RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 ERVK-9P63128 1117 aa22.27■■□□□ 1.16
CXXC1-210ENST00000587396 ERVK-24P63145 666 aa22.27■■□□□ 1.16
CXXC1-210ENST00000587396 MORN1Q5T089 497 aa22.27■■□□□ 1.16
CXXC1-210ENST00000587396 NEUROD6Q96NK8 337 aa22.27■■□□□ 1.16
CXXC1-210ENST00000587396 WDR18Q9BV38 432 aa22.27■■□□□ 1.16
CXXC1-210ENST00000587396 COPRSQ9NQ92 184 aa22.27■■□□□ 1.16
CXXC1-210ENST00000587396 ZNF521Q96K83 1311 aa22.27■■□□□ 1.16
CXXC1-210ENST00000587396 ZBTB22O15209 634 aa22.26■■□□□ 1.15
CXXC1-210ENST00000587396 PLEKHH3Q7Z736 793 aa22.26■■□□□ 1.15
CXXC1-210ENST00000587396 TRMT44Q8IYL2 757 aaKnown RBP22.26■■□□□ 1.15
CXXC1-210ENST00000587396 DNAH12Q6ZR08 3092 aa22.26■■□□□ 1.15
CXXC1-210ENST00000587396 ATAD5Q96QE3 1844 aa22.25■■□□□ 1.15
CXXC1-210ENST00000587396 LDHCP07864 332 aa22.25■■□□□ 1.15
CXXC1-210ENST00000587396 GSTO1P78417 241 aa22.25■■□□□ 1.15
CXXC1-210ENST00000587396 MVPQ14764 893 aaKnown RBP22.25■■□□□ 1.15
CXXC1-210ENST00000587396 ZNF697Q5TEC3 545 aa22.25■■□□□ 1.15
CXXC1-210ENST00000587396 CDX2Q99626 313 aaPredicted RBP22.25■■□□□ 1.15
CXXC1-210ENST00000587396 APBA2Q99767 749 aa22.25■■□□□ 1.15
CXXC1-210ENST00000587396 DNAJC18Q9H819 358 aa22.25■■□□□ 1.15
CXXC1-210ENST00000587396 FLRT1Q9NZU1 646 aa22.25■■□□□ 1.15
CXXC1-210ENST00000587396 HERC5Q9UII4 1024 aaKnown RBP22.25■■□□□ 1.15
CXXC1-210ENST00000587396 SPTBN5Q9NRC6 3674 aaKnown RBP22.25■■□□□ 1.15
CXXC1-210ENST00000587396 SPATA5Q8NB90 893 aa22.24■■□□□ 1.15
CXXC1-210ENST00000587396 CWC22Q9HCG8 908 aaKnown RBP22.24■■□□□ 1.15
CXXC1-210ENST00000587396 SMC4Q9NTJ3 1288 aa22.24■■□□□ 1.15
CXXC1-210ENST00000587396 PI4KBQ9UBF8 816 aa22.24■■□□□ 1.15
CXXC1-210ENST00000587396 COL2A1P02458 1487 aaPredicted RBP22.23■■□□□ 1.15
CXXC1-210ENST00000587396 USP17L10C9JJH3 530 aa22.23■■□□□ 1.15
CXXC1-210ENST00000587396 ASNSP08243 561 aa22.23■■□□□ 1.15
CXXC1-210ENST00000587396 CNGA1P29973 690 aa22.23■■□□□ 1.15
CXXC1-210ENST00000587396 MAPKAPK5Q8IW41 473 aa22.23■■□□□ 1.15
CXXC1-210ENST00000587396 MEIS3Q99687 375 aa22.23■■□□□ 1.15
CXXC1-210ENST00000587396 EMILIN3Q9NT22 766 aa22.23■■□□□ 1.15
CXXC1-210ENST00000587396 C19orf81C9J6K1 198 aa22.22■■□□□ 1.15
CXXC1-210ENST00000587396 ANP32CO43423 234 aa22.22■■□□□ 1.15
CXXC1-210ENST00000587396 MAP2K5Q13163 448 aa22.22■■□□□ 1.15
CXXC1-210ENST00000587396 ZYXQ15942 572 aaKnown RBP22.22■■□□□ 1.15
CXXC1-210ENST00000587396 WDR78Q5VTH9 848 aa22.22■■□□□ 1.15
CXXC1-210ENST00000587396 MAFAQ8NHW3 353 aaPredicted RBP22.22■■□□□ 1.15
CXXC1-210ENST00000587396 TGFBRAP1Q8WUH2 860 aa22.22■■□□□ 1.15
CXXC1-210ENST00000587396 AATFQ9NY61 560 aaKnown RBP eCLIP22.22■■□□□ 1.159e-7■■□□□ 13
CXXC1-210ENST00000587396 AKAP2Q9Y2D5 859 aa22.22■■□□□ 1.15
CXXC1-210ENST00000587396 MAP4K4O95819 1239 aaPredicted RBP22.21■■□□□ 1.15
CXXC1-210ENST00000587396 RTP1P59025 263 aa22.21■■□□□ 1.15
CXXC1-210ENST00000587396 SHHQ15465 462 aa22.21■■□□□ 1.15
CXXC1-210ENST00000587396 GORABQ5T7V8 394 aa22.21■■□□□ 1.15
CXXC1-210ENST00000587396 EDC3Q96F86 508 aaKnown RBP22.21■■□□□ 1.15
CXXC1-210ENST00000587396 LRP2BPQ9P2M1 347 aa22.21■■□□□ 1.15
CXXC1-210ENST00000587396 PALD1Q9ULE6 856 aa22.21■■□□□ 1.15
CXXC1-210ENST00000587396 PRUNE2Q8WUY3 3088 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 CNMDO75829 334 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 MCAMP43121 646 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 C9orf50Q5SZB4 431 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 MFSD14CQ5VZR4 134 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 CRACR2BQ8N4Y2 399 aaPredicted RBP22.2■■□□□ 1.14
CXXC1-210ENST00000587396 TRIM34Q9BYJ4 488 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 SEMA6BQ9H3T3 888 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 PRKAG2Q9UGJ0 569 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 DDX20Q9UHI6 824 aaKnown RBP22.2■■□□□ 1.14
CXXC1-210ENST00000587396 SAP30BPQ9UHR5 308 aaKnown RBP22.2■■□□□ 1.14
CXXC1-210ENST00000587396 ZBTB21Q9ULJ3 1066 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 NOB1Q9ULX3 412 aaKnown RBP22.2■■□□□ 1.14
CXXC1-210ENST00000587396 ATP11BQ9Y2G3 1177 aa22.2■■□□□ 1.14
CXXC1-210ENST00000587396 SRGAP3O43295 1099 aa22.19■■□□□ 1.14
CXXC1-210ENST00000587396 MYLIPQ8WY64 445 aa22.19■■□□□ 1.14
CXXC1-210ENST00000587396 DHX36Q9H2U1 1008 aaKnown RBP22.19■■□□□ 1.14
CXXC1-210ENST00000587396 SNRKQ9NRH2 765 aa22.19■■□□□ 1.14
CXXC1-210ENST00000587396 SIPA1L1O43166 1804 aa22.18■■□□□ 1.14
CXXC1-210ENST00000587396 CYP2C19P33261 490 aa22.18■■□□□ 1.14
CXXC1-210ENST00000587396 GJC2Q5T442 439 aaPredicted RBP22.18■■□□□ 1.14
CXXC1-210ENST00000587396 TRPV1Q8NER1 839 aa22.18■■□□□ 1.14
CXXC1-210ENST00000587396 NOL10Q9BSC4 688 aaKnown RBP22.18■■□□□ 1.14
CXXC1-210ENST00000587396 PRDM6Q9NQX0 595 aa22.18■■□□□ 1.14
CXXC1-210ENST00000587396 PRDM5Q9NQX1 630 aaPredicted RBP22.18■■□□□ 1.14
CXXC1-210ENST00000587396 FLT1P17948 1338 aa22.17■■□□□ 1.14
CXXC1-210ENST00000587396 E9PSI1 815 aa22.17■■□□□ 1.14
CXXC1-210ENST00000587396 ATP2B2Q01814 1243 aa22.17■■□□□ 1.14
CXXC1-210ENST00000587396 ALDH1L2Q3SY69 923 aa22.17■■□□□ 1.14
CXXC1-210ENST00000587396 ANO1Q5XXA6 986 aa22.17■■□□□ 1.14
CXXC1-210ENST00000587396 ADGRA1Q86SQ6 560 aa22.17■■□□□ 1.14
CXXC1-210ENST00000587396 NPLOC4Q8TAT6 608 aa22.17■■□□□ 1.14
CXXC1-210ENST00000587396 CDH23Q9H251 3354 aa22.17■■□□□ 1.14
CXXC1-210ENST00000587396 GH2P01242 217 aa22.16■■□□□ 1.14
CXXC1-210ENST00000587396 ARID4AP29374 1257 aaPredicted RBP22.16■■□□□ 1.14
CXXC1-210ENST00000587396 NAA16Q6N069 864 aaPredicted RBP22.16■■□□□ 1.14
CXXC1-210ENST00000587396 USP17L2Q6R6M4 530 aa22.16■■□□□ 1.14
CXXC1-210ENST00000587396 FOXP4Q8IVH2 680 aaPredicted RBP22.16■■□□□ 1.14
CXXC1-210ENST00000587396 GTF3C2Q8WUA4 911 aaPredicted RBP22.16■■□□□ 1.14
CXXC1-210ENST00000587396 LPAR1Q92633 364 aa22.16■■□□□ 1.14
CXXC1-210ENST00000587396 TTYH1Q9H313 450 aaPredicted RBP22.16■■□□□ 1.14
CXXC1-210ENST00000587396 DNM1LO00429 736 aa22.15■■□□□ 1.14
CXXC1-210ENST00000587396 MYCNP04198 464 aaPredicted RBP22.15■■□□□ 1.14
CXXC1-210ENST00000587396 PTPREP23469 700 aa22.15■■□□□ 1.14
CXXC1-210ENST00000587396 SLFN5Q08AF3 891 aa22.15■■□□□ 1.14
CXXC1-210ENST00000587396 METTL16Q86W50 562 aaKnown RBP22.15■■□□□ 1.14
CXXC1-210ENST00000587396 BADQ92934 168 aa22.15■■□□□ 1.14
CXXC1-210ENST00000587396 CDCA7LQ96GN5 454 aa22.15■■□□□ 1.14
CXXC1-210ENST00000587396 RABGAP1Q9Y3P9 1069 aa22.15■■□□□ 1.14
CXXC1-210ENST00000587396 SLC15A5A6NIM6 579 aa22.14■■□□□ 1.13
CXXC1-210ENST00000587396 BAG3O95817 575 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms