RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 PARD3Q8TEW0 1356 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 NDUFB5O43674 189 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 SARM1Q6SZW1 724 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 RAB11FIP4Q86YS3 637 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 ERMNQ8TAM6 284 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 MORC4Q8TE76 937 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 CASP10Q92851 521 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 HIC2Q96JB3 615 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 IFT74Q96LB3 600 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 NRDE2Q9H7Z3 1164 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 PFDN4Q9NQP4 134 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 CDC23Q9UJX2 597 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 TMCO1Q9UM00 188 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 CPLX1O14810 134 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 CFAP157Q5JU67 520 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 ZBTB8BQ8NAP8 495 aaPredicted RBP8.67□□□□□ -1.02
LAMA3-210ENST00000588770 EPSTI1Q96J88 318 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 AGAP3Q96P47 875 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 SLC39A3Q9BRY0 314 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.67□□□□□ -1.02
LAMA3-210ENST00000588770 BRD8Q9H0E9 1235 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 LZTFL1Q9NQ48 299 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 ZNF148Q9UQR1 794 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 PPP2R2CQ9Y2T4 447 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 SH3GLB1Q9Y371 365 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 AK9Q5TCS8 1911 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 USO1O60763 962 aaKnown RBP8.67□□□□□ -1.02
LAMA3-210ENST00000588770 NUGGCQ68CJ6 796 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 CPLX3Q8WVH0 158 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 SEPT8Q92599 483 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 SIKE1Q9BRV8 207 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 SUGCTQ9HAC7 445 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 MTUS1Q9ULD2 1270 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 KIF21AQ7Z4S6 1674 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 CDHR2Q9BYE9 1310 aa8.67□□□□□ -1.02
LAMA3-210ENST00000588770 KIF11P52732 1056 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 MYBPC3Q14896 1274 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 MUM1Q2TAK8 710 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 PPP1R15BQ5SWA1 713 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 STAG2Q8N3U4 1231 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 N6AMT1Q9Y5N5 214 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 PARP3Q9Y6F1 533 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 CCDC160A6NGH7 325 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 H7C1W4 665 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 GJB2P29033 226 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 SEPT2Q15019 361 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 ACCSLQ4AC99 568 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 TMEM154Q6P9G4 183 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 CACNA2D4Q7Z3S7 1137 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 SIX5Q8N196 739 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 SIL1Q9H173 461 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 SYNCQ9H7C4 482 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 LARSQ9P2J5 1176 aaKnown RBP8.66□□□□□ -1.02
LAMA3-210ENST00000588770 RASAL2Q9UJF2 1139 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 IKBKGQ9Y6K9 419 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 ATXN2Q99700 1313 aaKnown RBP8.66□□□□□ -1.02
LAMA3-210ENST00000588770 TACC1O75410 805 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 ATP6V1G2O95670 118 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 CKAP4Q07065 602 aaKnown RBP8.66□□□□□ -1.02
LAMA3-210ENST00000588770 NCCRP1Q6ZVX7 275 aaPredicted RBP8.66□□□□□ -1.02
LAMA3-210ENST00000588770 MAATS1Q7Z4T9 603 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 FCHSD1Q86WN1 690 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 BARX2Q9UMQ3 279 aaPredicted RBP8.66□□□□□ -1.02
LAMA3-210ENST00000588770 MAPK8IP1Q9UQF2 711 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 VDRP11473 427 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 PSMA5P28066 241 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 TMED10P49755 219 aaKnown RBP8.66□□□□□ -1.02
LAMA3-210ENST00000588770 SND1Q7KZF4 910 aaKnown RBP eCLIP8.66□□□□□ -1.02
LAMA3-210ENST00000588770 NDNQ99608 321 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 RTEL1Q9NZ71 1219 aa8.66□□□□□ -1.02
LAMA3-210ENST00000588770 SLC26A4O43511 780 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 MMEP08473 750 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 UBASH3AP57075 661 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 CCDC174Q6PII3 467 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 TTLL7Q6ZT98 887 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 YTHDF3Q7Z739 585 aaKnown RBP8.65□□□□□ -1.02
LAMA3-210ENST00000588770 TBC1D1Q86TI0 1168 aaPredicted RBP8.65□□□□□ -1.02
LAMA3-210ENST00000588770 WDR60Q8WVS4 1066 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 PREBQ9HCU5 417 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.02
LAMA3-210ENST00000588770 GCOM1H8Y6P7 765 aaPredicted RBP8.65□□□□□ -1.02
LAMA3-210ENST00000588770 KRT14P02533 472 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 MYZAPP0CAP1 466 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 PDE6CP51160 858 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 CFAP58Q5T655 872 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 PI16Q6UXB8 463 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 ZNF473Q8WTR7 871 aaKnown RBP8.65□□□□□ -1.02
LAMA3-210ENST00000588770 HVCN1Q96D96 273 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 UHRF1BP1LA0JNW5 1464 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 VSNL1P62760 191 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 BLMHQ13867 455 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 PHLDB2Q86SQ0 1253 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 P3H4Q92791 437 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 CTAGE1Q96RT6 745 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 CORO1BQ9BR76 489 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 CENPOQ9BU64 300 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 CEP131Q9UPN4 1083 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 STK38LQ9Y2H1 464 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 TMED5Q9Y3A6 229 aa8.65□□□□□ -1.02
LAMA3-210ENST00000588770 TRIM43BA6NCK2 446 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms