RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SHROOM1Q2M3G4 852 aaPredicted RBP14.54□□□□□ -0.08
TPM4-212ENST00000590180 LRRFIP1Q32MZ4 808 aaKnown RBP14.54□□□□□ -0.08
TPM4-212ENST00000590180 TATDN1Q6P1N9 297 aa14.54□□□□□ -0.08
TPM4-212ENST00000590180 C17orf99Q6UX52 265 aa14.54□□□□□ -0.08
TPM4-212ENST00000590180 AMOTL1Q8IY63 956 aa14.54□□□□□ -0.08
TPM4-212ENST00000590180 WDR18Q9BV38 432 aa14.54□□□□□ -0.08
TPM4-212ENST00000590180 CABP5Q9NP86 173 aa14.54□□□□□ -0.08
TPM4-212ENST00000590180 TMOD4Q9NZQ9 345 aa14.54□□□□□ -0.08
TPM4-212ENST00000590180 ZBTB21Q9ULJ3 1066 aa14.54□□□□□ -0.08
TPM4-212ENST00000590180 IGHDP01880 384 aa14.53□□□□□ -0.08
TPM4-212ENST00000590180 ZFYP08048 801 aaPredicted RBP14.53□□□□□ -0.08
TPM4-212ENST00000590180 IRX6P78412 446 aaPredicted RBP14.53□□□□□ -0.08
TPM4-212ENST00000590180 RAB3GAP1Q15042 981 aa14.53□□□□□ -0.08
TPM4-212ENST00000590180 ABCB5Q2M3G0 1257 aa14.53□□□□□ -0.08
TPM4-212ENST00000590180 PI4K2BQ8TCG2 481 aa14.53□□□□□ -0.08
TPM4-212ENST00000590180 FSD1Q9BTV5 496 aa14.53□□□□□ -0.08
TPM4-212ENST00000590180 LNPKQ9C0E8 428 aa14.53□□□□□ -0.08
TPM4-212ENST00000590180 AGTPBP1Q9UPW5 1226 aa14.53□□□□□ -0.08
TPM4-212ENST00000590180 C19orf81C9J6K1 198 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 USP17L10C9JJH3 530 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 USP17L12C9JPN9 530 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 USP17L21D6R901 530 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 MPHOSPH10O00566 681 aaKnown RBP14.52□□□□□ -0.09
TPM4-212ENST00000590180 FMNL1O95466 1100 aaPredicted RBP14.52□□□□□ -0.09
TPM4-212ENST00000590180 OSBPP22059 807 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 BACE1P56817 501 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 LACTBP83111 547 aaPredicted RBP14.52□□□□□ -0.09
TPM4-212ENST00000590180 CAP1Q01518 475 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 EVX2Q03828 476 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 PABPC4Q13310 644 aaKnown RBP eCLIP14.52□□□□□ -0.09
TPM4-212ENST00000590180 MTMR2Q13614 643 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 TREML2Q5T2D2 321 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 PROCA1Q8NCQ7 364 aaPredicted RBP14.52□□□□□ -0.09
TPM4-212ENST00000590180 SMCR8Q8TEV9 937 aaPredicted RBP14.52□□□□□ -0.09
TPM4-212ENST00000590180 APPBP2Q92624 585 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 OSBP2Q969R2 916 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 STRBPQ96SI9 672 aaKnown RBP14.52□□□□□ -0.09
TPM4-212ENST00000590180 ARHGAP39Q9C0H5 1083 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 PNMA3Q9UL41 463 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 SLC45A1Q9Y2W3 748 aa14.52□□□□□ -0.09
TPM4-212ENST00000590180 MYH1P12882 1939 aa14.51□□□□□ -0.09
TPM4-212ENST00000590180 CYP2D7A0A087X1C5 515 aa14.51□□□□□ -0.09
TPM4-212ENST00000590180 APPP05067 770 aa14.51□□□□□ -0.09
TPM4-212ENST00000590180 SHMT1P34896 483 aa14.51□□□□□ -0.09
TPM4-212ENST00000590180 PSMC4P43686 418 aa14.51□□□□□ -0.09
TPM4-212ENST00000590180 SH3D19Q5HYK7 790 aa14.51□□□□□ -0.09
TPM4-212ENST00000590180 DYNLL2Q96FJ2 89 aa14.51□□□□□ -0.09
TPM4-212ENST00000590180 HOXD10P28358 340 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 PDE1AP54750 535 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 GABPAQ06546 454 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 C12orf60Q5U649 245 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 USP17L2Q6R6M4 530 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 SMC5Q8IY18 1101 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 FEZ1Q99689 392 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 STAP2Q9UGK3 403 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 SWAP70Q9UH65 585 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 DOCK1Q14185 1865 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 CDK5RAP2Q96SN8 1893 aa14.5□□□□□ -0.09
TPM4-212ENST00000590180 MINDY4BA8MYZ0 360 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 GPAA1O43292 621 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 BCRP11274 1271 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 SOX10P56693 466 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 IRX3P78415 501 aaPredicted RBP14.49□□□□□ -0.09
TPM4-212ENST00000590180 SEPT2Q15019 361 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 ZYXQ15942 572 aaKnown RBP14.49□□□□□ -0.09
TPM4-212ENST00000590180 CTR9Q6PD62 1173 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 STK11IPQ8N1F8 1099 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 ANKRD13CQ8N6S4 541 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 SLC44A5Q8NCS7 719 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 LAMB1P07942 1786 aa14.49□□□□□ -0.09
TPM4-212ENST00000590180 ADGRA2Q96PE1 1338 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 SALL3Q9BXA9 1300 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 GSG1L2A8MUP6 293 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 PATL2C9JE40 543 aaKnown RBP14.48□□□□□ -0.09
TPM4-212ENST00000590180 SMIM22K7EJ46 135 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 M0R2C6 588 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 GNRH1P01148 92 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 GNAT2P19087 354 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 CDK8P49336 464 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 CHD1LQ86WJ1 897 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 ACER1Q8TDN7 264 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 EVI5LQ96CN4 794 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 SEC62Q99442 399 aaKnown RBP14.48□□□□□ -0.09
TPM4-212ENST00000590180 P2RX7Q99572 595 aaKnown RBP14.48□□□□□ -0.09
TPM4-212ENST00000590180 ASCC2Q9H1I8 757 aaPredicted RBP14.48□□□□□ -0.09
TPM4-212ENST00000590180 EMILIN3Q9NT22 766 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 SIPA1L1O43166 1804 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 FOCADQ5VW36 1801 aa14.48□□□□□ -0.09
TPM4-212ENST00000590180 TRIM6-TRIM34B2RNG4 842 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 CTGFP29279 349 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 GUCY1A2P33402 732 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 TDO2P48775 406 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 USP14P54578 494 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 FCGRTP55899 365 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 NUCB1Q02818 461 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 GIMAP6Q6P9H5 292 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 TRIM47Q96LD4 638 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 ARPP21Q9UBL0 812 aaPredicted RBP14.47□□□□□ -0.09
TPM4-212ENST00000590180 TAOK2Q9UL54 1235 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms