RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 LRIT3Q3SXY7 679 aa19.59■□□□□ 0.73
DDX39A-216ENST00000591275 GPR153Q6NV75 609 aa19.59■□□□□ 0.73
DDX39A-216ENST00000591275 MAPKAPK5Q8IW41 473 aa19.59■□□□□ 0.73
DDX39A-216ENST00000591275 GPRC5AQ8NFJ5 357 aa19.59■□□□□ 0.73
DDX39A-216ENST00000591275 SNRKQ9NRH2 765 aa19.59■□□□□ 0.73
DDX39A-216ENST00000591275 ZKSCAN1P17029 563 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-216ENST00000591275 HOXA7P31268 230 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-216ENST00000591275 CACNB2Q08289 660 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-216ENST00000591275 PDE3AQ14432 1141 aa19.58■□□□□ 0.72
DDX39A-216ENST00000591275 TGFBRAP1Q8WUH2 860 aa19.58■□□□□ 0.72
DDX39A-216ENST00000591275 SOCS4Q8WXH5 440 aa19.58■□□□□ 0.72
DDX39A-216ENST00000591275 PAGR1Q9BTK6 254 aa19.58■□□□□ 0.72
DDX39A-216ENST00000591275 DHX36Q9H2U1 1008 aaKnown RBP19.58■□□□□ 0.72
DDX39A-216ENST00000591275 DNAJC18Q9H819 358 aa19.58■□□□□ 0.72
DDX39A-216ENST00000591275 RBPJLQ9UBG7 517 aa19.58■□□□□ 0.72
DDX39A-216ENST00000591275 CT47B1P0C2W7 299 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-216ENST00000591275 XRCC5P13010 732 aaKnown RBP19.57■□□□□ 0.72
DDX39A-216ENST00000591275 CCND3P30281 292 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-216ENST00000591275 CCL14Q16627 93 aa19.57■□□□□ 0.72
DDX39A-216ENST00000591275 Q3C1V9 767 aa19.57■□□□□ 0.72
DDX39A-216ENST00000591275 NAA16Q6N069 864 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-216ENST00000591275 CCAR1Q8IX12 1150 aaKnown RBP19.57■□□□□ 0.72
DDX39A-216ENST00000591275 CRACR2BQ8N4Y2 399 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-216ENST00000591275 TRIM34Q9BYJ4 488 aa19.57■□□□□ 0.72
DDX39A-216ENST00000591275 PORCNQ9H237 461 aa19.57■□□□□ 0.72
DDX39A-216ENST00000591275 CDK5RAP2Q96SN8 1893 aa19.56■□□□□ 0.72
DDX39A-216ENST00000591275 FLT1P17948 1338 aa19.56■□□□□ 0.72
DDX39A-216ENST00000591275 USP17L10C9JJH3 530 aa19.56■□□□□ 0.72
DDX39A-216ENST00000591275 BAG3O95817 575 aa19.56■□□□□ 0.72
DDX39A-216ENST00000591275 UQCRFS1P1P0C7P4 283 aa19.56■□□□□ 0.72
DDX39A-216ENST00000591275 MAPK4P31152 587 aa19.56■□□□□ 0.72
DDX39A-216ENST00000591275 MTMR10Q9NXD2 777 aa19.56■□□□□ 0.72
DDX39A-216ENST00000591275 PALD1Q9ULE6 856 aa19.56■□□□□ 0.72
DDX39A-216ENST00000591275 STXBP5LQ9Y2K9 1186 aa19.56■□□□□ 0.72
DDX39A-216ENST00000591275 C19orf81C9J6K1 198 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 COL6A1P12109 1028 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 RARSP54136 660 aaKnown RBP19.55■□□□□ 0.72
DDX39A-216ENST00000591275 ERVK-9P63128 1117 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 ERVK-24P63145 666 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 MDM2Q00987 491 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-216ENST00000591275 G3BP1Q13283 466 aaKnown RBP eCLIP19.55■□□□□ 0.72
DDX39A-216ENST00000591275 LRRC26Q2I0M4 334 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 LHX8Q68G74 356 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 POTEEQ6S8J3 1075 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 GPR142Q7Z601 462 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 ADGRA1Q86SQ6 560 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 USP6NLQ92738 828 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 SAP30BPQ9UHR5 308 aaKnown RBP19.55■□□□□ 0.72
DDX39A-216ENST00000591275 ZBTB21Q9ULJ3 1066 aa19.55■□□□□ 0.72
DDX39A-216ENST00000591275 PNMA6EA0A0J9YXQ4 647 aa19.54■□□□□ 0.72
DDX39A-216ENST00000591275 PLCG2P16885 1265 aa19.54■□□□□ 0.72
DDX39A-216ENST00000591275 RGS2P41220 211 aa19.54■□□□□ 0.72
DDX39A-216ENST00000591275 PLEKHH3Q7Z736 793 aa19.54■□□□□ 0.72
DDX39A-216ENST00000591275 FOXP4Q8IVH2 680 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-216ENST00000591275 TRMT44Q8IYL2 757 aaKnown RBP19.54■□□□□ 0.72
DDX39A-216ENST00000591275 TNNQ9UQP3 1299 aa19.54■□□□□ 0.72
DDX39A-216ENST00000591275 MAST2Q6P0Q8 1798 aa19.54■□□□□ 0.72
DDX39A-216ENST00000591275 FOCADQ5VW36 1801 aa19.53■□□□□ 0.72
DDX39A-216ENST00000591275 PPP4CP60510 307 aa19.53■□□□□ 0.72
DDX39A-216ENST00000591275 TTC39AQ5SRH9 613 aa19.53■□□□□ 0.72
DDX39A-216ENST00000591275 MORN1Q5T089 497 aa19.53■□□□□ 0.72
DDX39A-216ENST00000591275 METTL16Q86W50 562 aaKnown RBP19.53■□□□□ 0.72
DDX39A-216ENST00000591275 APBA2Q99767 749 aa19.53■□□□□ 0.72
DDX39A-216ENST00000591275 CWC22Q9HCG8 908 aaKnown RBP19.53■□□□□ 0.72
DDX39A-216ENST00000591275 EMILIN3Q9NT22 766 aa19.53■□□□□ 0.72
DDX39A-216ENST00000591275 NDUFB9Q9Y6M9 179 aa19.53■□□□□ 0.72
DDX39A-216ENST00000591275 MYO5AQ9Y4I1 1855 aaKnown RBP19.53■□□□□ 0.72
DDX39A-216ENST00000591275 GNAI2P04899 355 aa19.52■□□□□ 0.72
DDX39A-216ENST00000591275 ZYXQ15942 572 aaKnown RBP19.52■□□□□ 0.72
DDX39A-216ENST00000591275 ARHGAP45Q92619 1136 aa19.52■□□□□ 0.72
DDX39A-216ENST00000591275 DBNDD2Q9BQY9 259 aa19.52■□□□□ 0.72
DDX39A-216ENST00000591275 CYP2E1P05181 493 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-216ENST00000591275 DYNLL1P63167 89 aaKnown RBP19.51■□□□□ 0.71
DDX39A-216ENST00000591275 WDR78Q5VTH9 848 aa19.51■□□□□ 0.71
DDX39A-216ENST00000591275 USP17L2Q6R6M4 530 aa19.51■□□□□ 0.71
DDX39A-216ENST00000591275 GINM1Q9NU53 330 aa19.51■□□□□ 0.71
DDX39A-216ENST00000591275 GH2P01242 217 aa19.5■□□□□ 0.71
DDX39A-216ENST00000591275 HLA-DOAP06340 250 aa19.5■□□□□ 0.71
DDX39A-216ENST00000591275 GTF3C2Q8WUA4 911 aaPredicted RBP19.5■□□□□ 0.71
DDX39A-216ENST00000591275 FRMPD3Q5JV73 1810 aa19.5■□□□□ 0.71
DDX39A-216ENST00000591275 CNMDO75829 334 aa19.49■□□□□ 0.71
DDX39A-216ENST00000591275 MAP2K5Q13163 448 aa19.49■□□□□ 0.71
DDX39A-216ENST00000591275 TNNI3KQ59H18 835 aa19.49■□□□□ 0.71
DDX39A-216ENST00000591275 CCDC158Q5M9N0 1113 aa19.49■□□□□ 0.71
DDX39A-216ENST00000591275 CLUAP1Q96AJ1 413 aa19.49■□□□□ 0.71
DDX39A-216ENST00000591275 EDC3Q96F86 508 aaKnown RBP19.49■□□□□ 0.71
DDX39A-216ENST00000591275 FEZ1Q99689 392 aa19.49■□□□□ 0.71
DDX39A-216ENST00000591275 SENP6Q9GZR1 1112 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-216ENST00000591275 PIH1D3Q9NQM4 214 aaKnown RBP19.49■□□□□ 0.71
DDX39A-216ENST00000591275 FLRT1Q9NZU1 646 aa19.49■□□□□ 0.71
DDX39A-216ENST00000591275 RABGAP1Q9Y3P9 1069 aa19.49■□□□□ 0.71
DDX39A-216ENST00000591275 FPGT-TNNI3KV9GXZ4 949 aa19.49■□□□□ 0.71
DDX39A-216ENST00000591275 TRIM27P14373 513 aa19.48■□□□□ 0.71
DDX39A-216ENST00000591275 ZAP70P43403 619 aa19.48■□□□□ 0.71
DDX39A-216ENST00000591275 OS9Q13438 667 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-216ENST00000591275 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-216ENST00000591275 MYH1P12882 1939 aa19.48■□□□□ 0.71
DDX39A-216ENST00000591275 USP17L15C9J2P7 530 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 USP17L13C9JLJ4 530 aa19.47■□□□□ 0.71
DDX39A-216ENST00000591275 USP17L11C9JVI0 530 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms