RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 SERPINB13Q9UIV8 391 aa24.91■■□□□ 1.58
CIRBP-226ENST00000590171 GNRH1P01148 92 aa24.9■■□□□ 1.58
CIRBP-226ENST00000590171 PSMC4P43686 418 aa24.9■■□□□ 1.58
CIRBP-226ENST00000590171 PLCD1P51178 756 aa24.9■■□□□ 1.58
CIRBP-226ENST00000590171 TATDN1Q6P1N9 297 aa24.9■■□□□ 1.58
CIRBP-226ENST00000590171 SDR42E1Q8WUS8 393 aa24.9■■□□□ 1.58
CIRBP-226ENST00000590171 MTMR2Q13614 643 aa24.89■■□□□ 1.58
CIRBP-226ENST00000590171 SMCR8Q8TEV9 937 aaPredicted RBP24.89■■□□□ 1.58
CIRBP-226ENST00000590171 NAV1Q8NEY1 1877 aa24.89■■□□□ 1.57
CIRBP-226ENST00000590171 MBD4O95243 580 aa24.88■■□□□ 1.57
CIRBP-226ENST00000590171 BACE1P56817 501 aa24.88■■□□□ 1.57
CIRBP-226ENST00000590171 EVX2Q03828 476 aa24.88■■□□□ 1.57
CIRBP-226ENST00000590171 TSHZ3Q63HK5 1081 aa24.88■■□□□ 1.57
CIRBP-226ENST00000590171 DCP1AQ9NPI6 582 aaPredicted RBP24.88■■□□□ 1.57
CIRBP-226ENST00000590171 MCM9Q9NXL9 1143 aa24.88■■□□□ 1.57
CIRBP-226ENST00000590171 PNMA3Q9UL41 463 aa24.88■■□□□ 1.57
CIRBP-226ENST00000590171 FMNL1O95466 1100 aaPredicted RBP24.87■■□□□ 1.57
CIRBP-226ENST00000590171 GH2P01242 217 aa24.87■■□□□ 1.57
CIRBP-226ENST00000590171 POLR3DP05423 398 aaPredicted RBP24.87■■□□□ 1.57
CIRBP-226ENST00000590171 OSBPP22059 807 aa24.87■■□□□ 1.57
CIRBP-226ENST00000590171 PRMT2P55345 433 aa24.87■■□□□ 1.57
CIRBP-226ENST00000590171 UBE3CQ15386 1083 aa24.87■■□□□ 1.57
CIRBP-226ENST00000590171 GPATCH3Q96I76 525 aa24.87■■□□□ 1.57
CIRBP-226ENST00000590171 PRKAB2O43741 272 aa24.86■■□□□ 1.57
CIRBP-226ENST00000590171 SHMT1P34896 483 aa24.86■■□□□ 1.57
CIRBP-226ENST00000590171 GABPAQ06546 454 aa24.86■■□□□ 1.57
CIRBP-226ENST00000590171 SLC9C1Q4G0N8 1177 aa24.86■■□□□ 1.57
CIRBP-226ENST00000590171 ZNF333Q96JL9 665 aa24.86■■□□□ 1.57
CIRBP-226ENST00000590171 SRRDQ9UH36 339 aa24.86■■□□□ 1.57
CIRBP-226ENST00000590171 USP17L10C9JJH3 530 aa24.85■■□□□ 1.57
CIRBP-226ENST00000590171 FCGRTP55899 365 aa24.85■■□□□ 1.57
CIRBP-226ENST00000590171 PABPC4Q13310 644 aaKnown RBP eCLIP24.85■■□□□ 1.572e-9■□□□□ 10
CIRBP-226ENST00000590171 CERKLQ49MI3 558 aaPredicted RBP24.85■■□□□ 1.57
CIRBP-226ENST00000590171 ZSCAN25Q6NSZ9 544 aa24.85■■□□□ 1.57
CIRBP-226ENST00000590171 POTEFA5A3E0 1075 aa24.84■■□□□ 1.57
CIRBP-226ENST00000590171 C19orf81C9J6K1 198 aa24.84■■□□□ 1.57
CIRBP-226ENST00000590171 CYP2D6P10635 497 aa24.84■■□□□ 1.57
CIRBP-226ENST00000590171 ANKRD13CQ8N6S4 541 aa24.84■■□□□ 1.57
CIRBP-226ENST00000590171 SH3TC2Q8TF17 1288 aa24.84■■□□□ 1.57
CIRBP-226ENST00000590171 ASCC2Q9H1I8 757 aaPredicted RBP24.84■■□□□ 1.57
CIRBP-226ENST00000590171 TMOD4Q9NZQ9 345 aa24.84■■□□□ 1.57
CIRBP-226ENST00000590171 MYPNQ86TC9 1320 aa24.84■■□□□ 1.57
CIRBP-226ENST00000590171 HOXD10P28358 340 aa24.83■■□□□ 1.57
CIRBP-226ENST00000590171 ABCB5Q2M3G0 1257 aa24.83■■□□□ 1.57
CIRBP-226ENST00000590171 KBTBD3Q8NAB2 608 aa24.83■■□□□ 1.57
CIRBP-226ENST00000590171 PUS7LQ9H0K6 701 aaKnown RBP24.83■■□□□ 1.57
CIRBP-226ENST00000590171 PRKCZQ05513 592 aa24.82■■□□□ 1.56
CIRBP-226ENST00000590171 FAM110CQ1W6H9 321 aa24.82■■□□□ 1.56
CIRBP-226ENST00000590171 NBPF11Q86T75 865 aa24.82■■□□□ 1.56
CIRBP-226ENST00000590171 OTUD7AQ8TE49 926 aaPredicted RBP24.82■■□□□ 1.56
CIRBP-226ENST00000590171 ATP8A2Q9NTI2 1148 aa24.82■■□□□ 1.56
CIRBP-226ENST00000590171 RAB3GAP1Q15042 981 aa24.81■■□□□ 1.56
CIRBP-226ENST00000590171 EMILIN3Q9NT22 766 aa24.81■■□□□ 1.56
CIRBP-226ENST00000590171 TTC41PQ6P2S7 1318 aa24.81■■□□□ 1.56
CIRBP-226ENST00000590171 MYH7P12883 1935 aa24.8■■□□□ 1.56
CIRBP-226ENST00000590171 HOXA7P31268 230 aaPredicted RBP24.8■■□□□ 1.56
CIRBP-226ENST00000590171 GCLCP48506 637 aaPredicted RBP24.8■■□□□ 1.56
CIRBP-226ENST00000590171 SLC44A5Q8NCS7 719 aa24.8■■□□□ 1.56
CIRBP-226ENST00000590171 PI4K2BQ8TCG2 481 aa24.8■■□□□ 1.56
CIRBP-226ENST00000590171 RAET1EQ8TD07 263 aa24.8■■□□□ 1.56
CIRBP-226ENST00000590171 CABP5Q9NP86 173 aa24.8■■□□□ 1.56
CIRBP-226ENST00000590171 GABRQQ9UN88 632 aa24.8■■□□□ 1.56
CIRBP-226ENST00000590171 GUCY1A2P33402 732 aa24.79■■□□□ 1.56
CIRBP-226ENST00000590171 IRX3P78415 501 aaPredicted RBP24.79■■□□□ 1.56
CIRBP-226ENST00000590171 USP17L2Q6R6M4 530 aa24.79■■□□□ 1.56
CIRBP-226ENST00000590171 DYNLL2Q96FJ2 89 aa24.79■■□□□ 1.56
CIRBP-226ENST00000590171 SLC4A4Q9Y6R1 1079 aa24.79■■□□□ 1.56
CIRBP-226ENST00000590171 RBBP6Q7Z6E9 1792 aaKnown RBP24.78■■□□□ 1.56
CIRBP-226ENST00000590171 SMIM22K7EJ46 135 aa24.78■■□□□ 1.56
CIRBP-226ENST00000590171 TNPO2O14787 897 aaKnown RBP24.78■■□□□ 1.56
CIRBP-226ENST00000590171 MYCP01106 439 aaPredicted RBP24.78■■□□□ 1.56
CIRBP-226ENST00000590171 ZYXQ15942 572 aaKnown RBP24.78■■□□□ 1.56
CIRBP-226ENST00000590171 ACER1Q8TDN7 264 aa24.78■■□□□ 1.56
CIRBP-226ENST00000590171 C12orf42Q96LP6 360 aa24.78■■□□□ 1.56
CIRBP-226ENST00000590171 FEZ1Q99689 392 aa24.78■■□□□ 1.56
CIRBP-226ENST00000590171 CENPFP49454 3210 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 MGAMO43451 1857 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 CYP2D7A0A087X1C5 515 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 USP17L12C9JPN9 530 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 USP17L21D6R901 530 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 HDAC1Q13547 482 aaPredicted RBP24.77■■□□□ 1.56
CIRBP-226ENST00000590171 SEPT2Q15019 361 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 C12orf60Q5U649 245 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 APPBP2Q92624 585 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 OSBP2Q969R2 916 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 P2RX7Q99572 595 aaKnown RBP24.77■■□□□ 1.56
CIRBP-226ENST00000590171 KIAA1683Q9H0B3 1180 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 SWAP70Q9UH65 585 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 SALL3Q9BXA9 1300 aa24.77■■□□□ 1.56
CIRBP-226ENST00000590171 MPHOSPH10O00566 681 aaKnown RBP24.76■■□□□ 1.55
CIRBP-226ENST00000590171 ERC2O15083 957 aa24.76■■□□□ 1.55
CIRBP-226ENST00000590171 RNF113AO15541 343 aaKnown RBP24.76■■□□□ 1.55
CIRBP-226ENST00000590171 MX1P20591 662 aa24.76■■□□□ 1.55
CIRBP-226ENST00000590171 GRK4P32298 578 aa24.76■■□□□ 1.55
CIRBP-226ENST00000590171 HERVK_113P62684 666 aa24.76■■□□□ 1.55
CIRBP-226ENST00000590171 STRBPQ96SI9 672 aaKnown RBP24.76■■□□□ 1.55
CIRBP-226ENST00000590171 TMEM106CQ9BVX2 250 aa24.76■■□□□ 1.55
CIRBP-226ENST00000590171 MORF4L1Q9UBU8 362 aa24.76■■□□□ 1.55
CIRBP-226ENST00000590171 TAOK2Q9UL54 1235 aa24.76■■□□□ 1.55
CIRBP-226ENST00000590171 GLRX3O76003 335 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms