RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 Q3C1V9 767 aa20.06■□□□□ 0.8
NPC1-205ENST00000587163 POTEEQ6S8J3 1075 aa20.06■□□□□ 0.8
NPC1-205ENST00000587163 ATF7IPQ6VMQ6 1270 aa20.06■□□□□ 0.8
NPC1-205ENST00000587163 FRAT1Q92837 279 aaPredicted RBP20.06■□□□□ 0.8
NPC1-205ENST00000587163 CDK5RAP2Q96SN8 1893 aa20.06■□□□□ 0.8
NPC1-205ENST00000587163 DBNDD2Q9BQY9 259 aa20.06■□□□□ 0.8
NPC1-205ENST00000587163 NBPF3Q9H094 633 aa20.06■□□□□ 0.8
NPC1-205ENST00000587163 TMOD4Q9NZQ9 345 aa20.06■□□□□ 0.8
NPC1-205ENST00000587163 RBPJLQ9UBG7 517 aa20.06■□□□□ 0.8
NPC1-205ENST00000587163 OGDHLQ9ULD0 1010 aa20.06■□□□□ 0.8
NPC1-205ENST00000587163 IPO8O15397 1037 aaKnown RBP20.05■□□□□ 0.8
NPC1-205ENST00000587163 PLCG2P16885 1265 aa20.05■□□□□ 0.8
NPC1-205ENST00000587163 BMP8BP34820 402 aa20.05■□□□□ 0.8
NPC1-205ENST00000587163 HERVK_113P62684 666 aa20.05■□□□□ 0.8
NPC1-205ENST00000587163 TNNI3KQ59H18 835 aa20.05■□□□□ 0.8
NPC1-205ENST00000587163 TTC39AQ5SRH9 613 aa20.05■□□□□ 0.8
NPC1-205ENST00000587163 MAP3K21Q5TCX8 1036 aa20.05■□□□□ 0.8
NPC1-205ENST00000587163 FOXP4Q8IVH2 680 aaPredicted RBP20.05■□□□□ 0.8
NPC1-205ENST00000587163 GPRC5AQ8NFJ5 357 aa20.05■□□□□ 0.8
NPC1-205ENST00000587163 C11orf49Q9H6J7 331 aa20.05■□□□□ 0.8
NPC1-205ENST00000587163 FPGT-TNNI3KV9GXZ4 949 aa20.05■□□□□ 0.8
NPC1-205ENST00000587163 MYO5AQ9Y4I1 1855 aaKnown RBP20.05■□□□□ 0.8
NPC1-205ENST00000587163 DDX60LQ5H9U9 1706 aaKnown RBP20.05■□□□□ 0.8
NPC1-205ENST00000587163 C19orf81C9J6K1 198 aa20.04■□□□□ 0.8
NPC1-205ENST00000587163 USP17L10C9JJH3 530 aa20.04■□□□□ 0.8
NPC1-205ENST00000587163 PRKAR2AP13861 404 aaKnown RBP20.04■□□□□ 0.8
NPC1-205ENST00000587163 SYN1P17600 705 aa20.04■□□□□ 0.8
NPC1-205ENST00000587163 POLA2Q14181 598 aa20.04■□□□□ 0.8
NPC1-205ENST00000587163 CRACR2BQ8N4Y2 399 aaPredicted RBP20.04■□□□□ 0.8
NPC1-205ENST00000587163 SLC17A8Q8NDX2 589 aa20.04■□□□□ 0.8
NPC1-205ENST00000587163 NUDT12Q9BQG2 462 aa20.04■□□□□ 0.8
NPC1-205ENST00000587163 GPR108Q9NPR9 543 aa20.04■□□□□ 0.8
NPC1-205ENST00000587163 SAP30BPQ9UHR5 308 aaKnown RBP20.04■□□□□ 0.8
NPC1-205ENST00000587163 COL6A3P12111 3177 aa20.03■□□□□ 0.8
NPC1-205ENST00000587163 MAST2Q6P0Q8 1798 aa20.03■□□□□ 0.8
NPC1-205ENST00000587163 XRCC5P13010 732 aaKnown RBP20.03■□□□□ 0.8
NPC1-205ENST00000587163 DYNLL1P63167 89 aaKnown RBP20.03■□□□□ 0.8
NPC1-205ENST00000587163 USP6NLQ92738 828 aa20.03■□□□□ 0.8
NPC1-205ENST00000587163 PORCNQ9H237 461 aa20.03■□□□□ 0.8
NPC1-205ENST00000587163 PIH1D3Q9NQM4 214 aaKnown RBP20.03■□□□□ 0.8
NPC1-205ENST00000587163 EMILIN3Q9NT22 766 aa20.03■□□□□ 0.8
NPC1-205ENST00000587163 ZBTB21Q9ULJ3 1066 aa20.03■□□□□ 0.8
NPC1-205ENST00000587163 FOCADQ5VW36 1801 aa20.03■□□□□ 0.8
NPC1-205ENST00000587163 ZAP70P43403 619 aa20.02■□□□□ 0.8
NPC1-205ENST00000587163 CACNB2Q08289 660 aaPredicted RBP20.02■□□□□ 0.8
NPC1-205ENST00000587163 CCDC158Q5M9N0 1113 aa20.02■□□□□ 0.8
NPC1-205ENST00000587163 TMEM57Q8N5G2 664 aa20.02■□□□□ 0.8
NPC1-205ENST00000587163 PFASO15067 1338 aa20.02■□□□□ 0.79
NPC1-205ENST00000587163 MAPK4P31152 587 aa20.01■□□□□ 0.79
NPC1-205ENST00000587163 MAGEA10P43363 369 aaPredicted RBP20.01■□□□□ 0.79
NPC1-205ENST00000587163 ERVK-9P63128 1117 aa20.01■□□□□ 0.79
NPC1-205ENST00000587163 ERVK-24P63145 666 aa20.01■□□□□ 0.79
NPC1-205ENST00000587163 CCL14Q16627 93 aa20.01■□□□□ 0.79
NPC1-205ENST00000587163 SSH3Q8TE77 659 aa20.01■□□□□ 0.79
NPC1-205ENST00000587163 TRIM34Q9BYJ4 488 aa20.01■□□□□ 0.79
NPC1-205ENST00000587163 GINM1Q9NU53 330 aa20.01■□□□□ 0.79
NPC1-205ENST00000587163 ATP8B2P98198 1209 aa20■□□□□ 0.79
NPC1-205ENST00000587163 MORN1Q5T089 497 aa20■□□□□ 0.79
NPC1-205ENST00000587163 LHX8Q68G74 356 aa20■□□□□ 0.79
NPC1-205ENST00000587163 GPR142Q7Z601 462 aa20■□□□□ 0.79
NPC1-205ENST00000587163 SOCS4Q8WXH5 440 aa20■□□□□ 0.79
NPC1-205ENST00000587163 ZNF512BQ96KM6 892 aaPredicted RBP20■□□□□ 0.79
NPC1-205ENST00000587163 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
NPC1-205ENST00000587163 DLL1O00548 723 aa19.99■□□□□ 0.79
NPC1-205ENST00000587163 SURF6O75683 361 aaKnown RBP19.99■□□□□ 0.79
NPC1-205ENST00000587163 GH2P01242 217 aa19.99■□□□□ 0.79
NPC1-205ENST00000587163 ZKSCAN1P17029 563 aaPredicted RBP19.99■□□□□ 0.79
NPC1-205ENST00000587163 CCND3P30281 292 aaPredicted RBP19.99■□□□□ 0.79
NPC1-205ENST00000587163 OS9Q13438 667 aaPredicted RBP19.99■□□□□ 0.79
NPC1-205ENST00000587163 PDE3AQ14432 1141 aa19.99■□□□□ 0.79
NPC1-205ENST00000587163 USP17L2Q6R6M4 530 aa19.99■□□□□ 0.79
NPC1-205ENST00000587163 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
NPC1-205ENST00000587163 DBNLQ9UJU6 430 aaKnown RBP19.99■□□□□ 0.79
NPC1-205ENST00000587163 COL6A1P12109 1028 aa19.98■□□□□ 0.79
NPC1-205ENST00000587163 CYP7A1P22680 504 aa19.98■□□□□ 0.79
NPC1-205ENST00000587163 Q7L0L9 218 aa19.98■□□□□ 0.79
NPC1-205ENST00000587163 PLEKHH3Q7Z736 793 aa19.98■□□□□ 0.79
NPC1-205ENST00000587163 TRMT44Q8IYL2 757 aaKnown RBP19.98■□□□□ 0.79
NPC1-205ENST00000587163 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
NPC1-205ENST00000587163 CNMDO75829 334 aa19.97■□□□□ 0.79
NPC1-205ENST00000587163 HLA-DOAP06340 250 aa19.97■□□□□ 0.79
NPC1-205ENST00000587163 RGS2P41220 211 aa19.97■□□□□ 0.79
NPC1-205ENST00000587163 ZYXQ15942 572 aaKnown RBP19.97■□□□□ 0.79
NPC1-205ENST00000587163 TATDN1Q6P1N9 297 aa19.97■□□□□ 0.79
NPC1-205ENST00000587163 CCAR1Q8IX12 1150 aaKnown RBP19.97■□□□□ 0.79
NPC1-205ENST00000587163 MIGA1Q8NAN2 632 aa19.97■□□□□ 0.79
NPC1-205ENST00000587163 CCDC8Q9H0W5 538 aaPredicted RBP19.97■□□□□ 0.79
NPC1-205ENST00000587163 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
NPC1-205ENST00000587163 LRIT3Q3SXY7 679 aa19.96■□□□□ 0.79
NPC1-205ENST00000587163 GPR153Q6NV75 609 aa19.96■□□□□ 0.79
NPC1-205ENST00000587163 DEFB123Q8N688 67 aa19.96■□□□□ 0.79
NPC1-205ENST00000587163 GTF3C2Q8WUA4 911 aaPredicted RBP19.96■□□□□ 0.79
NPC1-205ENST00000587163 EAF2Q96CJ1 260 aaPredicted RBP19.96■□□□□ 0.79
NPC1-205ENST00000587163 NOP58Q9Y2X3 529 aaKnown RBP19.96■□□□□ 0.79
NPC1-205ENST00000587163 MYH1P12882 1939 aa19.96■□□□□ 0.79
NPC1-205ENST00000587163 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
NPC1-205ENST00000587163 IGSF3O75054 1194 aa19.95■□□□□ 0.78
NPC1-205ENST00000587163 IDH1O75874 414 aaKnown RBP19.95■□□□□ 0.78
NPC1-205ENST00000587163 LRRC26Q2I0M4 334 aa19.95■□□□□ 0.78
NPC1-205ENST00000587163 ZKSCAN2Q63HK3 967 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms