RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 BACE1P56817 501 aa20.58■□□□□ 0.89
TRIM47-203ENST00000586495 PRKCZQ05513 592 aa20.58■□□□□ 0.89
TRIM47-203ENST00000586495 FAM110CQ1W6H9 321 aa20.58■□□□□ 0.89
TRIM47-203ENST00000586495 EHD4Q9H223 541 aa20.58■□□□□ 0.89
TRIM47-203ENST00000586495 BIN2Q9UBW5 565 aaPredicted RBP20.58■□□□□ 0.89
TRIM47-203ENST00000586495 SERPINB13Q9UIV8 391 aa20.58■□□□□ 0.89
TRIM47-203ENST00000586495 ZBTB21Q9ULJ3 1066 aa20.58■□□□□ 0.89
TRIM47-203ENST00000586495 USP17L10C9JJH3 530 aa20.57■□□□□ 0.88
TRIM47-203ENST00000586495 PDE6AP16499 860 aa20.57■□□□□ 0.88
TRIM47-203ENST00000586495 UBXN2AP68543 259 aa20.57■□□□□ 0.88
TRIM47-203ENST00000586495 MTMR2Q13614 643 aa20.57■□□□□ 0.88
TRIM47-203ENST00000586495 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
TRIM47-203ENST00000586495 SLAIN1Q8ND83 568 aa20.57■□□□□ 0.88
TRIM47-203ENST00000586495 RIOK1Q9BRS2 568 aaKnown RBP20.57■□□□□ 0.88
TRIM47-203ENST00000586495 IRX3P78415 501 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-203ENST00000586495 JAG1P78504 1218 aa20.56■□□□□ 0.88
TRIM47-203ENST00000586495 TATDN1Q6P1N9 297 aa20.56■□□□□ 0.88
TRIM47-203ENST00000586495 NKX2-3Q8TAU0 364 aa20.56■□□□□ 0.88
TRIM47-203ENST00000586495 COA7Q96BR5 231 aa20.56■□□□□ 0.88
TRIM47-203ENST00000586495 CRNKL1Q9BZJ0 848 aaKnown RBP20.56■□□□□ 0.88
TRIM47-203ENST00000586495 ASCC2Q9H1I8 757 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-203ENST00000586495 GABRQQ9UN88 632 aa20.56■□□□□ 0.88
TRIM47-203ENST00000586495 MYH1P12882 1939 aa20.56■□□□□ 0.88
TRIM47-203ENST00000586495 LOC285556D6RIA3 1793 aa20.56■□□□□ 0.88
TRIM47-203ENST00000586495 ZNF532Q9HCE3 1301 aa20.55■□□□□ 0.88
TRIM47-203ENST00000586495 POLR3DP05423 398 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-203ENST00000586495 ATP5JP18859 108 aa20.55■□□□□ 0.88
TRIM47-203ENST00000586495 HOXA7P31268 230 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-203ENST00000586495 FLT3LGP49771 235 aa20.55■□□□□ 0.88
TRIM47-203ENST00000586495 LRRCC1Q9C099 1032 aa20.55■□□□□ 0.88
TRIM47-203ENST00000586495 BOLA2Q9H3K6 86 aa20.55■□□□□ 0.88
TRIM47-203ENST00000586495 MGAMO43451 1857 aa20.55■□□□□ 0.88
TRIM47-203ENST00000586495 ADCY3O60266 1144 aa20.54■□□□□ 0.88
TRIM47-203ENST00000586495 GH2P01242 217 aa20.54■□□□□ 0.88
TRIM47-203ENST00000586495 IRF5Q13568 498 aa20.54■□□□□ 0.88
TRIM47-203ENST00000586495 MTFR1Q15390 333 aa20.54■□□□□ 0.88
TRIM47-203ENST00000586495 CABP5Q9NP86 173 aa20.54■□□□□ 0.88
TRIM47-203ENST00000586495 PAG1Q9NWQ8 432 aa20.54■□□□□ 0.88
TRIM47-203ENST00000586495 CENPFP49454 3210 aa20.54■□□□□ 0.88
TRIM47-203ENST00000586495 CERKLQ49MI3 558 aaPredicted RBP20.53■□□□□ 0.88
TRIM47-203ENST00000586495 USP17L2Q6R6M4 530 aa20.53■□□□□ 0.88
TRIM47-203ENST00000586495 PXYLP1Q8TE99 480 aa20.53■□□□□ 0.88
TRIM47-203ENST00000586495 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.53■□□□□ 0.88
TRIM47-203ENST00000586495 TCRBV5S4A2TA0A5A2 114 aa20.52■□□□□ 0.88
TRIM47-203ENST00000586495 ABCB5Q2M3G0 1257 aa20.52■□□□□ 0.88
TRIM47-203ENST00000586495 SHROOM1Q2M3G4 852 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-203ENST00000586495 EDC3Q96F86 508 aaKnown RBP20.52■□□□□ 0.88
TRIM47-203ENST00000586495 HAUS7Q99871 368 aa20.52■□□□□ 0.88
TRIM47-203ENST00000586495 RNF208Q9H0X6 261 aa20.52■□□□□ 0.88
TRIM47-203ENST00000586495 MCM9Q9NXL9 1143 aa20.52■□□□□ 0.88
TRIM47-203ENST00000586495 GJB1P08034 283 aa20.51■□□□□ 0.87
TRIM47-203ENST00000586495 CCL5P13501 91 aa20.51■□□□□ 0.87
TRIM47-203ENST00000586495 ADD2P35612 726 aa20.51■□□□□ 0.87
TRIM47-203ENST00000586495 PLCD1P51178 756 aa20.51■□□□□ 0.87
TRIM47-203ENST00000586495 GTF3C2Q8WUA4 911 aaPredicted RBP20.51■□□□□ 0.87
TRIM47-203ENST00000586495 FEZ1Q99689 392 aa20.51■□□□□ 0.87
TRIM47-203ENST00000586495 MORF4L1Q9UBU8 362 aa20.51■□□□□ 0.87
TRIM47-203ENST00000586495 USP14P54578 494 aa20.5■□□□□ 0.87
TRIM47-203ENST00000586495 RAB3GAP1Q15042 981 aa20.5■□□□□ 0.87
TRIM47-203ENST00000586495 P2RX7Q99572 595 aaKnown RBP20.5■□□□□ 0.87
TRIM47-203ENST00000586495 EMILIN3Q9NT22 766 aa20.5■□□□□ 0.87
TRIM47-203ENST00000586495 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
TRIM47-203ENST00000586495 GJA8P48165 433 aa20.49■□□□□ 0.87
TRIM47-203ENST00000586495 HERVK_113P62684 666 aa20.49■□□□□ 0.87
TRIM47-203ENST00000586495 ZSCAN25Q6NSZ9 544 aa20.49■□□□□ 0.87
TRIM47-203ENST00000586495 LCORLQ8N3X6 602 aa20.49■□□□□ 0.87
TRIM47-203ENST00000586495 SDR42E1Q8WUS8 393 aa20.49■□□□□ 0.87
TRIM47-203ENST00000586495 GCC1Q96CN9 775 aa20.49■□□□□ 0.87
TRIM47-203ENST00000586495 C12orf42Q96LP6 360 aa20.49■□□□□ 0.87
TRIM47-203ENST00000586495 DCP1AQ9NPI6 582 aaPredicted RBP20.49■□□□□ 0.87
TRIM47-203ENST00000586495 SMARCA5O60264 1052 aaPredicted RBP20.48■□□□□ 0.87
TRIM47-203ENST00000586495 ELNP15502 786 aa20.48■□□□□ 0.87
TRIM47-203ENST00000586495 SHMT1P34896 483 aa20.48■□□□□ 0.87
TRIM47-203ENST00000586495 GABPAQ06546 454 aa20.48■□□□□ 0.87
TRIM47-203ENST00000586495 UBE3CQ15386 1083 aa20.48■□□□□ 0.87
TRIM47-203ENST00000586495 GPRC5AQ8NFJ5 357 aa20.48■□□□□ 0.87
TRIM47-203ENST00000586495 DCTPP1Q9H773 170 aa20.48■□□□□ 0.87
TRIM47-203ENST00000586495 ARMT1Q9H993 441 aa20.48■□□□□ 0.87
TRIM47-203ENST00000586495 ATP8A2Q9NTI2 1148 aa20.48■□□□□ 0.87
TRIM47-203ENST00000586495 SLC34A2O95436 690 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 INHAP05111 366 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 CAPN2P17655 700 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 ZYXQ15942 572 aaKnown RBP20.47■□□□□ 0.87
TRIM47-203ENST00000586495 DDRGK1Q96HY6 314 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 GPATCH3Q96I76 525 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 KIAA1683Q9H0B3 1180 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 UNC93B1Q9H1C4 597 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 ECHDC1Q9NTX5 307 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 SWAP70Q9UH65 585 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 DOCK3Q8IZD9 2030 aa20.47■□□□□ 0.87
TRIM47-203ENST00000586495 USP17L15C9J2P7 530 aa20.46■□□□□ 0.87
TRIM47-203ENST00000586495 USP17L13C9JLJ4 530 aa20.46■□□□□ 0.87
TRIM47-203ENST00000586495 USP17L11C9JVI0 530 aa20.46■□□□□ 0.87
TRIM47-203ENST00000586495 USP17L18D6R9N7 530 aa20.46■□□□□ 0.87
TRIM47-203ENST00000586495 USP17L22D6RA61 530 aa20.46■□□□□ 0.87
TRIM47-203ENST00000586495 USP17L17D6RBQ6 530 aa20.46■□□□□ 0.87
TRIM47-203ENST00000586495 USP17L19D6RCP7 530 aa20.46■□□□□ 0.87
TRIM47-203ENST00000586495 USP17L20D6RJB6 530 aa20.46■□□□□ 0.87
TRIM47-203ENST00000586495 MBD4O95243 580 aa20.46■□□□□ 0.87
TRIM47-203ENST00000586495 USP17L24Q0WX57 530 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms