RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-210ENST00000587429 SMCR8Q8TEV9 937 aaPredicted RBP26.2■■□□□ 1.78
PKN1-210ENST00000587429 YTHDC1Q96MU7 727 aaKnown RBP26.2■■□□□ 1.78
PKN1-210ENST00000587429 SRRDQ9UH36 339 aa26.2■■□□□ 1.78
PKN1-210ENST00000587429 ZBTB21Q9ULJ3 1066 aa26.2■■□□□ 1.78
PKN1-210ENST00000587429 EVX2Q03828 476 aa26.19■■□□□ 1.78
PKN1-210ENST00000587429 MTMR2Q13614 643 aa26.19■■□□□ 1.78
PKN1-210ENST00000587429 SH3D19Q5HYK7 790 aa26.19■■□□□ 1.78
PKN1-210ENST00000587429 LCORLQ8N3X6 602 aa26.19■■□□□ 1.78
PKN1-210ENST00000587429 PCDHB15Q9Y5E8 787 aa26.19■■□□□ 1.78
PKN1-210ENST00000587429 PRMT2P55345 433 aa26.18■■□□□ 1.78
PKN1-210ENST00000587429 BACE1P56817 501 aa26.18■■□□□ 1.78
PKN1-210ENST00000587429 NBPF11Q86T75 865 aa26.18■■□□□ 1.78
PKN1-210ENST00000587429 TTC6Q86TZ1 520 aa26.18■■□□□ 1.78
PKN1-210ENST00000587429 CRNKL1Q9BZJ0 848 aaKnown RBP26.18■■□□□ 1.78
PKN1-210ENST00000587429 SERPINB13Q9UIV8 391 aa26.18■■□□□ 1.78
PKN1-210ENST00000587429 MYH7P12883 1935 aa26.18■■□□□ 1.78
PKN1-210ENST00000587429 NAV1Q8NEY1 1877 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 GH2P01242 217 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 ADD2P35612 726 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 FCGRTP55899 365 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 RRP1P56182 461 aaKnown RBP26.17■■□□□ 1.78
PKN1-210ENST00000587429 TATDN1Q6P1N9 297 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 ANKRD13CQ8N6S4 541 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 SDR42E1Q8WUS8 393 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 EHD4Q9H223 541 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 ARMT1Q9H993 441 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 GINM1Q9NU53 330 aa26.17■■□□□ 1.78
PKN1-210ENST00000587429 DDX60LQ5H9U9 1706 aaKnown RBP26.17■■□□□ 1.78
PKN1-210ENST00000587429 RBBP6Q7Z6E9 1792 aaKnown RBP26.16■■□□□ 1.78
PKN1-210ENST00000587429 EN2P19622 333 aaPredicted RBP26.16■■□□□ 1.78
PKN1-210ENST00000587429 HOXD10P28358 340 aa26.16■■□□□ 1.78
PKN1-210ENST00000587429 ASCC2Q9H1I8 757 aaPredicted RBP26.16■■□□□ 1.78
PKN1-210ENST00000587429 PNMA3Q9UL41 463 aa26.16■■□□□ 1.78
PKN1-210ENST00000587429 GABRQQ9UN88 632 aa26.16■■□□□ 1.78
PKN1-210ENST00000587429 BRCA2P51587 3418 aa26.16■■□□□ 1.78
PKN1-210ENST00000587429 MYPNQ86TC9 1320 aa26.15■■□□□ 1.78
PKN1-210ENST00000587429 POLR3DP05423 398 aaPredicted RBP26.15■■□□□ 1.78
PKN1-210ENST00000587429 PRKCZQ05513 592 aa26.15■■□□□ 1.78
PKN1-210ENST00000587429 MCM9Q9NXL9 1143 aa26.15■■□□□ 1.78
PKN1-210ENST00000587429 BAZ2AQ9UIF9 1905 aaKnown RBP26.14■■□□□ 1.78
PKN1-210ENST00000587429 USP17L10C9JJH3 530 aa26.14■■□□□ 1.78
PKN1-210ENST00000587429 PRKAB2O43741 272 aa26.14■■□□□ 1.78
PKN1-210ENST00000587429 SHMT1P34896 483 aa26.14■■□□□ 1.78
PKN1-210ENST00000587429 CERKLQ49MI3 558 aaPredicted RBP26.14■■□□□ 1.78
PKN1-210ENST00000587429 TSHZ3Q63HK5 1081 aa26.14■■□□□ 1.78
PKN1-210ENST00000587429 RAET1EQ8TD07 263 aa26.14■■□□□ 1.78
PKN1-210ENST00000587429 TMEM106CQ9BVX2 250 aa26.14■■□□□ 1.78
PKN1-210ENST00000587429 DCP1AQ9NPI6 582 aaPredicted RBP26.14■■□□□ 1.78
PKN1-210ENST00000587429 ECHDC1Q9NTX5 307 aa26.14■■□□□ 1.78
PKN1-210ENST00000587429 MBD4O95243 580 aa26.13■■□□□ 1.77
PKN1-210ENST00000587429 CYP2D6P10635 497 aa26.13■■□□□ 1.77
PKN1-210ENST00000587429 PABPC4Q13310 644 aaKnown RBP eCLIP26.13■■□□□ 1.77
PKN1-210ENST00000587429 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.13■■□□□ 1.778e-7■□□□□ 11.1
PKN1-210ENST00000587429 TMOD4Q9NZQ9 345 aa26.13■■□□□ 1.77
PKN1-210ENST00000587429 MKI67P46013 3256 aaKnown RBP26.13■■□□□ 1.77
PKN1-210ENST00000587429 C19orf81C9J6K1 198 aa26.12■■□□□ 1.77
PKN1-210ENST00000587429 GABPAQ06546 454 aa26.12■■□□□ 1.77
PKN1-210ENST00000587429 EMILIN3Q9NT22 766 aa26.12■■□□□ 1.77
PKN1-210ENST00000587429 PEX10O60683 326 aa26.11■■□□□ 1.77
PKN1-210ENST00000587429 GRK4P32298 578 aa26.11■■□□□ 1.77
PKN1-210ENST00000587429 RAB3GAP1Q15042 981 aa26.11■■□□□ 1.77
PKN1-210ENST00000587429 MTFR1Q15390 333 aa26.11■■□□□ 1.77
PKN1-210ENST00000587429 FAM110CQ1W6H9 321 aa26.11■■□□□ 1.77
PKN1-210ENST00000587429 ABCB5Q2M3G0 1257 aa26.11■■□□□ 1.77
PKN1-210ENST00000587429 CRBNQ96SW2 442 aa26.11■■□□□ 1.77
PKN1-210ENST00000587429 P2RX7Q99572 595 aaKnown RBP26.11■■□□□ 1.77
PKN1-210ENST00000587429 HOXA7P31268 230 aaPredicted RBP26.1■■□□□ 1.77
PKN1-210ENST00000587429 GCLCP48506 637 aaPredicted RBP26.1■■□□□ 1.77
PKN1-210ENST00000587429 UBE3CQ15386 1083 aa26.1■■□□□ 1.77
PKN1-210ENST00000587429 SMIM22K7EJ46 135 aa26.09■■□□□ 1.77
PKN1-210ENST00000587429 TNPO2O14787 897 aaKnown RBP26.09■■□□□ 1.77
PKN1-210ENST00000587429 GUCY1A2P33402 732 aa26.09■■□□□ 1.77
PKN1-210ENST00000587429 FLT3LGP49771 235 aa26.09■■□□□ 1.77
PKN1-210ENST00000587429 IRX3P78415 501 aaPredicted RBP26.09■■□□□ 1.77
PKN1-210ENST00000587429 ZYXQ15942 572 aaKnown RBP26.09■■□□□ 1.77
PKN1-210ENST00000587429 ACER1Q8TDN7 264 aa26.09■■□□□ 1.77
PKN1-210ENST00000587429 PUS7LQ9H0K6 701 aaKnown RBP26.09■■□□□ 1.77
PKN1-210ENST00000587429 USP17L2Q6R6M4 530 aa26.08■■□□□ 1.77
PKN1-210ENST00000587429 SLC44A5Q8NCS7 719 aa26.08■■□□□ 1.77
PKN1-210ENST00000587429 DYNLL2Q96FJ2 89 aa26.08■■□□□ 1.77
PKN1-210ENST00000587429 CABP5Q9NP86 173 aa26.08■■□□□ 1.77
PKN1-210ENST00000587429 BIN2Q9UBW5 565 aaPredicted RBP26.07■■□□□ 1.76
PKN1-210ENST00000587429 CYP2D7A0A087X1C5 515 aa26.06■■□□□ 1.76
PKN1-210ENST00000587429 SEPT2Q15019 361 aa26.06■■□□□ 1.76
PKN1-210ENST00000587429 ZSCAN25Q6NSZ9 544 aa26.06■■□□□ 1.76
PKN1-210ENST00000587429 OTUD7AQ8TE49 926 aaPredicted RBP26.06■■□□□ 1.76
PKN1-210ENST00000587429 GPATCH3Q96I76 525 aa26.06■■□□□ 1.76
PKN1-210ENST00000587429 FEZ1Q99689 392 aa26.06■■□□□ 1.76
PKN1-210ENST00000587429 ATP8A2Q9NTI2 1148 aa26.06■■□□□ 1.76
PKN1-210ENST00000587429 MYH8P13535 1937 aa26.06■■□□□ 1.76
PKN1-210ENST00000587429 ADCY3O60266 1144 aa26.05■■□□□ 1.76
PKN1-210ENST00000587429 ELNP15502 786 aa26.05■■□□□ 1.76
PKN1-210ENST00000587429 HERVK_113P62684 666 aa26.05■■□□□ 1.76
PKN1-210ENST00000587429 POTEEQ6S8J3 1075 aa26.05■■□□□ 1.76
PKN1-210ENST00000587429 COA7Q96BR5 231 aa26.05■■□□□ 1.76
PKN1-210ENST00000587429 TXNRD2Q9NNW7 524 aa26.05■■□□□ 1.76
PKN1-210ENST00000587429 SLC4A4Q9Y6R1 1079 aa26.05■■□□□ 1.76
PKN1-210ENST00000587429 USP17L12C9JPN9 530 aa26.04■■□□□ 1.76
PKN1-210ENST00000587429 USP17L21D6R901 530 aa26.04■■□□□ 1.76
PKN1-210ENST00000587429 MPHOSPH10O00566 681 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms