RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 CCAR1Q8IX12 1150 aaKnown RBP17.33■□□□□ 0.36
CROCCP3-204ENST00000590118 APBA2Q99767 749 aa17.33■□□□□ 0.36
CROCCP3-204ENST00000590118 SENP6Q9GZR1 1112 aaPredicted RBP17.33■□□□□ 0.36
CROCCP3-204ENST00000590118 SIPA1L1O43166 1804 aa17.33■□□□□ 0.36
CROCCP3-204ENST00000590118 MAST2Q6P0Q8 1798 aa17.33■□□□□ 0.36
CROCCP3-204ENST00000590118 VCANP13611 3396 aa17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 USP17L10C9JJH3 530 aa17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 JAG1P78504 1218 aa17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 MVPQ14764 893 aaKnown RBP17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 POTEEQ6S8J3 1075 aa17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 TBC1D9Q6ZT07 1266 aa17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 TEX11Q8IYF3 940 aa17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 GTF3C2Q8WUA4 911 aaPredicted RBP17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 CDX2Q99626 313 aaPredicted RBP17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 HMG20BQ9P0W2 317 aa17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
CROCCP3-204ENST00000590118 MAP2K5Q13163 448 aa17.31■□□□□ 0.36
CROCCP3-204ENST00000590118 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
CROCCP3-204ENST00000590118 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
CROCCP3-204ENST00000590118 TFCP2Q12800 502 aa17.3■□□□□ 0.36
CROCCP3-204ENST00000590118 PI16Q6UXB8 463 aa17.3■□□□□ 0.36
CROCCP3-204ENST00000590118 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
CROCCP3-204ENST00000590118 EDC3Q96F86 508 aaKnown RBP17.3■□□□□ 0.36
CROCCP3-204ENST00000590118 DNAJC18Q9H819 358 aa17.3■□□□□ 0.36
CROCCP3-204ENST00000590118 GINM1Q9NU53 330 aa17.3■□□□□ 0.36
CROCCP3-204ENST00000590118 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
CROCCP3-204ENST00000590118 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
CROCCP3-204ENST00000590118 LTBP2Q14767 1821 aa17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 ATN1P54259 1190 aaPredicted RBP17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 SHROOM1Q2M3G4 852 aaPredicted RBP17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 MFSD14CQ5VZR4 134 aa17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 MAFAQ8NHW3 353 aaPredicted RBP17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 SH3RF3Q8TEJ3 882 aaPredicted RBP17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 SEMA6BQ9H3T3 888 aa17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 PRDM6Q9NQX0 595 aa17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 EMILIN3Q9NT22 766 aa17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 FLRT1Q9NZU1 646 aa17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 PRKAG2Q9UGJ0 569 aa17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 DDX20Q9UHI6 824 aaKnown RBP17.29■□□□□ 0.36
CROCCP3-204ENST00000590118 MSCO60682 206 aa17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 GDF11O95390 407 aa17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 RTP1P59025 263 aa17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 ALDH1L2Q3SY69 923 aa17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 METTL16Q86W50 562 aaKnown RBP17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 FOXP4Q8IVH2 680 aaPredicted RBP17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 LPAR1Q92633 364 aa17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 CWC22Q9HCG8 908 aaKnown RBP17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 ZBTB21Q9ULJ3 1066 aa17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 LAMA2P24043 3122 aaKnown RBP17.28■□□□□ 0.36
CROCCP3-204ENST00000590118 RLFQ13129 1914 aa17.27■□□□□ 0.36
CROCCP3-204ENST00000590118 CDK5RAP2Q96SN8 1893 aa17.27■□□□□ 0.36
CROCCP3-204ENST00000590118 SHHQ15465 462 aa17.27■□□□□ 0.36
CROCCP3-204ENST00000590118 USP17L2Q6R6M4 530 aa17.27■□□□□ 0.36
CROCCP3-204ENST00000590118 RABGAP1Q9Y3P9 1069 aa17.27■□□□□ 0.36
CROCCP3-204ENST00000590118 E9PSI1 815 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 DNM1LO00429 736 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 CNMDO75829 334 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 GLRX3O76003 335 aaKnown RBP17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 ARID4AP29374 1257 aaPredicted RBP17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 CCNA1P78396 465 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 C9orf50Q5SZB4 431 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 CRACR2BQ8N4Y2 399 aaPredicted RBP17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 NOL10Q9BSC4 688 aaKnown RBP17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 SMC4Q9NTJ3 1288 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 AATFQ9NY61 560 aaKnown RBP eCLIP17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 LRP2BPQ9P2M1 347 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 DNAH12Q6ZR08 3092 aa17.26■□□□□ 0.35
CROCCP3-204ENST00000590118 SLC15A5A6NIM6 579 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 ANP32CO43423 234 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 BAG3O95817 575 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 HOXC6P09630 235 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 PLCG2P16885 1265 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 PTPREP23469 700 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 CNGA1P29973 690 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 MCAMP43121 646 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 TGFBRAP1Q8WUH2 860 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 MYLIPQ8WY64 445 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 MEIS3Q99687 375 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 TRIM34Q9BYJ4 488 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 PALD1Q9ULE6 856 aa17.25■□□□□ 0.35
CROCCP3-204ENST00000590118 FLT1P17948 1338 aa17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 SPTBN5Q9NRC6 3674 aaKnown RBP17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 FOCADQ5VW36 1801 aa17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 PPP4CP60510 307 aa17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 ATP2B2Q01814 1243 aa17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 NPLOC4Q8TAT6 608 aa17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 C12orf42Q96LP6 360 aa17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 TTYH1Q9H313 450 aaPredicted RBP17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 ATP11BQ9Y2G3 1177 aa17.24■□□□□ 0.35
CROCCP3-204ENST00000590118 EYSQ5T1H1 3165 aa17.23■□□□□ 0.35
CROCCP3-204ENST00000590118 USP17L15C9J2P7 530 aa17.23■□□□□ 0.35
CROCCP3-204ENST00000590118 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
CROCCP3-204ENST00000590118 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms