RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 MTMR2Q13614 643 aa23.58■■□□□ 1.37
TPM4-208ENST00000588410 SLFNL1Q499Z3 407 aa23.58■■□□□ 1.37
TPM4-208ENST00000588410 CERKLQ49MI3 558 aaPredicted RBP23.58■■□□□ 1.37
TPM4-208ENST00000588410 SH3D19Q5HYK7 790 aa23.58■■□□□ 1.37
TPM4-208ENST00000588410 TSHZ3Q63HK5 1081 aa23.58■■□□□ 1.37
TPM4-208ENST00000588410 TATDN1Q6P1N9 297 aa23.58■■□□□ 1.37
TPM4-208ENST00000588410 DDRGK1Q96HY6 314 aa23.58■■□□□ 1.37
TPM4-208ENST00000588410 DCP1AQ9NPI6 582 aaPredicted RBP23.58■■□□□ 1.37
TPM4-208ENST00000588410 PTCH2Q9Y6C5 1203 aa23.58■■□□□ 1.37
TPM4-208ENST00000588410 DOCK1Q14185 1865 aa23.58■■□□□ 1.36
TPM4-208ENST00000588410 C19orf81C9J6K1 198 aa23.57■■□□□ 1.36
TPM4-208ENST00000588410 BACE1P56817 501 aa23.57■■□□□ 1.36
TPM4-208ENST00000588410 NBPF11Q86T75 865 aa23.57■■□□□ 1.36
TPM4-208ENST00000588410 CABP5Q9NP86 173 aa23.57■■□□□ 1.36
TPM4-208ENST00000588410 ATP8A2Q9NTI2 1148 aa23.57■■□□□ 1.36
TPM4-208ENST00000588410 USP17L10C9JJH3 530 aa23.56■■□□□ 1.36
TPM4-208ENST00000588410 ERC2O15083 957 aa23.56■■□□□ 1.36
TPM4-208ENST00000588410 FCGRTP55899 365 aa23.56■■□□□ 1.36
TPM4-208ENST00000588410 ABCB5Q2M3G0 1257 aa23.56■■□□□ 1.36
TPM4-208ENST00000588410 SHROOM1Q2M3G4 852 aaPredicted RBP23.56■■□□□ 1.36
TPM4-208ENST00000588410 SLC9C1Q4G0N8 1177 aa23.56■■□□□ 1.36
TPM4-208ENST00000588410 AMOTL1Q8IY63 956 aa23.56■■□□□ 1.36
TPM4-208ENST00000588410 TRIM47Q96LD4 638 aa23.56■■□□□ 1.36
TPM4-208ENST00000588410 TTC41PQ6P2S7 1318 aa23.56■■□□□ 1.36
TPM4-208ENST00000588410 PRKAB2O43741 272 aa23.55■■□□□ 1.36
TPM4-208ENST00000588410 AAMPQ13685 434 aa23.55■■□□□ 1.36
TPM4-208ENST00000588410 RAB3GAP1Q15042 981 aa23.55■■□□□ 1.36
TPM4-208ENST00000588410 KBTBD3Q8NAB2 608 aa23.55■■□□□ 1.36
TPM4-208ENST00000588410 ARMC5Q96C12 935 aa23.55■■□□□ 1.36
TPM4-208ENST00000588410 CHGBP05060 677 aa23.54■■□□□ 1.36
TPM4-208ENST00000588410 LRRFIP1Q32MZ4 808 aaKnown RBP23.54■■□□□ 1.36
TPM4-208ENST00000588410 FEZ1Q99689 392 aa23.54■■□□□ 1.36
TPM4-208ENST00000588410 SRRDQ9UH36 339 aa23.54■■□□□ 1.36
TPM4-208ENST00000588410 SLC4A4Q9Y6R1 1079 aa23.54■■□□□ 1.36
TPM4-208ENST00000588410 MYO5AQ9Y4I1 1855 aaKnown RBP23.53■■□□□ 1.36
TPM4-208ENST00000588410 CTGFP29279 349 aa23.53■■□□□ 1.36
TPM4-208ENST00000588410 SHMT1P34896 483 aa23.53■■□□□ 1.36
TPM4-208ENST00000588410 IRX3P78415 501 aaPredicted RBP23.53■■□□□ 1.36
TPM4-208ENST00000588410 ANKRD45Q5TZF3 282 aa23.53■■□□□ 1.36
TPM4-208ENST00000588410 ANKRD13CQ8N6S4 541 aa23.53■■□□□ 1.36
TPM4-208ENST00000588410 GCC1Q96CN9 775 aa23.53■■□□□ 1.36
TPM4-208ENST00000588410 PUS7LQ9H0K6 701 aaKnown RBP23.53■■□□□ 1.36
TPM4-208ENST00000588410 ASCC2Q9H1I8 757 aaPredicted RBP23.53■■□□□ 1.36
TPM4-208ENST00000588410 MPHOSPH10O00566 681 aaKnown RBP23.52■■□□□ 1.36
TPM4-208ENST00000588410 GLRX3O76003 335 aaKnown RBP23.52■■□□□ 1.36
TPM4-208ENST00000588410 ZFYP08048 801 aaPredicted RBP23.52■■□□□ 1.36
TPM4-208ENST00000588410 CYP2D6P10635 497 aa23.52■■□□□ 1.36
TPM4-208ENST00000588410 GCLCP48506 637 aaPredicted RBP23.52■■□□□ 1.36
TPM4-208ENST00000588410 GABPAQ06546 454 aa23.52■■□□□ 1.36
TPM4-208ENST00000588410 HDAC1Q13547 482 aaPredicted RBP23.52■■□□□ 1.36
TPM4-208ENST00000588410 USP17L2Q6R6M4 530 aa23.52■■□□□ 1.36
TPM4-208ENST00000588410 RAET1EQ8TD07 263 aa23.52■■□□□ 1.36
TPM4-208ENST00000588410 SWAP70Q9UH65 585 aa23.52■■□□□ 1.36
TPM4-208ENST00000588410 MYPNQ86TC9 1320 aa23.52■■□□□ 1.36
TPM4-208ENST00000588410 RNF113AO15541 343 aaKnown RBP23.51■■□□□ 1.35
TPM4-208ENST00000588410 MX1P20591 662 aa23.51■■□□□ 1.35
TPM4-208ENST00000588410 OTUD7AQ8TE49 926 aaPredicted RBP23.51■■□□□ 1.35
TPM4-208ENST00000588410 TMEM106CQ9BVX2 250 aa23.51■■□□□ 1.35
TPM4-208ENST00000588410 TAOK2Q9UL54 1235 aa23.51■■□□□ 1.35
TPM4-208ENST00000588410 TNPO2O14787 897 aaKnown RBP23.5■■□□□ 1.35
TPM4-208ENST00000588410 USP14P54578 494 aa23.5■■□□□ 1.35
TPM4-208ENST00000588410 ZYXQ15942 572 aaKnown RBP23.5■■□□□ 1.35
TPM4-208ENST00000588410 FAM110CQ1W6H9 321 aa23.5■■□□□ 1.35
TPM4-208ENST00000588410 APPBP2Q92624 585 aa23.5■■□□□ 1.35
TPM4-208ENST00000588410 ZNF333Q96JL9 665 aa23.5■■□□□ 1.35
TPM4-208ENST00000588410 SIPA1L1O43166 1804 aa23.49■■□□□ 1.35
TPM4-208ENST00000588410 USP17L12C9JPN9 530 aa23.49■■□□□ 1.35
TPM4-208ENST00000588410 USP17L21D6R901 530 aa23.49■■□□□ 1.35
TPM4-208ENST00000588410 HOXA7P31268 230 aaPredicted RBP23.49■■□□□ 1.35
TPM4-208ENST00000588410 EVX2Q03828 476 aa23.49■■□□□ 1.35
TPM4-208ENST00000588410 SH3TC2Q8TF17 1288 aa23.49■■□□□ 1.35
TPM4-208ENST00000588410 DYNLL2Q96FJ2 89 aa23.49■■□□□ 1.35
TPM4-208ENST00000588410 EMILIN3Q9NT22 766 aa23.49■■□□□ 1.35
TPM4-208ENST00000588410 FOCADQ5VW36 1801 aa23.48■■□□□ 1.35
TPM4-208ENST00000588410 PRKCZQ05513 592 aa23.48■■□□□ 1.35
TPM4-208ENST00000588410 C12orf60Q5U649 245 aa23.48■■□□□ 1.35
TPM4-208ENST00000588410 PI4K2BQ8TCG2 481 aa23.48■■□□□ 1.35
TPM4-208ENST00000588410 STRBPQ96SI9 672 aaKnown RBP23.48■■□□□ 1.35
TPM4-208ENST00000588410 RWDD1Q9H446 243 aaPredicted RBP23.48■■□□□ 1.35
TPM4-208ENST00000588410 MYCP01106 439 aaPredicted RBP23.47■■□□□ 1.35
TPM4-208ENST00000588410 SEPT2Q15019 361 aa23.47■■□□□ 1.35
TPM4-208ENST00000588410 SLC44A5Q8NCS7 719 aa23.47■■□□□ 1.35
TPM4-208ENST00000588410 OSBP2Q969R2 916 aa23.47■■□□□ 1.35
TPM4-208ENST00000588410 COA7Q96BR5 231 aa23.47■■□□□ 1.35
TPM4-208ENST00000588410 P2RX7Q99572 595 aaKnown RBP23.47■■□□□ 1.35
TPM4-208ENST00000588410 FSD1Q9BTV5 496 aa23.47■■□□□ 1.35
TPM4-208ENST00000588410 KIAA1683Q9H0B3 1180 aa23.47■■□□□ 1.35
TPM4-208ENST00000588410 CYP2D7A0A087X1C5 515 aa23.46■■□□□ 1.35
TPM4-208ENST00000588410 GRK4P32298 578 aa23.46■■□□□ 1.35
TPM4-208ENST00000588410 TMEM179Q6ZVK1 233 aa23.46■■□□□ 1.35
TPM4-208ENST00000588410 ACER1Q8TDN7 264 aa23.46■■□□□ 1.35
TPM4-208ENST00000588410 ARPP21Q9UBL0 812 aaPredicted RBP23.46■■□□□ 1.35
TPM4-208ENST00000588410 BIN2Q9UBW5 565 aaPredicted RBP23.46■■□□□ 1.35
TPM4-208ENST00000588410 PHIPQ8WWQ0 1821 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 POTEFA5A3E0 1075 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 GNAT2P19087 354 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 GUCY1A2P33402 732 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 CDK8P49336 464 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 HERVK_113P62684 666 aa23.45■■□□□ 1.34
TPM4-208ENST00000588410 CTR9Q6PD62 1173 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms