RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 PRR33A8MZF0 331 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 KBTBD13C9JR72 458 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 MYCNP04198 464 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-222ENST00000590619 CLTBP09497 229 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 GNAI1P63096 354 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 ERVK-9P63128 1117 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 ERVK-24P63145 666 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 IRX3P78415 501 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-222ENST00000590619 TMEM240Q5SV17 173 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 CCAR1Q8IX12 1150 aaKnown RBP8.17□□□□□ -1.1
DNMT1-222ENST00000590619 WDR66Q8TBY9 1149 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 DNAAF4Q8WXU2 420 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 HERVK_113Q902F9 699 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 FBXL18Q96ME1 805 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 DDX4Q9NQI0 724 aaKnown RBP8.17□□□□□ -1.1
DNMT1-222ENST00000590619 TMEM39AQ9NV64 488 aa8.17□□□□□ -1.1
DNMT1-222ENST00000590619 FAM196BA6NMK8 535 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 USP17L5A8MUK1 530 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 PDE8BO95263 885 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 HOXC6P09630 235 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 CYBAP13498 195 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 PTPREP23469 700 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 PRDX5P30044 214 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 FAAP100Q0VG06 881 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 LRRC41Q15345 812 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 LRRC24Q50LG9 513 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 AK9Q5TCS8 1911 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 MROH5Q6ZUA9 1318 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 OSBPL5Q9H0X9 879 aaPredicted RBP8.16□□□□□ -1.1
DNMT1-222ENST00000590619 NKX2-4Q9H2Z4 354 aa8.16□□□□□ -1.1
DNMT1-222ENST00000590619 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.16□□□□□ -1.1
DNMT1-222ENST00000590619 MAST2Q6P0Q8 1798 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 SLC15A5A6NIM6 579 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 CNMDO75829 334 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 TIMP1P01033 207 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 CAP2P40123 477 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 BACE1P56817 501 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 SKIV2LQ15477 1246 aaKnown RBP8.15□□□□□ -1.1
DNMT1-222ENST00000590619 PRAMEF19Q5SWL8 479 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 MICALL1Q8N3F8 863 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 VGLL2Q8N8G2 317 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 SLC44A5Q8NCS7 719 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 PAGR1Q9BTK6 254 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 WDR18Q9BV38 432 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 STK31Q9BXU1 1019 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 TBC1D2Q9BYX2 928 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 SLC28A3Q9HAS3 691 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 MSRAQ9UJ68 235 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 YBX2Q9Y2T7 364 aaKnown RBP8.15□□□□□ -1.1
DNMT1-222ENST00000590619 CACNA1AO00555 2505 aa8.15□□□□□ -1.1
DNMT1-222ENST00000590619 MYBBP1AQ9BQG0 1328 aaKnown RBP8.14□□□□□ -1.11
DNMT1-222ENST00000590619 RLFQ13129 1914 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 SEPT4O43236 478 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 PQBP1O60828 265 aaKnown RBP8.14□□□□□ -1.11
DNMT1-222ENST00000590619 LDHBP07195 334 aaKnown RBP8.14□□□□□ -1.11
DNMT1-222ENST00000590619 FGFR2P21802 821 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 JAG1P78504 1218 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 FLIIQ13045 1269 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 PICALMQ13492 652 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 MTMR2Q13614 643 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 METTL24Q5JXM2 366 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 BEND3Q5T5X7 828 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 MFSD5Q6N075 450 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 ZNF365Q70YC5 407 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 KAZALD1Q96I82 304 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 UIMC1Q96RL1 719 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 PHOX2BQ99453 314 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 TMOD4Q9NZQ9 345 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 ADAMTS8Q9UP79 889 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 PHF24Q9UPV7 400 aa8.14□□□□□ -1.11
DNMT1-222ENST00000590619 PTPRFP10586 1907 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 PHIPQ8WWQ0 1821 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 C19orf81C9J6K1 198 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 RFXAPO00287 272 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 GLRX3O76003 335 aaKnown RBP8.13□□□□□ -1.11
DNMT1-222ENST00000590619 ACRP10323 421 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 POU3F3P20264 500 aaPredicted RBP8.13□□□□□ -1.11
DNMT1-222ENST00000590619 ZEB1P37275 1124 aaPredicted RBP8.13□□□□□ -1.11
DNMT1-222ENST00000590619 FKBP5Q13451 457 aaPredicted RBP8.13□□□□□ -1.11
DNMT1-222ENST00000590619 RAB30Q15771 203 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 ANKRD33Q7Z3H0 272 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 TOX2Q96NM4 488 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 AS3MTQ9HBK9 375 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 CWC22Q9HCG8 908 aaKnown RBP8.13□□□□□ -1.11
DNMT1-222ENST00000590619 EMILIN3Q9NT22 766 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 COG5Q9UP83 839 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 RABGAP1Q9Y3P9 1069 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 MTCH2Q9Y6C9 303 aa8.13□□□□□ -1.11
DNMT1-222ENST00000590619 CHD9Q3L8U1 2897 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 F6X3S4 739 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 GRM8O00222 908 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 IFIT1P09914 478 aaKnown RBP8.12□□□□□ -1.11
DNMT1-222ENST00000590619 MYOGP15173 224 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 CSF2RAP15509 400 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 RABGGTBP53611 331 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 FOXK2Q01167 660 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 GRB14Q14449 540 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 FAM47AQ5JRC9 791 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 WDR78Q5VTH9 848 aa8.12□□□□□ -1.11
DNMT1-222ENST00000590619 OLFML2BQ68BL8 750 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms