RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 USP17L10C9JJH3 530 aa24.38■■□□□ 1.49
VAT1-203ENST00000587062 GDF11O95390 407 aa24.38■■□□□ 1.49
VAT1-203ENST00000587062 PRMT2P55345 433 aa24.38■■□□□ 1.49
VAT1-203ENST00000587062 LACTBP83111 547 aaPredicted RBP24.38■■□□□ 1.49
VAT1-203ENST00000587062 TATDN1Q6P1N9 297 aa24.38■■□□□ 1.49
VAT1-203ENST00000587062 CCDC84Q86UT8 332 aaPredicted RBP24.38■■□□□ 1.49
VAT1-203ENST00000587062 SDR42E1Q8WUS8 393 aa24.38■■□□□ 1.49
VAT1-203ENST00000587062 DNAJC18Q9H819 358 aa24.38■■□□□ 1.49
VAT1-203ENST00000587062 SWAP70Q9UH65 585 aa24.38■■□□□ 1.49
VAT1-203ENST00000587062 CPA4Q9UI42 421 aa24.38■■□□□ 1.49
VAT1-203ENST00000587062 ZBTB21Q9ULJ3 1066 aa24.38■■□□□ 1.49
VAT1-203ENST00000587062 HMGCS2P54868 508 aa24.37■■□□□ 1.49
VAT1-203ENST00000587062 BACE1P56817 501 aa24.37■■□□□ 1.49
VAT1-203ENST00000587062 SH3D19Q5HYK7 790 aa24.37■■□□□ 1.49
VAT1-203ENST00000587062 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.37■■□□□ 1.49
VAT1-203ENST00000587062 SUPT16HQ9Y5B9 1047 aaKnown RBP24.37■■□□□ 1.49
VAT1-203ENST00000587062 SLC4A4Q9Y6R1 1079 aa24.37■■□□□ 1.49
VAT1-203ENST00000587062 MYH7P12883 1935 aa24.37■■□□□ 1.49
VAT1-203ENST00000587062 RNF113AO15541 343 aaKnown RBP24.36■■□□□ 1.49
VAT1-203ENST00000587062 PLCD1P51178 756 aa24.36■■□□□ 1.49
VAT1-203ENST00000587062 RRP1BQ14684 758 aaKnown RBP24.36■■□□□ 1.49
VAT1-203ENST00000587062 ABCB5Q2M3G0 1257 aa24.36■■□□□ 1.49
VAT1-203ENST00000587062 NBPF11Q86T75 865 aa24.36■■□□□ 1.49
VAT1-203ENST00000587062 APPBP2Q92624 585 aa24.36■■□□□ 1.49
VAT1-203ENST00000587062 PHIPQ8WWQ0 1821 aa24.35■■□□□ 1.49
VAT1-203ENST00000587062 GH2P01242 217 aa24.35■■□□□ 1.49
VAT1-203ENST00000587062 CYP2C8P10632 490 aa24.35■■□□□ 1.49
VAT1-203ENST00000587062 SIPA1L1O43166 1804 aa24.35■■□□□ 1.49
VAT1-203ENST00000587062 NAV1Q8NEY1 1877 aa24.34■■□□□ 1.49
VAT1-203ENST00000587062 FMNL1O95466 1100 aaPredicted RBP24.34■■□□□ 1.49
VAT1-203ENST00000587062 GNAT2P19087 354 aa24.34■■□□□ 1.49
VAT1-203ENST00000587062 MTMR2Q13614 643 aa24.34■■□□□ 1.49
VAT1-203ENST00000587062 RAB3GAP1Q15042 981 aa24.34■■□□□ 1.49
VAT1-203ENST00000587062 TSHZ3Q63HK5 1081 aa24.34■■□□□ 1.49
VAT1-203ENST00000587062 FEZ1Q99689 392 aa24.34■■□□□ 1.49
VAT1-203ENST00000587062 GCLCP48506 637 aaPredicted RBP24.33■■□□□ 1.49
VAT1-203ENST00000587062 USP14P54578 494 aa24.33■■□□□ 1.49
VAT1-203ENST00000587062 FCGRTP55899 365 aa24.33■■□□□ 1.49
VAT1-203ENST00000587062 USP17L2Q6R6M4 530 aa24.33■■□□□ 1.49
VAT1-203ENST00000587062 FSD1Q9BTV5 496 aa24.33■■□□□ 1.49
VAT1-203ENST00000587062 PUS7LQ9H0K6 701 aaKnown RBP24.33■■□□□ 1.49
VAT1-203ENST00000587062 PTPRFP10586 1907 aa24.32■■□□□ 1.48
VAT1-203ENST00000587062 MPHOSPH10O00566 681 aaKnown RBP24.32■■□□□ 1.48
VAT1-203ENST00000587062 PRKAB2O43741 272 aa24.32■■□□□ 1.48
VAT1-203ENST00000587062 PSMC4P43686 418 aa24.32■■□□□ 1.48
VAT1-203ENST00000587062 IRX3P78415 501 aaPredicted RBP24.32■■□□□ 1.48
VAT1-203ENST00000587062 EXOC6Q8TAG9 804 aa24.32■■□□□ 1.48
VAT1-203ENST00000587062 PI4K2BQ8TCG2 481 aa24.32■■□□□ 1.48
VAT1-203ENST00000587062 ARPP21Q9UBL0 812 aaPredicted RBP24.32■■□□□ 1.48
VAT1-203ENST00000587062 BCRP11274 1271 aa24.31■■□□□ 1.48
VAT1-203ENST00000587062 GABPAQ06546 454 aa24.31■■□□□ 1.48
VAT1-203ENST00000587062 SLFNL1Q499Z3 407 aa24.31■■□□□ 1.48
VAT1-203ENST00000587062 TREML2Q5T2D2 321 aa24.31■■□□□ 1.48
VAT1-203ENST00000587062 GIMAP6Q6P9H5 292 aa24.31■■□□□ 1.48
VAT1-203ENST00000587062 CCDC17Q96LX7 622 aa24.31■■□□□ 1.48
VAT1-203ENST00000587062 ADGRA2Q96PE1 1338 aa24.31■■□□□ 1.48
VAT1-203ENST00000587062 USP17L12C9JPN9 530 aa24.3■■□□□ 1.48
VAT1-203ENST00000587062 USP17L21D6R901 530 aa24.3■■□□□ 1.48
VAT1-203ENST00000587062 SHMT1P34896 483 aa24.3■■□□□ 1.48
VAT1-203ENST00000587062 STRBPQ96SI9 672 aaKnown RBP24.3■■□□□ 1.48
VAT1-203ENST00000587062 APPP05067 770 aa24.29■■□□□ 1.48
VAT1-203ENST00000587062 HOXA7P31268 230 aaPredicted RBP24.29■■□□□ 1.48
VAT1-203ENST00000587062 RGS19P49795 217 aa24.29■■□□□ 1.48
VAT1-203ENST00000587062 MLLT1Q03111 559 aaPredicted RBP24.29■■□□□ 1.48
VAT1-203ENST00000587062 SLC9C1Q4G0N8 1177 aa24.29■■□□□ 1.48
VAT1-203ENST00000587062 C12orf60Q5U649 245 aa24.29■■□□□ 1.48
VAT1-203ENST00000587062 SMC5Q8IY18 1101 aa24.29■■□□□ 1.48
VAT1-203ENST00000587062 GTF3C2Q8WUA4 911 aaPredicted RBP24.29■■□□□ 1.48
VAT1-203ENST00000587062 EVI5LQ96CN4 794 aa24.29■■□□□ 1.48
VAT1-203ENST00000587062 NACAP1Q9BZK3 213 aa24.29■■□□□ 1.48
VAT1-203ENST00000587062 ZNF287Q9HBT7 754 aa24.29■■□□□ 1.48
VAT1-203ENST00000587062 STAP2Q9UGK3 403 aa24.29■■□□□ 1.48
VAT1-203ENST00000587062 JAG1P78504 1218 aa24.28■■□□□ 1.48
VAT1-203ENST00000587062 TMEM179Q6ZVK1 233 aa24.28■■□□□ 1.48
VAT1-203ENST00000587062 TICAM2Q86XR7 235 aa24.28■■□□□ 1.48
VAT1-203ENST00000587062 OTUD7AQ8TE49 926 aaPredicted RBP24.28■■□□□ 1.48
VAT1-203ENST00000587062 ASCC2Q9H1I8 757 aaPredicted RBP24.28■■□□□ 1.48
VAT1-203ENST00000587062 GPAA1O43292 621 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 PDE1AP54750 535 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 FAM110CQ1W6H9 321 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 B4GALNT3Q6L9W6 998 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 RAET1EQ8TD07 263 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 OSBP2Q969R2 916 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 ARHGAP39Q9C0H5 1083 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 KIAA1683Q9H0B3 1180 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 SH2D4AQ9H788 454 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 SRRDQ9UH36 339 aa24.27■■□□□ 1.48
VAT1-203ENST00000587062 DDX60LQ5H9U9 1706 aaKnown RBP24.27■■□□□ 1.48
VAT1-203ENST00000587062 LOC285556D6RIA3 1793 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 ECM2O94769 699 aaPredicted RBP24.26■■□□□ 1.47
VAT1-203ENST00000587062 TDO2P48775 406 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 SOX10P56693 466 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 SBK1Q52WX2 424 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 CTR9Q6PD62 1173 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 ANKRD13CQ8N6S4 541 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 COA7Q96BR5 231 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 TMEM106CQ9BVX2 250 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 LNPKQ9C0E8 428 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 ARHGEF10LQ9HCE6 1279 aa24.26■■□□□ 1.47
VAT1-203ENST00000587062 PTCH2Q9Y6C5 1203 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms