RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 ARHGAP39Q9C0H5 1083 aa10.67□□□□□ -0.7
SDF2-207ENST00000588472 AS3MTQ9HBK9 375 aa10.67□□□□□ -0.7
SDF2-207ENST00000588472 ZCCHC17Q9NP64 241 aaKnown RBP10.67□□□□□ -0.7
SDF2-207ENST00000588472 SERPINB13Q9UIV8 391 aa10.67□□□□□ -0.7
SDF2-207ENST00000588472 SLC4A4Q9Y6R1 1079 aa10.67□□□□□ -0.7
SDF2-207ENST00000588472 LAMB1P07942 1786 aa10.67□□□□□ -0.7
SDF2-207ENST00000588472 HTTP42858 3142 aa10.67□□□□□ -0.7
SDF2-207ENST00000588472 MYH1P12882 1939 aa10.66□□□□□ -0.7
SDF2-207ENST00000588472 CYP2D7A0A087X1C5 515 aa10.66□□□□□ -0.7
SDF2-207ENST00000588472 MPHOSPH10O00566 681 aaKnown RBP10.66□□□□□ -0.7
SDF2-207ENST00000588472 FMNL1O95466 1100 aaPredicted RBP10.66□□□□□ -0.7
SDF2-207ENST00000588472 MYCP01106 439 aaPredicted RBP10.66□□□□□ -0.7
SDF2-207ENST00000588472 MTMR2Q13614 643 aa10.66□□□□□ -0.7
SDF2-207ENST00000588472 ARHGEF6Q15052 776 aa10.66□□□□□ -0.7
SDF2-207ENST00000588472 ZYXQ15942 572 aaKnown RBP10.66□□□□□ -0.7
SDF2-207ENST00000588472 C17orf99Q6UX52 265 aa10.66□□□□□ -0.7
SDF2-207ENST00000588472 SMCR8Q8TEV9 937 aaPredicted RBP10.66□□□□□ -0.7
SDF2-207ENST00000588472 PUS7LQ9H0K6 701 aaKnown RBP10.66□□□□□ -0.7
SDF2-207ENST00000588472 RNF39Q9H2S5 420 aa10.66□□□□□ -0.7
SDF2-207ENST00000588472 DCP1AQ9NPI6 582 aaPredicted RBP10.66□□□□□ -0.7
SDF2-207ENST00000588472 ZBTB21Q9ULJ3 1066 aa10.66□□□□□ -0.7
SDF2-207ENST00000588472 PTPN22Q9Y2R2 807 aa10.66□□□□□ -0.7
SDF2-207ENST00000588472 SIPA1L1O43166 1804 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 FOCADQ5VW36 1801 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 ERC2O15083 957 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 MX1P20591 662 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 PSMC4P43686 418 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 FXR1P51114 621 aaKnown RBP eCLIP10.65□□□□□ -0.7
SDF2-207ENST00000588472 LACTBP83111 547 aaPredicted RBP10.65□□□□□ -0.7
SDF2-207ENST00000588472 HDAC1Q13547 482 aaPredicted RBP10.65□□□□□ -0.7
SDF2-207ENST00000588472 UBE3CQ15386 1083 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 ABCB5Q2M3G0 1257 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 METTL16Q86W50 562 aaKnown RBP10.65□□□□□ -0.7
SDF2-207ENST00000588472 STK11IPQ8N1F8 1099 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 KBTBD3Q8NAB2 608 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 SLC44A5Q8NCS7 719 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 DYNLL2Q96FJ2 89 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 DDRGK1Q96HY6 314 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 LNPKQ9C0E8 428 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 RWDD1Q9H446 243 aaPredicted RBP10.65□□□□□ -0.7
SDF2-207ENST00000588472 CABP5Q9NP86 173 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 TMOD4Q9NZQ9 345 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 AGTPBP1Q9UPW5 1226 aa10.65□□□□□ -0.7
SDF2-207ENST00000588472 ATAD5Q96QE3 1844 aa10.65□□□□□ -0.71
SDF2-207ENST00000588472 TTC41PQ6P2S7 1318 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 PHIPQ8WWQ0 1821 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 USP17L12C9JPN9 530 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 USP17L21D6R901 530 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 SMIM22K7EJ46 135 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 RNF113AO15541 343 aaKnown RBP10.64□□□□□ -0.71
SDF2-207ENST00000588472 GLRX3O76003 335 aaKnown RBP10.64□□□□□ -0.71
SDF2-207ENST00000588472 IGHDP01880 384 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 APPP05067 770 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 OSBPP22059 807 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 SHMT1P34896 483 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 BACE1P56817 501 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 TATDN1Q6P1N9 297 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 AMOTL1Q8IY63 956 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 PI4K2BQ8TCG2 481 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 FEZ1Q99689 392 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 FSD1Q9BTV5 496 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 WDR18Q9BV38 432 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 TBC1D2Q9BYX2 928 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 EHD4Q9H223 541 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 ATP8A2Q9NTI2 1148 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 NAV1Q8NEY1 1877 aa10.64□□□□□ -0.71
SDF2-207ENST00000588472 MINDY4BA8MYZ0 360 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 USP17L10C9JJH3 530 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 M0R2C6 588 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 EN2P19622 333 aaPredicted RBP10.63□□□□□ -0.71
SDF2-207ENST00000588472 CTGFP29279 349 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 PABPC4Q13310 644 aaKnown RBP eCLIP10.63□□□□□ -0.715e-6■□□□□ 10.8
SDF2-207ENST00000588472 ANKRD13CQ8N6S4 541 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 PROCA1Q8NCQ7 364 aaPredicted RBP10.63□□□□□ -0.71
SDF2-207ENST00000588472 ACER1Q8TDN7 264 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 APPBP2Q92624 585 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 OSBP2Q969R2 916 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 TRIM47Q96LD4 638 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 STRBPQ96SI9 672 aaKnown RBP10.63□□□□□ -0.71
SDF2-207ENST00000588472 TMEM106CQ9BVX2 250 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 PNMA3Q9UL41 463 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 PTCH2Q9Y6C5 1203 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 ZSWIM8A7E2V4 1837 aa10.63□□□□□ -0.71
SDF2-207ENST00000588472 ADGRA2Q96PE1 1338 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 ZFYP08048 801 aaPredicted RBP10.62□□□□□ -0.71
SDF2-207ENST00000588472 BCRP11274 1271 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 IRX3P78415 501 aaPredicted RBP10.62□□□□□ -0.71
SDF2-207ENST00000588472 AAMPQ13685 434 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 SEPT2Q15019 361 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 LRRFIP1Q32MZ4 808 aaKnown RBP10.62□□□□□ -0.71
SDF2-207ENST00000588472 SLC9C1Q4G0N8 1177 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 C12orf60Q5U649 245 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 USP17L2Q6R6M4 530 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 SH3TC2Q8TF17 1288 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 ARMC5Q96C12 935 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 SEC62Q99442 399 aaKnown RBP10.62□□□□□ -0.71
SDF2-207ENST00000588472 ASCC2Q9H1I8 757 aaPredicted RBP10.62□□□□□ -0.71
SDF2-207ENST00000588472 GINM1Q9NU53 330 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
SDF2-207ENST00000588472 SLC45A1Q9Y2W3 748 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms