RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PCDHGC5Q9Y5F6 944 aa7.77□□□□□ -1.17
TUBD1-208ENST00000588009 PTCH2Q9Y6C5 1203 aa7.77□□□□□ -1.17
TUBD1-208ENST00000588009 RAB11FIP3O75154 756 aa7.76□□□□□ -1.17
TUBD1-208ENST00000588009 TKFCQ3LXA3 575 aa7.76□□□□□ -1.17
TUBD1-208ENST00000588009 CHSY3Q70JA7 882 aa7.76□□□□□ -1.17
TUBD1-208ENST00000588009 DMRTC2Q8IXT2 367 aaPredicted RBP7.76□□□□□ -1.17
TUBD1-208ENST00000588009 GALNT6Q8NCL4 622 aa7.76□□□□□ -1.17
TUBD1-208ENST00000588009 WHAMMQ8TF30 809 aa7.76□□□□□ -1.17
TUBD1-208ENST00000588009 ACSF2Q96CM8 615 aaPredicted RBP7.76□□□□□ -1.17
TUBD1-208ENST00000588009 PCDHB10Q9UN67 800 aa7.76□□□□□ -1.17
TUBD1-208ENST00000588009 SYNGAP1Q96PV0 1343 aa7.76□□□□□ -1.17
TUBD1-208ENST00000588009 FAM86C2PA6NEL3 165 aa7.75□□□□□ -1.17
TUBD1-208ENST00000588009 ADAM11O75078 769 aa7.75□□□□□ -1.17
TUBD1-208ENST00000588009 CD68P34810 354 aaPredicted RBP7.75□□□□□ -1.17
TUBD1-208ENST00000588009 ETF1P62495 437 aaKnown RBP7.75□□□□□ -1.17
TUBD1-208ENST00000588009 TCEA2Q15560 299 aa7.75□□□□□ -1.17
TUBD1-208ENST00000588009 TAF7LQ5H9L4 462 aa7.75□□□□□ -1.17
TUBD1-208ENST00000588009 PPM1JQ5JR12 505 aa7.75□□□□□ -1.17
TUBD1-208ENST00000588009 KIAA1211LQ6NV74 962 aa7.75□□□□□ -1.17
TUBD1-208ENST00000588009 SPATA9Q9BWV2 254 aa7.75□□□□□ -1.17
TUBD1-208ENST00000588009 RAD18Q9NS91 495 aa7.75□□□□□ -1.17
TUBD1-208ENST00000588009 LRRC4BQ9NT99 713 aa7.75□□□□□ -1.17
TUBD1-208ENST00000588009 SUSD5O60279 629 aa7.74□□□□□ -1.17
TUBD1-208ENST00000588009 CELA2BP08218 269 aaPredicted RBP7.74□□□□□ -1.17
TUBD1-208ENST00000588009 FAM153BP0C7A2 387 aa7.74□□□□□ -1.17
TUBD1-208ENST00000588009 ERVK-24P63145 666 aa7.74□□□□□ -1.17
TUBD1-208ENST00000588009 SLC7A5Q01650 507 aa7.74□□□□□ -1.17
TUBD1-208ENST00000588009 FOXD4L6Q3SYB3 417 aaPredicted RBP7.74□□□□□ -1.17
TUBD1-208ENST00000588009 FOXD4L3Q6VB84 417 aaPredicted RBP7.74□□□□□ -1.17
TUBD1-208ENST00000588009 MCATQ8IVS2 390 aaKnown RBP7.74□□□□□ -1.17
TUBD1-208ENST00000588009 SYNPOQ8N3V7 929 aa7.74□□□□□ -1.17
TUBD1-208ENST00000588009 ZSWIM2Q8NEG5 633 aa7.74□□□□□ -1.17
TUBD1-208ENST00000588009 KLHL6Q8WZ60 621 aa7.74□□□□□ -1.17
TUBD1-208ENST00000588009 EPN3Q9H201 632 aa7.74□□□□□ -1.17
TUBD1-208ENST00000588009 KCNK4Q9NYG8 393 aa7.74□□□□□ -1.17
TUBD1-208ENST00000588009 ZNF214Q9UL59 606 aaPredicted RBP7.74□□□□□ -1.17
TUBD1-208ENST00000588009 FANCGO15287 622 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 DEAF1O75398 565 aaPredicted RBP7.73□□□□□ -1.17
TUBD1-208ENST00000588009 ASMTLO95671 621 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 RAG1P15918 1043 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 MASP1P48740 699 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 COL9A3Q14050 684 aaPredicted RBP7.73□□□□□ -1.17
TUBD1-208ENST00000588009 LONRF2Q1L5Z9 754 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 SLC10A6Q3KNW5 377 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 GNPTABQ3T906 1256 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 EXOSC6Q5RKV6 272 aaKnown RBP7.73□□□□□ -1.17
TUBD1-208ENST00000588009 ZBTB37Q5TC79 503 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 LYPD4Q6UWN0 246 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 PODNQ7Z5L7 613 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 BEND7Q8N7W2 519 aaPredicted RBP7.73□□□□□ -1.17
TUBD1-208ENST00000588009 FAM13CQ8NE31 585 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 PICK1Q9NRD5 415 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 TJP2Q9UDY2 1190 aa7.73□□□□□ -1.17
TUBD1-208ENST00000588009 LOC100996750A0A140TA64 210 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 IQCA1LA6NCM1 817 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 OIP5O43482 229 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 ADCY3O60266 1144 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 NID1P14543 1247 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 POLR2BP30876 1174 aaKnown RBP7.72□□□□□ -1.17
TUBD1-208ENST00000588009 CCNFP41002 786 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 YARSP54577 528 aaKnown RBP7.72□□□□□ -1.17
TUBD1-208ENST00000588009 ID3Q02535 119 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 SLFN12Q8IYM2 578 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 LRRC47Q8N1G4 583 aaKnown RBP7.72□□□□□ -1.17
TUBD1-208ENST00000588009 ZBTB38Q8NAP3 1195 aaPredicted RBP7.72□□□□□ -1.17
TUBD1-208ENST00000588009 TMEM87BQ96K49 555 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 DHRS1Q96LJ7 313 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 KRTAP4-6Q9BYQ5 205 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 PPP1R9AQ9ULJ8 1098 aa7.72□□□□□ -1.17
TUBD1-208ENST00000588009 RGS13O14921 159 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 BCRP11274 1271 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 AMPD3Q01432 767 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 DALRD3Q5D0E6 543 aaKnown RBP7.71□□□□□ -1.18
TUBD1-208ENST00000588009 TMEM67Q5HYA8 995 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 ZC3H12BQ5HYM0 836 aaKnown RBP7.71□□□□□ -1.18
TUBD1-208ENST00000588009 SLC6A19Q695T7 634 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 HID1Q8IV36 788 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 MRPL41Q8IXM3 137 aaKnown RBP7.71□□□□□ -1.18
TUBD1-208ENST00000588009 DTWD1Q8N5C7 304 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 ZNF507Q8TCN5 953 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 UBASH3BQ8TF42 649 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 SLC26A8Q96RN1 970 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 CRIM1Q9NZV1 1036 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 CD2APQ9Y5K6 639 aa7.71□□□□□ -1.18
TUBD1-208ENST00000588009 SHISA8B8ZZ34 492 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 NTF4P34130 210 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 PMS1P54277 932 aaKnown RBP7.7□□□□□ -1.18
TUBD1-208ENST00000588009 BBS9Q3SYG4 887 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 AKAP4Q5JQC9 854 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 GPAT2Q6NUI2 795 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 RNF214Q8ND24 703 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 NEDD1Q8NHV4 660 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 SGSM3Q96HU1 749 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 KIF2CQ99661 725 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 METTL14Q9HCE5 456 aaKnown RBP7.7□□□□□ -1.18
TUBD1-208ENST00000588009 CWC22Q9HCG8 908 aaKnown RBP7.7□□□□□ -1.18
TUBD1-208ENST00000588009 DISC1Q9NRI5 854 aa7.7□□□□□ -1.18
TUBD1-208ENST00000588009 C21orf62-AS1Q17RA5 79 aa7.69□□□□□ -1.18
TUBD1-208ENST00000588009 DUOXA2Q1HG44 320 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms