RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 INCENPQ9NQS7 918 aa15.17■□□□□ 0.02
PTBP1-216ENST00000590887 COL2A1P02458 1487 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-216ENST00000590887 DICER1Q9UPY3 1922 aaKnown RBP15.16■□□□□ 0.02
PTBP1-216ENST00000590887 H3BQV1 296 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 STX6O43752 255 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 PRDM1O75626 825 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 GNAQP50148 359 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 PLCD1P51178 756 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 IFFO2Q5TF58 517 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 TRIM22Q8IYM9 498 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 NEDD1Q8NHV4 660 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 ANKS1AQ92625 1134 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 PRMT6Q96LA8 375 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-216ENST00000590887 MAP3K14Q99558 947 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 TDRD3Q9H7E2 651 aaKnown RBP15.16■□□□□ 0.02
PTBP1-216ENST00000590887 KAT14Q9H8E8 782 aa15.16■□□□□ 0.02
PTBP1-216ENST00000590887 MYH8P13535 1937 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 DDX11L8A8MPP1 907 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 KIF5BP33176 963 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 ZNF280AP59817 542 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-216ENST00000590887 AKAP17AQ02040 695 aaKnown RBP15.15■□□□□ 0.02
PTBP1-216ENST00000590887 RASSF7Q02833 373 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 SEC23AQ15436 765 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 RTN1Q16799 776 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 FAM83AQ86UY5 434 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 ZNF654Q8IZM8 581 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-216ENST00000590887 SMARCC2Q8TAQ2 1214 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 FAM151AQ8WW52 585 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 ZKSCAN3Q9BRR0 538 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 MYOZ2Q9NPC6 264 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 ZNF70Q9UC06 446 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-216ENST00000590887 BRPF3Q9ULD4 1205 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-216ENST00000590887 GJA3Q9Y6H8 435 aa15.15■□□□□ 0.02
PTBP1-216ENST00000590887 NID2Q14112 1375 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 BRD1O95696 1058 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 RASA1P20936 1047 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 SYT1P21579 422 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 SSRP1Q08945 709 aaKnown RBP15.14■□□□□ 0.01
PTBP1-216ENST00000590887 CSPP1Q1MSJ5 1256 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 FAM47AQ5JRC9 791 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 MICU3Q86XE3 530 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 GPC2Q8N158 579 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 ENAHQ8N8S7 591 aaPredicted RBP15.14■□□□□ 0.01
PTBP1-216ENST00000590887 FANCBQ8NB91 859 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 NSUN7Q8NE18 718 aaKnown RBP15.14■□□□□ 0.01
PTBP1-216ENST00000590887 NUP133Q8WUM0 1156 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 TNPO1Q92973 898 aaKnown RBP15.14■□□□□ 0.01
PTBP1-216ENST00000590887 HOOK2Q96ED9 719 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 DYNLL2Q96FJ2 89 aa15.14■□□□□ 0.01
PTBP1-216ENST00000590887 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
PTBP1-216ENST00000590887 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
PTBP1-216ENST00000590887 DDX60LQ5H9U9 1706 aaKnown RBP15.14■□□□□ 0.01
PTBP1-216ENST00000590887 ATRNL1Q5VV63 1379 aa15.13■□□□□ 0.01
PTBP1-216ENST00000590887 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
PTBP1-216ENST00000590887 ZSCAN22P10073 491 aaPredicted RBP15.13■□□□□ 0.01
PTBP1-216ENST00000590887 XBP1P17861 261 aa15.13■□□□□ 0.01
PTBP1-216ENST00000590887 GABPAQ06546 454 aa15.13■□□□□ 0.01
PTBP1-216ENST00000590887 TCP10Q12799 353 aa15.13■□□□□ 0.01
PTBP1-216ENST00000590887 TRIM29Q14134 588 aa15.13■□□□□ 0.01
PTBP1-216ENST00000590887 DDX4Q9NQI0 724 aaKnown RBP15.13■□□□□ 0.01
PTBP1-216ENST00000590887 CNOT7Q9UIV1 285 aaKnown RBP15.13■□□□□ 0.01
PTBP1-216ENST00000590887 TACC3Q9Y6A5 838 aa15.13■□□□□ 0.01
PTBP1-216ENST00000590887 LMOD1P29536 600 aaPredicted RBP15.12■□□□□ 0.01
PTBP1-216ENST00000590887 GMPSP49915 693 aaPredicted RBP15.12■□□□□ 0.01
PTBP1-216ENST00000590887 COL9A3Q14050 684 aaPredicted RBP15.12■□□□□ 0.01
PTBP1-216ENST00000590887 NFKBIBQ15653 356 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 SLC4A8Q2Y0W8 1093 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 CLEC17AQ6ZS10 378 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 ZNF784Q8NCA9 323 aaPredicted RBP15.12■□□□□ 0.01
PTBP1-216ENST00000590887 LZTS2Q9BRK4 669 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 ANP32EQ9BTT0 268 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
PTBP1-216ENST00000590887 VEZTQ9HBM0 779 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 CABP5Q9NP86 173 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 GPHNQ9NQX3 736 aaPredicted RBP15.12■□□□□ 0.01
PTBP1-216ENST00000590887 ORC3Q9UBD5 711 aaPredicted RBP15.12■□□□□ 0.01
PTBP1-216ENST00000590887 FAM198AQ9UFP1 575 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 HPS5Q9UPZ3 1129 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 COL4A5P29400 1685 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 STK36Q9NRP7 1315 aa15.12■□□□□ 0.01
PTBP1-216ENST00000590887 PLIN4Q96Q06 1357 aa15.11■□□□□ 0.01
PTBP1-216ENST00000590887 VPS37CA5D8V6 355 aaPredicted RBP15.11■□□□□ 0.01
PTBP1-216ENST00000590887 TOP1P11387 765 aaKnown RBP15.11■□□□□ 0.01
PTBP1-216ENST00000590887 IFNAR1P17181 557 aa15.11■□□□□ 0.01
PTBP1-216ENST00000590887 ST3GAL1Q11201 340 aa15.11■□□□□ 0.01
PTBP1-216ENST00000590887 NFIAQ12857 509 aa15.11■□□□□ 0.01
PTBP1-216ENST00000590887 CERKLQ49MI3 558 aaPredicted RBP15.11■□□□□ 0.01
PTBP1-216ENST00000590887 DPY19L2Q6NUT2 758 aa15.11■□□□□ 0.01
PTBP1-216ENST00000590887 MICALL2Q8IY33 904 aa15.11■□□□□ 0.01
PTBP1-216ENST00000590887 DDX11Q96FC9 970 aa15.11■□□□□ 0.01
PTBP1-216ENST00000590887 STX8Q9UNK0 236 aa15.11■□□□□ 0.01
PTBP1-216ENST00000590887 TCP10L2B9ZVM9 353 aa15.1■□□□□ 0.01
PTBP1-216ENST00000590887 WNT10BO00744 389 aa15.1■□□□□ 0.01
PTBP1-216ENST00000590887 TBC1D12O60347 775 aa15.1■□□□□ 0.01
PTBP1-216ENST00000590887 RBM26Q5T8P6 1007 aaKnown RBP15.1■□□□□ 0.01
PTBP1-216ENST00000590887 METTL16Q86W50 562 aaKnown RBP15.1■□□□□ 0.01
PTBP1-216ENST00000590887 PNMA1Q8ND90 353 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms