.83■□□□□ 0.93
POLR2E-208ENST00000591709 MAP4K4O95819 1239 aaPredicted RBP20.83■□□□□ 0.93
POLR2E-208ENST00000591709 RTP1P59025 263 aa20.83■□□□□ 0.93
POLR2E-208ENST00000591709 MAP2K5Q13163 448 aa20.83■□□□□ 0.93
POLR2E-208ENST00000591709 POTEEQ6S8J3 1075 aa20.83■□□□□ 0.93
POLR2E-208ENST00000591709 SH3RF3Q8TEJ3 882 aaPredicted RBP20.83■□□□□ 0.93
POLR2E-208ENST00000591709 MYLIPQ8WY64 445 aa20.83■□□□□ 0.93
POLR2E-208ENST00000591709 FLRT1Q9NZU1 646 aa20.83■□□□□ 0.93
POLR2E-208ENST00000591709 PI4KBQ9UBF8 816 aa20.83■□□□□ 0.93
POLR2E-208ENST00000591709 MYO9BQ13459 2157 aa20.82■□□□□ 0.92
POLR2E-208ENST00000591709 SMCHD1A6NHR9 2005 aa20.82■□□□□ 0.92
POLR2E-208ENST00000591709 C19orf81C9J6K1 198 aa20.82■□□□□ 0.92
POLR2E-208ENST00000591709 TFCP2Q12800 502 aa20.82■□□□□ 0.92
POLR2E-208ENST00000591709 SHHQ15465 462 aa20.82■□□□□ 0.92
POLR2E-208ENST00000591709 C9orf50Q5SZB4 431 aa20.82■□□□□ 0.92
POLR2E-208ENST00000591709 GTF3C2Q8WUA4 911 aaPredicted RBP20.82■□□□□ 0.92
POLR2E-208ENST00000591709 API5Q9BZZ5 524 aaKnown RBP20.82■□□□□ 0.92
POLR2E-208ENST00000591709 DDX20Q9UHI6 824 aaKnown RBP20.82■□□□□ 0.92
POLR2E-208ENST00000591709 CNGA1P29973 690 aa20.81■□□□□ 0.92
POLR2E-208ENST00000591709 WDR78Q5VTH9 848 aa20.81■□□□□ 0.92
POLR2E-208ENST00000591709 MFSD14CQ5VZR4 134 aa20.81■□□□□ 0.92
POLR2E-208ENST00000591709 SPATA5Q8NB90 893 aa20.81■□□□□ 0.92
POLR2E-208ENST00000591709 SEMA6BQ9H3T3 888 aa20.81■□□□□ 0.92
POLR2E-208ENST00000591709 ZBTB21Q9ULJ3 1066 aa20.81■□□□□ 0.92
POLR2E-208ENST00000591709 ATP11BQ9Y2G3 1177 aa20.81■□□□□ 0.92
POLR2E-208ENST00000591709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.81■□□□□ 0.92
POLR2E-208ENST00000591709 MYH8P13535 1937 aa20.8■□□□□ 0.92
POLR2E-208ENST00000591709 BCAR3O75815 825 aa20.8■□□□□ 0.92
POLR2E-208ENST00000591709 CRACR2BQ8N4Y2 399 aaPredicted RBP20.8■□□□□ 0.92
POLR2E-208ENST00000591709 LPAR1Q92633 364 aa20.8■□□□□ 0.92
POLR2E-208ENST00000591709 EDC3Q96F86 508 aaKnown RBP20.8■□□□□ 0.92
POLR2E-208ENST00000591709 NEUROD6Q96NK8 337 aa20.8■□□□□ 0.92
POLR2E-208ENST00000591709 NOL10Q9BSC4 688 aaKnown RBP20.8■□□□□ 0.92
POLR2E-208ENST00000591709 TRIM34Q9BYJ4 488 aa20.8■□□□□ 0.92
POLR2E-208ENST00000591709 DHX36Q9H2U1 1008 aaKnown RBP20.8■□□□□ 0.92
POLR2E-208ENST00000591709 PRDM5Q9NQX1 630 aaPredicted RBP20.8■□□□□ 0.92
POLR2E-208ENST00000591709 AATFQ9NY61 560 aaKnown RBP eCLIP20.8■□□□□ 0.92
POLR2E-208ENST00000591709 AKAP2Q9Y2D5 859 aa20.8■□□□□ 0.92
POLR2E-208ENST00000591709 DNM1LO00429 736 aa20.79■□□□□ 0.92
POLR2E-208ENST00000591709 MAPKAPK5Q8IW41 473 aa20.79■□□□□ 0.92
POLR2E-208ENST00000591709 TTYH1Q9H313 450 aaPredicted RBP20.79■□□□□ 0.92
POLR2E-208ENST00000591709 EMILIN3Q9NT22 766 aa20.79■□□□□ 0.92
POLR2E-208ENST00000591709 PLXNA1Q9UIW2 1896 aa20.79■□□□□ 0.92
POLR2E-208ENST00000591709 FLT1P17948 1338 aa20.78■□□□□ 0.92
POLR2E-208ENST00000591709 A0A0G2JMZ2 1700 aa20.78■□□□□ 0.92
POLR2E-208ENST00000591709 MSCO60682 206 aa20.78■□□□□ 0.92
POLR2E-208ENST00000591709 CNMDO75829 334 aa20.78■□□□□ 0.92
POLR2E-208ENST00000591709 FOSL2P15408 326 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms