RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
SF3A2-205ENST00000590034 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
SF3A2-205ENST00000590034 PALD1Q9ULE6 856 aa17.08■□□□□ 0.32
SF3A2-205ENST00000590034 SOX1O00570 391 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-205ENST00000590034 BAG3O95817 575 aa17.07■□□□□ 0.32
SF3A2-205ENST00000590034 ASNSP08243 561 aa17.07■□□□□ 0.32
SF3A2-205ENST00000590034 HOXA7P31268 230 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-205ENST00000590034 ZAP70P43403 619 aa17.07■□□□□ 0.32
SF3A2-205ENST00000590034 POTEEQ6S8J3 1075 aa17.07■□□□□ 0.32
SF3A2-205ENST00000590034 TLR7Q9NYK1 1049 aaKnown RBP17.07■□□□□ 0.32
SF3A2-205ENST00000590034 COL6A3P12111 3177 aa17.06■□□□□ 0.32
SF3A2-205ENST00000590034 RPTORQ8N122 1335 aa17.06■□□□□ 0.32
SF3A2-205ENST00000590034 PLCG2P16885 1265 aa17.06■□□□□ 0.32
SF3A2-205ENST00000590034 CAPN2P17655 700 aa17.06■□□□□ 0.32
SF3A2-205ENST00000590034 HERVK_113P62684 666 aa17.06■□□□□ 0.32
SF3A2-205ENST00000590034 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
SF3A2-205ENST00000590034 IRX3P78415 501 aaPredicted RBP17.06■□□□□ 0.32
SF3A2-205ENST00000590034 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
SF3A2-205ENST00000590034 NECAB2Q7Z6G3 386 aa17.06■□□□□ 0.32
SF3A2-205ENST00000590034 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
SF3A2-205ENST00000590034 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
SF3A2-205ENST00000590034 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
SF3A2-205ENST00000590034 ZBTB21Q9ULJ3 1066 aa17.06■□□□□ 0.32
SF3A2-205ENST00000590034 SURF6O75683 361 aaKnown RBP17.05■□□□□ 0.32
SF3A2-205ENST00000590034 CYP2B6P20813 491 aa17.05■□□□□ 0.32
SF3A2-205ENST00000590034 ATP8B2P98198 1209 aa17.05■□□□□ 0.32
SF3A2-205ENST00000590034 MAP3K21Q5TCX8 1036 aa17.05■□□□□ 0.32
SF3A2-205ENST00000590034 ZKSCAN2Q63HK3 967 aa17.05■□□□□ 0.32
SF3A2-205ENST00000590034 FOXP4Q8IVH2 680 aaPredicted RBP17.05■□□□□ 0.32
SF3A2-205ENST00000590034 ANKLE1Q8NAG6 615 aa17.05■□□□□ 0.32
SF3A2-205ENST00000590034 ZNF512BQ96KM6 892 aaPredicted RBP17.05■□□□□ 0.32
SF3A2-205ENST00000590034 HMX1Q9NP08 348 aaPredicted RBP17.05■□□□□ 0.32
SF3A2-205ENST00000590034 TMOD4Q9NZQ9 345 aa17.05■□□□□ 0.32
SF3A2-205ENST00000590034 RBPJLQ9UBG7 517 aa17.05■□□□□ 0.32
SF3A2-205ENST00000590034 FRMPD3Q5JV73 1810 aa17.05■□□□□ 0.32
SF3A2-205ENST00000590034 A0A1W2PPC1 479 aa17.04■□□□□ 0.32
SF3A2-205ENST00000590034 C19orf81C9J6K1 198 aa17.04■□□□□ 0.32
SF3A2-205ENST00000590034 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
SF3A2-205ENST00000590034 Q3C1V9 767 aa17.04■□□□□ 0.32
SF3A2-205ENST00000590034 C7orf61Q8IZ16 206 aa17.04■□□□□ 0.32
SF3A2-205ENST00000590034 CRACR2BQ8N4Y2 399 aaPredicted RBP17.04■□□□□ 0.32
SF3A2-205ENST00000590034 LRCH3Q96II8 777 aa17.04■□□□□ 0.32
SF3A2-205ENST00000590034 PORCNQ9H237 461 aa17.04■□□□□ 0.32
SF3A2-205ENST00000590034 EMILIN3Q9NT22 766 aa17.04■□□□□ 0.32
SF3A2-205ENST00000590034 USP17L10C9JJH3 530 aa17.03■□□□□ 0.32
SF3A2-205ENST00000590034 PRKAR2AP13861 404 aaKnown RBP17.03■□□□□ 0.32
SF3A2-205ENST00000590034 GPRC5AQ8NFJ5 357 aa17.03■□□□□ 0.32
SF3A2-205ENST00000590034 USP6NLQ92738 828 aa17.03■□□□□ 0.32
SF3A2-205ENST00000590034 EAF2Q96CJ1 260 aaPredicted RBP17.03■□□□□ 0.32
SF3A2-205ENST00000590034 CCDC8Q9H0W5 538 aaPredicted RBP17.03■□□□□ 0.32
SF3A2-205ENST00000590034 OGDHLQ9ULD0 1010 aa17.03■□□□□ 0.32
SF3A2-205ENST00000590034 NOP58Q9Y2X3 529 aaKnown RBP17.03■□□□□ 0.32
SF3A2-205ENST00000590034 NDUFB9Q9Y6M9 179 aa17.03■□□□□ 0.32
SF3A2-205ENST00000590034 PFASO15067 1338 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 GH2P01242 217 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 RLBP1P12271 317 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 CYP7A1P22680 504 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 ERVK-9P63128 1117 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 ERVK-24P63145 666 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 MIGA1Q8NAN2 632 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 SOCS4Q8WXH5 440 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 GDF15Q99988 308 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 NUDT12Q9BQG2 462 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 TRIM34Q9BYJ4 488 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 NBPF3Q9H094 633 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 GINM1Q9NU53 330 aa17.02■□□□□ 0.32
SF3A2-205ENST00000590034 ZMYND8Q9ULU4 1186 aaPredicted RBP17.02■□□□□ 0.32
SF3A2-205ENST00000590034 HLA-DOAP06340 250 aa17.01■□□□□ 0.31
SF3A2-205ENST00000590034 XRCC5P13010 732 aaKnown RBP17.01■□□□□ 0.31
SF3A2-205ENST00000590034 CCL14Q16627 93 aa17.01■□□□□ 0.31
SF3A2-205ENST00000590034 PAGR1Q9BTK6 254 aa17.01■□□□□ 0.31
SF3A2-205ENST00000590034 C11orf49Q9H6J7 331 aa17.01■□□□□ 0.31
SF3A2-205ENST00000590034 ANTXR1Q9H6X2 564 aa17.01■□□□□ 0.31
SF3A2-205ENST00000590034 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
SF3A2-205ENST00000590034 IGSF3O75054 1194 aa17■□□□□ 0.31
SF3A2-205ENST00000590034 CNMDO75829 334 aa17■□□□□ 0.31
SF3A2-205ENST00000590034 IDH1O75874 414 aaKnown RBP17■□□□□ 0.31
SF3A2-205ENST00000590034 SYN1P17600 705 aa17■□□□□ 0.31
SF3A2-205ENST00000590034 MAPK4P31152 587 aa17■□□□□ 0.31
SF3A2-205ENST00000590034 CACNB2Q08289 660 aaPredicted RBP17■□□□□ 0.31
SF3A2-205ENST00000590034 MORN1Q5T089 497 aa17■□□□□ 0.31
SF3A2-205ENST00000590034 TATDN1Q6P1N9 297 aa17■□□□□ 0.31
SF3A2-205ENST00000590034 GPR142Q7Z601 462 aa17■□□□□ 0.31
SF3A2-205ENST00000590034 ZKSCAN1P17029 563 aaPredicted RBP16.99■□□□□ 0.31
SF3A2-205ENST00000590034 CCND3P30281 292 aaPredicted RBP16.99■□□□□ 0.31
SF3A2-205ENST00000590034 BMP8BP34820 402 aa16.99■□□□□ 0.31
SF3A2-205ENST00000590034 ZYXQ15942 572 aaKnown RBP16.99■□□□□ 0.31
SF3A2-205ENST00000590034 USP17L2Q6R6M4 530 aa16.99■□□□□ 0.31
SF3A2-205ENST00000590034 MAGEB6Q8N7X4 407 aa16.99■□□□□ 0.31
SF3A2-205ENST00000590034 C12orf42Q96LP6 360 aa16.99■□□□□ 0.31
SF3A2-205ENST00000590034 COL6A1P12109 1028 aa16.98■□□□□ 0.31
SF3A2-205ENST00000590034 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
SF3A2-205ENST00000590034 LHX8Q68G74 356 aa16.98■□□□□ 0.31
SF3A2-205ENST00000590034 ITPRIPQ8IWB1 547 aa16.98■□□□□ 0.31
SF3A2-205ENST00000590034 EHD4Q9H223 541 aa16.98■□□□□ 0.31
SF3A2-205ENST00000590034 SERPINB13Q9UIV8 391 aa16.98■□□□□ 0.31
SF3A2-205ENST00000590034 DNAH12Q6ZR08 3092 aa16.98■□□□□ 0.31
SF3A2-205ENST00000590034 RGS2P41220 211 aa16.97■□□□□ 0.31
SF3A2-205ENST00000590034 MAGEA10P43363 369 aaPredicted RBP16.97■□□□□ 0.31
SF3A2-205ENST00000590034 USP5P45974 858 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms