RNA–Protein interactions for RNA: ENST00000591600.1

APOC4-201, Transcript of apolipoprotein C4, humanhuman

TSL 3 BASIC

Gene APOC4, Length 348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-201ENST00000591600 CEP85Q6P2H3 762 aa18.75■□□□□ 0.59
APOC4-201ENST00000591600 CRACR2BQ8N4Y2 399 aaPredicted RBP18.75■□□□□ 0.59
APOC4-201ENST00000591600 CRISPLD2Q9H0B8 497 aa18.75■□□□□ 0.59
APOC4-201ENST00000591600 CCDC8Q9H0W5 538 aaPredicted RBP18.75■□□□□ 0.59
APOC4-201ENST00000591600 TLR7Q9NYK1 1049 aaKnown RBP18.75■□□□□ 0.59
APOC4-201ENST00000591600 GJD2Q9UKL4 321 aa18.75■□□□□ 0.59
APOC4-201ENST00000591600 USP17L10C9JJH3 530 aa18.74■□□□□ 0.59
APOC4-201ENST00000591600 HLA-DOAP06340 250 aa18.74■□□□□ 0.59
APOC4-201ENST00000591600 CYP7A1P22680 504 aa18.74■□□□□ 0.59
APOC4-201ENST00000591600 ERC1Q8IUD2 1116 aa18.74■□□□□ 0.59
APOC4-201ENST00000591600 TRIM34Q9BYJ4 488 aa18.74■□□□□ 0.59
APOC4-201ENST00000591600 TMOD4Q9NZQ9 345 aa18.74■□□□□ 0.59
APOC4-201ENST00000591600 ZBTB21Q9ULJ3 1066 aa18.74■□□□□ 0.59
APOC4-201ENST00000591600 ALPK3Q96L96 1907 aa18.73■□□□□ 0.59
APOC4-201ENST00000591600 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
APOC4-201ENST00000591600 DYNLL1P63167 89 aaKnown RBP18.73■□□□□ 0.59
APOC4-201ENST00000591600 IRX3P78415 501 aaPredicted RBP18.73■□□□□ 0.59
APOC4-201ENST00000591600 TATDN1Q6P1N9 297 aa18.73■□□□□ 0.59
APOC4-201ENST00000591600 DEFB118Q96PH6 123 aa18.73■□□□□ 0.59
APOC4-201ENST00000591600 NR2E3Q9Y5X4 410 aa18.73■□□□□ 0.59
APOC4-201ENST00000591600 TFRCP02786 760 aaKnown RBP18.72■□□□□ 0.59
APOC4-201ENST00000591600 HMGCRP04035 888 aa18.72■□□□□ 0.59
APOC4-201ENST00000591600 MIER1Q8N108 512 aa18.72■□□□□ 0.59
APOC4-201ENST00000591600 P2RX7Q99572 595 aaKnown RBP18.72■□□□□ 0.59
APOC4-201ENST00000591600 EHD4Q9H223 541 aa18.72■□□□□ 0.59
APOC4-201ENST00000591600 DDX60LQ5H9U9 1706 aaKnown RBP18.71■□□□□ 0.59
APOC4-201ENST00000591600 TRIOBPQ9H2D6 2365 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 HERVK_113P62684 666 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 MAP3K12Q12852 859 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 HSP90AB4PQ58FF6 505 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 MAGEB6Q8N7X4 407 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 ANKLE1Q8NAG6 615 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 GPRC5AQ8NFJ5 357 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 SAP30BPQ9UHR5 308 aaKnown RBP18.71■□□□□ 0.59
APOC4-201ENST00000591600 TAOK2Q9UL54 1235 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 ZBED9Q6R2W3 1325 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 RPTORQ8N122 1335 aa18.71■□□□□ 0.59
APOC4-201ENST00000591600 GDF11O95390 407 aa18.7■□□□□ 0.58
APOC4-201ENST00000591600 XRCC5P13010 732 aaKnown RBP18.7■□□□□ 0.58
APOC4-201ENST00000591600 CHRDL2Q6WN34 429 aa18.7■□□□□ 0.58
APOC4-201ENST00000591600 GTF3C2Q8WUA4 911 aaPredicted RBP18.7■□□□□ 0.58
APOC4-201ENST00000591600 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.7■□□□□ 0.58
APOC4-201ENST00000591600 PRO3102Q9H379 93 aa18.7■□□□□ 0.58
APOC4-201ENST00000591600 ANTXR1Q9H6X2 564 aa18.7■□□□□ 0.58
APOC4-201ENST00000591600 SERPINB13Q9UIV8 391 aa18.7■□□□□ 0.58
APOC4-201ENST00000591600 EXOC6BQ9Y2D4 811 aa18.7■□□□□ 0.58
APOC4-201ENST00000591600 MS4A1P11836 297 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 USP5P45974 858 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 SHROOM1Q2M3G4 852 aaPredicted RBP18.69■□□□□ 0.58
APOC4-201ENST00000591600 USP17L2Q6R6M4 530 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 TTC6Q86TZ1 520 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 AACSQ86V21 672 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 MIGA1Q8NAN2 632 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 C12orf42Q96LP6 360 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 TXNRD2Q9NNW7 524 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 HMX1Q9NP08 348 aaPredicted RBP18.69■□□□□ 0.58
APOC4-201ENST00000591600 EMILIN3Q9NT22 766 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 RBPJLQ9UBG7 517 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 NAV1Q8NEY1 1877 aa18.69■□□□□ 0.58
APOC4-201ENST00000591600 MAPK4P31152 587 aa18.68■□□□□ 0.58
APOC4-201ENST00000591600 TTF1Q15361 905 aaPredicted RBP18.68■□□□□ 0.58
APOC4-201ENST00000591600 RHPN1Q8TCX5 695 aa18.68■□□□□ 0.58
APOC4-201ENST00000591600 SOCS4Q8WXH5 440 aa18.68■□□□□ 0.58
APOC4-201ENST00000591600 NUDT12Q9BQG2 462 aa18.68■□□□□ 0.58
APOC4-201ENST00000591600 RIOK1Q9BRS2 568 aaKnown RBP18.68■□□□□ 0.58
APOC4-201ENST00000591600 RBM27Q9P2N5 1060 aaKnown RBP18.68■□□□□ 0.58
APOC4-201ENST00000591600 RANBP2P49792 3224 aaKnown RBP18.68■□□□□ 0.58
APOC4-201ENST00000591600 MYH8P13535 1937 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 EVI5O60447 810 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 GH2P01242 217 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 ERVK-9P63128 1117 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 ERVK-24P63145 666 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 MAP3K21Q5TCX8 1036 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 NECAB2Q7Z6G3 386 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 RPAP2Q8IXW5 612 aaPredicted RBP18.67■□□□□ 0.58
APOC4-201ENST00000591600 TRMT44Q8IYL2 757 aaKnown RBP18.67■□□□□ 0.58
APOC4-201ENST00000591600 PANK1Q8TE04 598 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.67■□□□□ 0.58
APOC4-201ENST00000591600 TRIB2Q92519 343 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 PAWRQ96IZ0 340 aaKnown RBP18.67■□□□□ 0.58
APOC4-201ENST00000591600 NDUFB9Q9Y6M9 179 aa18.67■□□□□ 0.58
APOC4-201ENST00000591600 Q3C1V9 767 aa18.66■□□□□ 0.58
APOC4-201ENST00000591600 POTEEQ6S8J3 1075 aa18.66■□□□□ 0.58
APOC4-201ENST00000591600 USP6NLQ92738 828 aa18.66■□□□□ 0.58
APOC4-201ENST00000591600 KIAA1683Q9H0B3 1180 aa18.66■□□□□ 0.58
APOC4-201ENST00000591600 SZT2Q5T011 3432 aa18.65■□□□□ 0.58
APOC4-201ENST00000591600 A0A1W2PPC1 479 aa18.65■□□□□ 0.58
APOC4-201ENST00000591600 USP14P54578 494 aa18.65■□□□□ 0.58
APOC4-201ENST00000591600 TRIM32Q13049 653 aa18.65■□□□□ 0.58
APOC4-201ENST00000591600 CERKLQ49MI3 558 aaPredicted RBP18.65■□□□□ 0.58
APOC4-201ENST00000591600 DIEXFQ68CQ4 756 aaKnown RBP18.65■□□□□ 0.58
APOC4-201ENST00000591600 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
APOC4-201ENST00000591600 KIF1BPQ96EK5 621 aa18.65■□□□□ 0.58
APOC4-201ENST00000591600 USP17L15C9J2P7 530 aa18.64■□□□□ 0.57
APOC4-201ENST00000591600 USP17L13C9JLJ4 530 aa18.64■□□□□ 0.57
APOC4-201ENST00000591600 USP17L11C9JVI0 530 aa18.64■□□□□ 0.57
APOC4-201ENST00000591600 USP17L18D6R9N7 530 aa18.64■□□□□ 0.57
APOC4-201ENST00000591600 USP17L22D6RA61 530 aa18.64■□□□□ 0.57
APOC4-201ENST00000591600 USP17L17D6RBQ6 530 aa18.64■□□□□ 0.57
APOC4-201ENST00000591600 USP17L19D6RCP7 530 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms