RNA–Protein interactions for RNA: ENST00000589420.1

ZNF397-206, Transcript of zinc finger protein 397, humanhuman

TSL 1 (best)

Gene ZNF397, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-206ENST00000589420 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
ZNF397-206ENST00000589420 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
ZNF397-206ENST00000589420 MIER1Q8N108 512 aa13.44□□□□□ -0.26
ZNF397-206ENST00000589420 DPF3Q92784 378 aa13.44□□□□□ -0.26
ZNF397-206ENST00000589420 HTATIP2Q9BUP3 242 aa13.44□□□□□ -0.26
ZNF397-206ENST00000589420 CCDC8Q9H0W5 538 aaPredicted RBP13.44□□□□□ -0.26
ZNF397-206ENST00000589420 DNAJC18Q9H819 358 aa13.44□□□□□ -0.26
ZNF397-206ENST00000589420 TLR7Q9NYK1 1049 aaKnown RBP13.44□□□□□ -0.26
ZNF397-206ENST00000589420 TMOD4Q9NZQ9 345 aa13.44□□□□□ -0.26
ZNF397-206ENST00000589420 PALD1Q9ULE6 856 aa13.44□□□□□ -0.26
ZNF397-206ENST00000589420 LOC285556D6RIA3 1793 aa13.44□□□□□ -0.26
ZNF397-206ENST00000589420 C19orf81C9J6K1 198 aa13.43□□□□□ -0.26
ZNF397-206ENST00000589420 IDH1O75874 414 aaKnown RBP13.43□□□□□ -0.26
ZNF397-206ENST00000589420 FARP2O94887 1054 aaPredicted RBP13.43□□□□□ -0.26
ZNF397-206ENST00000589420 HOXA7P31268 230 aaPredicted RBP13.43□□□□□ -0.26
ZNF397-206ENST00000589420 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
ZNF397-206ENST00000589420 MORF4L1Q9UBU8 362 aa13.43□□□□□ -0.26
ZNF397-206ENST00000589420 TAOK2Q9UL54 1235 aa13.43□□□□□ -0.26
ZNF397-206ENST00000589420 COLQQ9Y215 455 aaPredicted RBP13.43□□□□□ -0.26
ZNF397-206ENST00000589420 ZBED9Q6R2W3 1325 aa13.42□□□□□ -0.26
ZNF397-206ENST00000589420 ATAD5Q96QE3 1844 aa13.42□□□□□ -0.26
ZNF397-206ENST00000589420 DYNLL1P63167 89 aaKnown RBP13.42□□□□□ -0.26
ZNF397-206ENST00000589420 JAG1P78504 1218 aa13.42□□□□□ -0.26
ZNF397-206ENST00000589420 MAP3K12Q12852 859 aa13.42□□□□□ -0.26
ZNF397-206ENST00000589420 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
ZNF397-206ENST00000589420 PAK6Q9NQU5 681 aaPredicted RBP13.42□□□□□ -0.26
ZNF397-206ENST00000589420 SAP30BPQ9UHR5 308 aaKnown RBP13.42□□□□□ -0.26
ZNF397-206ENST00000589420 ZBTB21Q9ULJ3 1066 aa13.42□□□□□ -0.26
ZNF397-206ENST00000589420 TRIOBPQ9H2D6 2365 aa13.42□□□□□ -0.26
ZNF397-206ENST00000589420 SIPA1L1O43166 1804 aa13.41□□□□□ -0.26
ZNF397-206ENST00000589420 USP17L10C9JJH3 530 aa13.41□□□□□ -0.26
ZNF397-206ENST00000589420 TFRCP02786 760 aaKnown RBP13.41□□□□□ -0.26
ZNF397-206ENST00000589420 MS4A1P11836 297 aa13.41□□□□□ -0.26
ZNF397-206ENST00000589420 FXR1P51114 621 aaKnown RBP eCLIP13.41□□□□□ -0.26
ZNF397-206ENST00000589420 AACSQ86V21 672 aa13.41□□□□□ -0.26
ZNF397-206ENST00000589420 MAGEB6Q8N7X4 407 aa13.41□□□□□ -0.26
ZNF397-206ENST00000589420 MIGA1Q8NAN2 632 aa13.41□□□□□ -0.26
ZNF397-206ENST00000589420 DEFB118Q96PH6 123 aa13.41□□□□□ -0.26
ZNF397-206ENST00000589420 GJD2Q9UKL4 321 aa13.41□□□□□ -0.26
ZNF397-206ENST00000589420 NR2E3Q9Y5X4 410 aa13.41□□□□□ -0.26
ZNF397-206ENST00000589420 GDF11O95390 407 aa13.4□□□□□ -0.26
ZNF397-206ENST00000589420 HMGCRP04035 888 aa13.4□□□□□ -0.26
ZNF397-206ENST00000589420 USP5P45974 858 aa13.4□□□□□ -0.26
ZNF397-206ENST00000589420 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
ZNF397-206ENST00000589420 GPRC5AQ8NFJ5 357 aa13.4□□□□□ -0.26
ZNF397-206ENST00000589420 PANK1Q8TE04 598 aa13.4□□□□□ -0.26
ZNF397-206ENST00000589420 GTF3C2Q8WUA4 911 aaPredicted RBP13.4□□□□□ -0.26
ZNF397-206ENST00000589420 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
ZNF397-206ENST00000589420 CRISPLD2Q9H0B8 497 aa13.4□□□□□ -0.26
ZNF397-206ENST00000589420 EHD4Q9H223 541 aa13.4□□□□□ -0.26
ZNF397-206ENST00000589420 EXOC6BQ9Y2D4 811 aa13.4□□□□□ -0.26
ZNF397-206ENST00000589420 FOCADQ5VW36 1801 aa13.4□□□□□ -0.26
ZNF397-206ENST00000589420 DOCK3Q8IZD9 2030 aa13.39□□□□□ -0.27
ZNF397-206ENST00000589420 HERVK_113P62684 666 aa13.39□□□□□ -0.27
ZNF397-206ENST00000589420 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
ZNF397-206ENST00000589420 TATDN1Q6P1N9 297 aa13.39□□□□□ -0.27
ZNF397-206ENST00000589420 USP17L2Q6R6M4 530 aa13.39□□□□□ -0.27
ZNF397-206ENST00000589420 TTC6Q86TZ1 520 aa13.39□□□□□ -0.27
ZNF397-206ENST00000589420 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.39□□□□□ -0.27
ZNF397-206ENST00000589420 ANTXR1Q9H6X2 564 aa13.39□□□□□ -0.27
ZNF397-206ENST00000589420 SERPINB13Q9UIV8 391 aa13.39□□□□□ -0.27
ZNF397-206ENST00000589420 CDK5RAP2Q96SN8 1893 aa13.39□□□□□ -0.27
ZNF397-206ENST00000589420 MYO5AQ9Y4I1 1855 aaKnown RBP13.38□□□□□ -0.27
ZNF397-206ENST00000589420 GH2P01242 217 aa13.38□□□□□ -0.27
ZNF397-206ENST00000589420 TTF1Q15361 905 aaPredicted RBP13.38□□□□□ -0.27
ZNF397-206ENST00000589420 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
ZNF397-206ENST00000589420 RHPN1Q8TCX5 695 aa13.38□□□□□ -0.27
ZNF397-206ENST00000589420 SOCS4Q8WXH5 440 aa13.38□□□□□ -0.27
ZNF397-206ENST00000589420 TXNRD2Q9NNW7 524 aa13.38□□□□□ -0.27
ZNF397-206ENST00000589420 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
ZNF397-206ENST00000589420 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
ZNF397-206ENST00000589420 RPTORQ8N122 1335 aa13.38□□□□□ -0.27
ZNF397-206ENST00000589420 HMMRO75330 724 aa13.37□□□□□ -0.27
ZNF397-206ENST00000589420 XRCC5P13010 732 aaKnown RBP13.37□□□□□ -0.27
ZNF397-206ENST00000589420 MAPK4P31152 587 aa13.37□□□□□ -0.27
ZNF397-206ENST00000589420 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
ZNF397-206ENST00000589420 RPAP2Q8IXW5 612 aaPredicted RBP13.37□□□□□ -0.27
ZNF397-206ENST00000589420 CLASRPQ8N2M8 674 aaKnown RBP13.37□□□□□ -0.27
ZNF397-206ENST00000589420 ANKLE1Q8NAG6 615 aa13.37□□□□□ -0.27
ZNF397-206ENST00000589420 C12orf42Q96LP6 360 aa13.37□□□□□ -0.27
ZNF397-206ENST00000589420 FEZ1Q99689 392 aa13.37□□□□□ -0.27
ZNF397-206ENST00000589420 NUDT12Q9BQG2 462 aa13.37□□□□□ -0.27
ZNF397-206ENST00000589420 RIOK1Q9BRS2 568 aaKnown RBP13.37□□□□□ -0.27
ZNF397-206ENST00000589420 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
ZNF397-206ENST00000589420 IL1RAPL2Q9NP60 686 aa13.37□□□□□ -0.27
ZNF397-206ENST00000589420 RBPJLQ9UBG7 517 aa13.37□□□□□ -0.27
ZNF397-206ENST00000589420 MAGEB6P1A0A0J9YX57 407 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 EVI5O60447 810 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 CYP2B6P20813 491 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 USP14P54578 494 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 ERVK-9P63128 1117 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 ERVK-24P63145 666 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 PDE3AQ14432 1141 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 ABCB5Q2M3G0 1257 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 CERKLQ49MI3 558 aaPredicted RBP13.36□□□□□ -0.27
ZNF397-206ENST00000589420 NECAB2Q7Z6G3 386 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 TRMT44Q8IYL2 757 aaKnown RBP13.36□□□□□ -0.27
ZNF397-206ENST00000589420 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.36□□□□□ -0.27
ZNF397-206ENST00000589420 KIF1BPQ96EK5 621 aa13.36□□□□□ -0.27
ZNF397-206ENST00000589420 PAWRQ96IZ0 340 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms