RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 STK11IPQ8N1F8 1099 aa16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 DYNLL2Q96FJ2 89 aa16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 ZBTB21Q9ULJ3 1066 aa16.85■□□□□ 0.29
SCAMP4-212ENST00000590266 A0A0G2JLL6 359 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-212ENST00000590266 FKTNO75072 461 aa16.84■□□□□ 0.29
SCAMP4-212ENST00000590266 RAB3GAP1Q15042 981 aa16.84■□□□□ 0.29
SCAMP4-212ENST00000590266 PRRT2Q7Z6L0 340 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-212ENST00000590266 SLC44A5Q8NCS7 719 aa16.84■□□□□ 0.29
SCAMP4-212ENST00000590266 ZNF280CQ8ND82 737 aa16.84■□□□□ 0.29
SCAMP4-212ENST00000590266 CFHR5Q9BXR6 569 aa16.84■□□□□ 0.29
SCAMP4-212ENST00000590266 AS3MTQ9HBK9 375 aa16.84■□□□□ 0.29
SCAMP4-212ENST00000590266 SMIM22K7EJ46 135 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 ECM2O94769 699 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 SHMT1P34896 483 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 TDO2P48775 406 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 HMGCS2P54868 508 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 MOGSQ13724 837 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 ABCB5Q2M3G0 1257 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 TATDN1Q6P1N9 297 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 CTR9Q6PD62 1173 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 CCDC129Q6ZRS4 1044 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 FASTKD5Q7L8L6 764 aaKnown RBP16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 ANKRD23Q86SG2 305 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 CABP5Q9NP86 173 aa16.83■□□□□ 0.28
SCAMP4-212ENST00000590266 GSG1L2A8MUP6 293 aa16.82■□□□□ 0.28
SCAMP4-212ENST00000590266 MINDY4BA8MYZ0 360 aa16.82■□□□□ 0.28
SCAMP4-212ENST00000590266 GNAT2P19087 354 aa16.82■□□□□ 0.28
SCAMP4-212ENST00000590266 MTMR2Q13614 643 aa16.82■□□□□ 0.28
SCAMP4-212ENST00000590266 ZYXQ15942 572 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-212ENST00000590266 C12orf60Q5U649 245 aa16.82■□□□□ 0.28
SCAMP4-212ENST00000590266 ARPP21Q9UBL0 812 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-212ENST00000590266 CASP8AP2Q9UKL3 1982 aa16.82■□□□□ 0.28
SCAMP4-212ENST00000590266 CYP2C8P10632 490 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 PDE4AP27815 886 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 GABPAQ06546 454 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 GPAT2Q6NUI2 795 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 CD99L2Q8TCZ2 262 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 FEZ1Q99689 392 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 TBC1D2Q9BYX2 928 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 EPB41L4AQ9HCS5 686 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 SWAP70Q9UH65 585 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 CPA4Q9UI42 421 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 SIPA1L1O43166 1804 aa16.81■□□□□ 0.28
SCAMP4-212ENST00000590266 SP3Q02447 781 aa16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 PKN2Q16513 984 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 TREML2Q5T2D2 321 aa16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 FAM227BQ96M60 508 aa16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 PARK7Q99497 189 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 OSBPL3Q9H4L5 887 aa16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 ZCCHC17Q9NP64 241 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 TMOD4Q9NZQ9 345 aa16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 FOCADQ5VW36 1801 aa16.8■□□□□ 0.28
SCAMP4-212ENST00000590266 A0A0D9SFI3 127 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 PATL2C9JE40 543 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 USP17L10C9JJH3 530 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 TLR2O60603 784 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 CDK8P49336 464 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 NMIQ13287 307 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 SEPT2Q15019 361 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 NOM1Q5C9Z4 860 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 WDR18Q9BV38 432 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 NACAP1Q9BZK3 213 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 NAPBQ9H115 298 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 GINM1Q9NU53 330 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 AGTPBP1Q9UPW5 1226 aa16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 DDX60LQ5H9U9 1706 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-212ENST00000590266 CDK5RAP2Q96SN8 1893 aa16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 NEFLP07196 543 aa16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 SOX10P56693 466 aa16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 BACE1P56817 501 aa16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 GIMAP6Q6P9H5 292 aa16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 PROCA1Q8NCQ7 364 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 SMCR8Q8TEV9 937 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 TRIM17Q9Y577 477 aa16.78■□□□□ 0.28
SCAMP4-212ENST00000590266 AKR1B1P15121 316 aa16.77■□□□□ 0.28
SCAMP4-212ENST00000590266 RGS19P49795 217 aa16.77■□□□□ 0.28
SCAMP4-212ENST00000590266 CLEC10AQ8IUN9 316 aa16.77■□□□□ 0.28
SCAMP4-212ENST00000590266 MKNK2Q9HBH9 465 aa16.77■□□□□ 0.28
SCAMP4-212ENST00000590266 HELLSQ9NRZ9 838 aa16.77■□□□□ 0.28
SCAMP4-212ENST00000590266 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.28
SCAMP4-212ENST00000590266 SDSP20132 328 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 GUCY1A2P33402 732 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 ATP2B2Q01814 1243 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 KIF22Q14807 665 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 MCMDC2Q4G0Z9 681 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 VPS53Q5VIR6 699 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 ACER1Q8TDN7 264 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 PNMA3Q9UL41 463 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 HPS5Q9UPZ3 1129 aa16.76■□□□□ 0.27
SCAMP4-212ENST00000590266 MYH1P12882 1939 aa16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 C19orf81C9J6K1 198 aa16.75■□□□□ 0.27
SCAMP4-212ENST00000590266 PRDM1O75626 825 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms