RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 C17orf99Q6UX52 265 aa18.36■□□□□ 0.53
ERCC1-209ENST00000589214 TTC6Q86TZ1 520 aa18.36■□□□□ 0.53
ERCC1-209ENST00000589214 LNPKQ9C0E8 428 aa18.36■□□□□ 0.53
ERCC1-209ENST00000589214 EHD4Q9H223 541 aa18.36■□□□□ 0.53
ERCC1-209ENST00000589214 SERPINB13Q9UIV8 391 aa18.36■□□□□ 0.53
ERCC1-209ENST00000589214 AGTPBP1Q9UPW5 1226 aa18.36■□□□□ 0.53
ERCC1-209ENST00000589214 POLR3DP05423 398 aaPredicted RBP18.35■□□□□ 0.53
ERCC1-209ENST00000589214 ARHGEF6Q15052 776 aa18.35■□□□□ 0.53
ERCC1-209ENST00000589214 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
ERCC1-209ENST00000589214 MCM9Q9NXL9 1143 aa18.35■□□□□ 0.53
ERCC1-209ENST00000589214 SLC45A1Q9Y2W3 748 aa18.35■□□□□ 0.53
ERCC1-209ENST00000589214 TTC41PQ6P2S7 1318 aa18.34■□□□□ 0.53
ERCC1-209ENST00000589214 BAZ2AQ9UIF9 1905 aaKnown RBP18.34■□□□□ 0.53
ERCC1-209ENST00000589214 PRKAB2O43741 272 aa18.34■□□□□ 0.53
ERCC1-209ENST00000589214 MX1P20591 662 aa18.34■□□□□ 0.53
ERCC1-209ENST00000589214 PLCD1P51178 756 aa18.34■□□□□ 0.53
ERCC1-209ENST00000589214 EVX2Q03828 476 aa18.34■□□□□ 0.53
ERCC1-209ENST00000589214 MTMR2Q13614 643 aa18.34■□□□□ 0.53
ERCC1-209ENST00000589214 UBE3CQ15386 1083 aa18.34■□□□□ 0.53
ERCC1-209ENST00000589214 ZSCAN25Q6NSZ9 544 aa18.34■□□□□ 0.53
ERCC1-209ENST00000589214 PROCA1Q8NCQ7 364 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-209ENST00000589214 PI4K2BQ8TCG2 481 aa18.34■□□□□ 0.53
ERCC1-209ENST00000589214 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-209ENST00000589214 DCP1AQ9NPI6 582 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-209ENST00000589214 SALL3Q9BXA9 1300 aa18.33■□□□□ 0.53
ERCC1-209ENST00000589214 GH2P01242 217 aa18.33■□□□□ 0.52
ERCC1-209ENST00000589214 BCRP11274 1271 aa18.33■□□□□ 0.52
ERCC1-209ENST00000589214 WDR18Q9BV38 432 aa18.33■□□□□ 0.52
ERCC1-209ENST00000589214 PTCH2Q9Y6C5 1203 aa18.33■□□□□ 0.52
ERCC1-209ENST00000589214 ERC2O15083 957 aa18.32■□□□□ 0.52
ERCC1-209ENST00000589214 CYP2D6P10635 497 aa18.32■□□□□ 0.52
ERCC1-209ENST00000589214 CTGFP29279 349 aa18.32■□□□□ 0.52
ERCC1-209ENST00000589214 TATDN1Q6P1N9 297 aa18.32■□□□□ 0.52
ERCC1-209ENST00000589214 KBTBD3Q8NAB2 608 aa18.32■□□□□ 0.52
ERCC1-209ENST00000589214 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
ERCC1-209ENST00000589214 PNMA3Q9UL41 463 aa18.32■□□□□ 0.52
ERCC1-209ENST00000589214 MGAMO43451 1857 aa18.32■□□□□ 0.52
ERCC1-209ENST00000589214 MYH8P13535 1937 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
ERCC1-209ENST00000589214 SHMT1P34896 483 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 PSMC4P43686 418 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 RGS19P49795 217 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 BACE1P56817 501 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 NUCB1Q02818 461 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 MLLT1Q03111 559 aaPredicted RBP18.31■□□□□ 0.52
ERCC1-209ENST00000589214 SH3D19Q5HYK7 790 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 CHD1LQ86WJ1 897 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 TRIM47Q96LD4 638 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 PUS7LQ9H0K6 701 aaKnown RBP18.31■□□□□ 0.52
ERCC1-209ENST00000589214 TMOD4Q9NZQ9 345 aa18.31■□□□□ 0.52
ERCC1-209ENST00000589214 FMNL1O95466 1100 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-209ENST00000589214 PDE1AP54750 535 aa18.3■□□□□ 0.52
ERCC1-209ENST00000589214 GABPAQ06546 454 aa18.3■□□□□ 0.52
ERCC1-209ENST00000589214 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■□□ 15.1
ERCC1-209ENST00000589214 RAB3GAP1Q15042 981 aa18.3■□□□□ 0.52
ERCC1-209ENST00000589214 ABCB5Q2M3G0 1257 aa18.3■□□□□ 0.52
ERCC1-209ENST00000589214 CERKLQ49MI3 558 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-209ENST00000589214 SLC44A5Q8NCS7 719 aa18.3■□□□□ 0.52
ERCC1-209ENST00000589214 FEZ1Q99689 392 aa18.3■□□□□ 0.52
ERCC1-209ENST00000589214 SLC4A4Q9Y6R1 1079 aa18.3■□□□□ 0.52
ERCC1-209ENST00000589214 USP17L10C9JJH3 530 aa18.29■□□□□ 0.52
ERCC1-209ENST00000589214 OSBPP22059 807 aa18.29■□□□□ 0.52
ERCC1-209ENST00000589214 ZYXQ15942 572 aaKnown RBP18.29■□□□□ 0.52
ERCC1-209ENST00000589214 SLC9C1Q4G0N8 1177 aa18.29■□□□□ 0.52
ERCC1-209ENST00000589214 ATP8A2Q9NTI2 1148 aa18.29■□□□□ 0.52
ERCC1-209ENST00000589214 STAP2Q9UGK3 403 aa18.29■□□□□ 0.52
ERCC1-209ENST00000589214 MYPNQ86TC9 1320 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 RBBP6Q7Z6E9 1792 aaKnown RBP18.28■□□□□ 0.52
ERCC1-209ENST00000589214 CYP2D7A0A087X1C5 515 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 GNRH1P01148 92 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 FCGRTP55899 365 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 AMOTL1Q8IY63 956 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 ANKRD13CQ8N6S4 541 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 APPBP2Q92624 585 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 ARMC5Q96C12 935 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 DYNLL2Q96FJ2 89 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 DDRGK1Q96HY6 314 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 ASCC2Q9H1I8 757 aaPredicted RBP18.28■□□□□ 0.52
ERCC1-209ENST00000589214 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
ERCC1-209ENST00000589214 C19orf81C9J6K1 198 aa18.27■□□□□ 0.52
ERCC1-209ENST00000589214 MPHOSPH10O00566 681 aaKnown RBP18.27■□□□□ 0.52
ERCC1-209ENST00000589214 RNF113AO15541 343 aaKnown RBP18.27■□□□□ 0.52
ERCC1-209ENST00000589214 PRMT2P55345 433 aa18.27■□□□□ 0.52
ERCC1-209ENST00000589214 IRX3P78415 501 aaPredicted RBP18.27■□□□□ 0.52
ERCC1-209ENST00000589214 OSBP2Q969R2 916 aa18.27■□□□□ 0.52
ERCC1-209ENST00000589214 FSD1Q9BTV5 496 aa18.27■□□□□ 0.52
ERCC1-209ENST00000589214 SRRDQ9UH36 339 aa18.27■□□□□ 0.52
ERCC1-209ENST00000589214 HTTP42858 3142 aa18.27■□□□□ 0.51
ERCC1-209ENST00000589214 USP17L12C9JPN9 530 aa18.26■□□□□ 0.51
ERCC1-209ENST00000589214 USP17L21D6R901 530 aa18.26■□□□□ 0.51
ERCC1-209ENST00000589214 SMIM22K7EJ46 135 aa18.26■□□□□ 0.51
ERCC1-209ENST00000589214 ZFYP08048 801 aaPredicted RBP18.26■□□□□ 0.51
ERCC1-209ENST00000589214 HOXD10P28358 340 aa18.26■□□□□ 0.51
ERCC1-209ENST00000589214 PRKCZQ05513 592 aa18.26■□□□□ 0.51
ERCC1-209ENST00000589214 FAM110CQ1W6H9 321 aa18.26■□□□□ 0.51
ERCC1-209ENST00000589214 USP17L2Q6R6M4 530 aa18.26■□□□□ 0.51
ERCC1-209ENST00000589214 SH3TC2Q8TF17 1288 aa18.26■□□□□ 0.51
ERCC1-209ENST00000589214 SWAP70Q9UH65 585 aa18.26■□□□□ 0.51
ERCC1-209ENST00000589214 M0R2C6 588 aa18.25■□□□□ 0.51
ERCC1-209ENST00000589214 MYCP01106 439 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms