RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 DYNLL2Q96FJ2 89 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 GINM1Q9NU53 330 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 WBP1LQ9NX94 342 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 ZHX2Q9Y6X8 837 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 MYH8P13535 1937 aa25.43■■□□□ 1.66
ATG4D-212ENST00000590096 SHMT1P34896 483 aa25.43■■□□□ 1.66
ATG4D-212ENST00000590096 BMP2KLQ5H9B9 411 aa25.43■■□□□ 1.66
ATG4D-212ENST00000590096 VPS53Q5VIR6 699 aa25.43■■□□□ 1.66
ATG4D-212ENST00000590096 RUFY2Q8WXA3 655 aa25.43■■□□□ 1.66
ATG4D-212ENST00000590096 TM4SF4P48230 202 aa25.42■■□□□ 1.66
ATG4D-212ENST00000590096 SNAPC2Q13487 334 aa25.42■■□□□ 1.66
ATG4D-212ENST00000590096 USP17L5A8MUK1 530 aa25.41■■□□□ 1.66
ATG4D-212ENST00000590096 HSPD1P10809 573 aaKnown RBP25.41■■□□□ 1.66
ATG4D-212ENST00000590096 CHMLP26374 656 aa25.41■■□□□ 1.66
ATG4D-212ENST00000590096 C16orf86Q6ZW13 317 aa25.41■■□□□ 1.66
ATG4D-212ENST00000590096 SLC44A5Q8NCS7 719 aa25.41■■□□□ 1.66
ATG4D-212ENST00000590096 TBC1D2Q9BYX2 928 aa25.41■■□□□ 1.66
ATG4D-212ENST00000590096 AS3MTQ9HBK9 375 aa25.41■■□□□ 1.66
ATG4D-212ENST00000590096 CABP5Q9NP86 173 aa25.41■■□□□ 1.66
ATG4D-212ENST00000590096 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.41■■□□□ 1.66
ATG4D-212ENST00000590096 ZBTB21Q9ULJ3 1066 aa25.41■■□□□ 1.66
ATG4D-212ENST00000590096 KCNH4Q9UQ05 1017 aa25.41■■□□□ 1.66
ATG4D-212ENST00000590096 RAD50Q92878 1312 aa25.4■■□□□ 1.66
ATG4D-212ENST00000590096 CCL15-CCL14A0A0B4J2E2 113 aa25.4■■□□□ 1.66
ATG4D-212ENST00000590096 FOXP2O15409 715 aa25.4■■□□□ 1.66
ATG4D-212ENST00000590096 CETPP11597 493 aa25.4■■□□□ 1.66
ATG4D-212ENST00000590096 CDK8P49336 464 aa25.4■■□□□ 1.66
ATG4D-212ENST00000590096 CCL15Q16663 113 aa25.4■■□□□ 1.66
ATG4D-212ENST00000590096 ABCB5Q2M3G0 1257 aa25.4■■□□□ 1.66
ATG4D-212ENST00000590096 MS4A4AQ96JQ5 239 aa25.4■■□□□ 1.66
ATG4D-212ENST00000590096 SMIM22K7EJ46 135 aa25.39■■□□□ 1.66
ATG4D-212ENST00000590096 CXCL11O14625 94 aa25.39■■□□□ 1.66
ATG4D-212ENST00000590096 CA12O43570 354 aa25.39■■□□□ 1.66
ATG4D-212ENST00000590096 GH2P01242 217 aa25.39■■□□□ 1.66
ATG4D-212ENST00000590096 SLC3A2P08195 630 aaKnown RBP25.39■■□□□ 1.66
ATG4D-212ENST00000590096 ALX1Q15699 326 aa25.39■■□□□ 1.66
ATG4D-212ENST00000590096 OTUD7BQ6GQQ9 843 aa25.39■■□□□ 1.66
ATG4D-212ENST00000590096 CCDC84Q86UT8 332 aaPredicted RBP25.39■■□□□ 1.66
ATG4D-212ENST00000590096 AFG3L2Q9Y4W6 797 aa25.39■■□□□ 1.66
ATG4D-212ENST00000590096 ROBO3Q96MS0 1386 aa25.39■■□□□ 1.65
ATG4D-212ENST00000590096 PHIPQ8WWQ0 1821 aa25.39■■□□□ 1.65
ATG4D-212ENST00000590096 TESPA1A2RU30 521 aaPredicted RBP25.38■■□□□ 1.65
ATG4D-212ENST00000590096 TRIM75PA6NK02 468 aa25.38■■□□□ 1.65
ATG4D-212ENST00000590096 MPHOSPH10O00566 681 aaKnown RBP25.38■■□□□ 1.65
ATG4D-212ENST00000590096 PPARAQ07869 468 aa25.38■■□□□ 1.65
ATG4D-212ENST00000590096 STK11IPQ8N1F8 1099 aa25.38■■□□□ 1.65
ATG4D-212ENST00000590096 ZNF287Q9HBT7 754 aa25.38■■□□□ 1.65
ATG4D-212ENST00000590096 JAG1P78504 1218 aa25.37■■□□□ 1.65
ATG4D-212ENST00000590096 SHROOM1Q2M3G4 852 aaPredicted RBP25.37■■□□□ 1.65
ATG4D-212ENST00000590096 IFNL1Q8IU54 200 aa25.37■■□□□ 1.65
ATG4D-212ENST00000590096 ZNF280CQ8ND82 737 aa25.37■■□□□ 1.65
ATG4D-212ENST00000590096 BRI3BPQ8WY22 251 aa25.37■■□□□ 1.65
ATG4D-212ENST00000590096 CCDC17Q96LX7 622 aa25.37■■□□□ 1.65
ATG4D-212ENST00000590096 MKNK2Q9HBH9 465 aa25.37■■□□□ 1.65
ATG4D-212ENST00000590096 ZMYM6O95789 1325 aa25.37■■□□□ 1.65
ATG4D-212ENST00000590096 TRPA1O75762 1119 aa25.36■■□□□ 1.65
ATG4D-212ENST00000590096 ALDH1A1P00352 501 aa25.36■■□□□ 1.65
ATG4D-212ENST00000590096 FGAP02671 866 aa25.36■■□□□ 1.65
ATG4D-212ENST00000590096 PDE4BQ07343 736 aa25.36■■□□□ 1.65
ATG4D-212ENST00000590096 RAB3GAP1Q15042 981 aa25.36■■□□□ 1.65
ATG4D-212ENST00000590096 RNF186Q9NXI6 227 aa25.36■■□□□ 1.65
ATG4D-212ENST00000590096 SAGE1Q9NXZ1 904 aa25.36■■□□□ 1.65
ATG4D-212ENST00000590096 IGF2BP3O00425 579 aaKnown RBP eCLIP25.35■■□□□ 1.65
ATG4D-212ENST00000590096 CAPN15O75808 1086 aa25.35■■□□□ 1.65
ATG4D-212ENST00000590096 SPP2Q13103 211 aa25.35■■□□□ 1.65
ATG4D-212ENST00000590096 DSCC1Q9BVC3 393 aa25.35■■□□□ 1.65
ATG4D-212ENST00000590096 A0A0G2JLL6 359 aaPredicted RBP25.34■■□□□ 1.65
ATG4D-212ENST00000590096 FOXN1O15353 648 aa25.34■■□□□ 1.65
ATG4D-212ENST00000590096 TMEM179Q6ZVK1 233 aa25.34■■□□□ 1.65
ATG4D-212ENST00000590096 PRRT2Q7Z6L0 340 aaPredicted RBP25.34■■□□□ 1.65
ATG4D-212ENST00000590096 WDR18Q9BV38 432 aa25.34■■□□□ 1.65
ATG4D-212ENST00000590096 AKR1B1P15121 316 aa25.33■■□□□ 1.65
ATG4D-212ENST00000590096 CASC1Q6TDU7 716 aa25.33■■□□□ 1.65
ATG4D-212ENST00000590096 FASTKD5Q7L8L6 764 aaKnown RBP25.33■■□□□ 1.65
ATG4D-212ENST00000590096 PTPN18Q99952 460 aa25.33■■□□□ 1.65
ATG4D-212ENST00000590096 IL25Q9H293 177 aa25.33■■□□□ 1.65
ATG4D-212ENST00000590096 PTPRFP10586 1907 aa25.33■■□□□ 1.65
ATG4D-212ENST00000590096 SGSM2O43147 1006 aa25.32■■□□□ 1.64
ATG4D-212ENST00000590096 CTCFP49711 727 aaPredicted RBP25.32■■□□□ 1.64
ATG4D-212ENST00000590096 CTDSPL2Q05D32 466 aa25.32■■□□□ 1.64
ATG4D-212ENST00000590096 SEPT2Q15019 361 aa25.32■■□□□ 1.64
ATG4D-212ENST00000590096 GADL1Q6ZQY3 521 aa25.32■■□□□ 1.64
ATG4D-212ENST00000590096 ZNF444Q8N0Y2 327 aaPredicted RBP25.32■■□□□ 1.64
ATG4D-212ENST00000590096 ANAPC4Q9UJX5 808 aa25.32■■□□□ 1.64
ATG4D-212ENST00000590096 BTBD19C9JJ37 291 aa25.31■■□□□ 1.64
ATG4D-212ENST00000590096 USP17L10C9JJH3 530 aa25.31■■□□□ 1.64
ATG4D-212ENST00000590096 PRDM1O75626 825 aa25.31■■□□□ 1.64
ATG4D-212ENST00000590096 RASA1P20936 1047 aa25.31■■□□□ 1.64
ATG4D-212ENST00000590096 CTNNA3Q9UI47 895 aa25.31■■□□□ 1.64
ATG4D-212ENST00000590096 TSKSQ9UJT2 592 aa25.31■■□□□ 1.64
ATG4D-212ENST00000590096 CDC45O75419 566 aa25.3■■□□□ 1.64
ATG4D-212ENST00000590096 GUCY1A2P33402 732 aa25.3■■□□□ 1.64
ATG4D-212ENST00000590096 HMGCS2P54868 508 aa25.3■■□□□ 1.64
ATG4D-212ENST00000590096 BACE1P56817 501 aa25.3■■□□□ 1.64
ATG4D-212ENST00000590096 MTMR2Q13614 643 aa25.3■■□□□ 1.64
ATG4D-212ENST00000590096 ANKRD23Q86SG2 305 aa25.3■■□□□ 1.64
ATG4D-212ENST00000590096 FAM43AQ8N2R8 423 aa25.3■■□□□ 1.64
ATG4D-212ENST00000590096 FEZ1Q99689 392 aa25.3■■□□□ 1.64
ATG4D-212ENST00000590096 ZCCHC17Q9NP64 241 aaKnown RBP25.3■■□□□ 1.64
ATG4D-212ENST00000590096 C19orf81C9J6K1 198 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms