RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZNF70Q9UC06 446 aaPredicted RBP23.94■■□□□ 1.42
ATG4D-204ENST00000586417 VPS37CA5D8V6 355 aaPredicted RBP23.93■■□□□ 1.42
ATG4D-204ENST00000586417 HMGN5P82970 282 aaKnown RBP23.93■■□□□ 1.42
ATG4D-204ENST00000586417 ESR2Q92731 530 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 DDX11Q96FC9 970 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 LMBRD1Q9NUN5 540 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 SCAF8Q9UPN6 1271 aaKnown RBP23.93■■□□□ 1.42
ATG4D-204ENST00000586417 FLT1P17948 1338 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 SLC4A8Q2Y0W8 1093 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 SPDYE2Q495Y8 402 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 CDC37L1Q7L3B6 337 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 RAB11FIP4Q86YS3 637 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 ZFPM1Q8IX07 1006 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 MCM9Q9NXL9 1143 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 FAM198AQ9UFP1 575 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 MYH1P12882 1939 aa23.93■■□□□ 1.42
ATG4D-204ENST00000586417 ORC4O43929 436 aa23.92■■□□□ 1.42
ATG4D-204ENST00000586417 C12orf60Q5U649 245 aa23.92■■□□□ 1.42
ATG4D-204ENST00000586417 SAP30BPQ9UHR5 308 aaKnown RBP23.92■■□□□ 1.42
ATG4D-204ENST00000586417 WDR90Q96KV7 1748 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 TCP10Q12799 353 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 ZKSCAN3Q9BRR0 538 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 VEZTQ9HBM0 779 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 ADARB2Q9NS39 739 aaKnown RBP23.91■■□□□ 1.42
ATG4D-204ENST00000586417 HACL1Q9UJ83 578 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 ROBO3Q96MS0 1386 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 SCN4AP35499 1836 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 TCP10L2B9ZVM9 353 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 DHX16O60231 1041 aaKnown RBP23.91■■□□□ 1.42
ATG4D-204ENST00000586417 PRDM1O75626 825 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 SART3Q15020 963 aaKnown RBP23.91■■□□□ 1.42
ATG4D-204ENST00000586417 IDI2Q9BXS1 227 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 NID2Q14112 1375 aa23.91■■□□□ 1.42
ATG4D-204ENST00000586417 MYO1BO43795 1136 aa23.9■■□□□ 1.42
ATG4D-204ENST00000586417 FDPSP14324 419 aaKnown RBP23.9■■□□□ 1.42
ATG4D-204ENST00000586417 SEC23AQ15436 765 aa23.9■■□□□ 1.42
ATG4D-204ENST00000586417 FAM184AQ8NB25 1140 aa23.9■■□□□ 1.42
ATG4D-204ENST00000586417 POLR2AP24928 1970 aaKnown RBP23.9■■□□□ 1.42
ATG4D-204ENST00000586417 ZBTB43O43298 467 aa23.89■■□□□ 1.42
ATG4D-204ENST00000586417 METAP2P50579 478 aaKnown RBP eCLIP23.89■■□□□ 1.42
ATG4D-204ENST00000586417 WTAPQ15007 396 aa23.89■■□□□ 1.42
ATG4D-204ENST00000586417 SKOR2Q2VWA4 1001 aaPredicted RBP23.89■■□□□ 1.42
ATG4D-204ENST00000586417 NFXL1Q6ZNB6 911 aa23.89■■□□□ 1.42
ATG4D-204ENST00000586417 SLC3A2P08195 630 aaKnown RBP23.88■■□□□ 1.41
ATG4D-204ENST00000586417 EPHX2P34913 555 aa23.88■■□□□ 1.41
ATG4D-204ENST00000586417 FOXD4L6Q3SYB3 417 aaPredicted RBP23.88■■□□□ 1.41
ATG4D-204ENST00000586417 FOXD4L3Q6VB84 417 aaPredicted RBP23.88■■□□□ 1.41
ATG4D-204ENST00000586417 UBAC1Q9BSL1 405 aa23.88■■□□□ 1.41
ATG4D-204ENST00000586417 OSBPL5Q9H0X9 879 aaPredicted RBP23.88■■□□□ 1.41
ATG4D-204ENST00000586417 TNKSO95271 1327 aa23.88■■□□□ 1.41
ATG4D-204ENST00000586417 RXRAP19793 462 aa23.88■■□□□ 1.41
ATG4D-204ENST00000586417 MICU3Q86XE3 530 aa23.88■■□□□ 1.41
ATG4D-204ENST00000586417 FAM217BQ9NTX9 383 aaPredicted RBP23.88■■□□□ 1.41
ATG4D-204ENST00000586417 TMOD2Q9NZR1 351 aa23.88■■□□□ 1.41
ATG4D-204ENST00000586417 ATP6V1DQ9Y5K8 247 aa23.88■■□□□ 1.41
ATG4D-204ENST00000586417 SLC12A7Q9Y666 1083 aa23.88■■□□□ 1.41
ATG4D-204ENST00000586417 TCHHQ07283 1943 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 CNTNAP1P78357 1384 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 ERICH2A1L162 156 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 CCDC69A6NI79 296 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 RANBP6O60518 1105 aaKnown RBP23.87■■□□□ 1.41
ATG4D-204ENST00000586417 PPFIA3O75145 1194 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 PRPF40AO75400 957 aaKnown RBP23.87■■□□□ 1.41
ATG4D-204ENST00000586417 CDC27P30260 824 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 PLCD1P51178 756 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 ANGEL2Q5VTE6 544 aaKnown RBP23.87■■□□□ 1.41
ATG4D-204ENST00000586417 TMTC2Q8N394 836 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 ZNF526Q8TF50 670 aaPredicted RBP23.87■■□□□ 1.41
ATG4D-204ENST00000586417 ZSCAN10Q96SZ4 725 aaPredicted RBP23.87■■□□□ 1.41
ATG4D-204ENST00000586417 MYL10Q9BUA6 226 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 TAF1DQ9H5J8 278 aaPredicted RBP23.87■■□□□ 1.41
ATG4D-204ENST00000586417 KIF3AQ9Y496 699 aa23.87■■□□□ 1.41
ATG4D-204ENST00000586417 ADD1P35611 737 aaKnown RBP23.86■■□□□ 1.41
ATG4D-204ENST00000586417 SH3BP5LQ7L8J4 393 aa23.86■■□□□ 1.41
ATG4D-204ENST00000586417 ENAHQ8N8S7 591 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-204ENST00000586417 GOLGA8AA7E2F4 631 aa23.86■■□□□ 1.41
ATG4D-204ENST00000586417 CPLX1O14810 134 aa23.86■■□□□ 1.41
ATG4D-204ENST00000586417 PDE4BQ07343 736 aa23.86■■□□□ 1.41
ATG4D-204ENST00000586417 FERMT3Q86UX7 667 aa23.86■■□□□ 1.41
ATG4D-204ENST00000586417 RRAGCQ9HB90 399 aa23.86■■□□□ 1.41
ATG4D-204ENST00000586417 GGA3Q9NZ52 723 aa23.86■■□□□ 1.41
ATG4D-204ENST00000586417 IQCA1LA6NCM1 817 aa23.85■■□□□ 1.41
ATG4D-204ENST00000586417 DDTLA6NHG4 134 aaPredicted RBP23.85■■□□□ 1.41
ATG4D-204ENST00000586417 RCAN1P53805 252 aa23.85■■□□□ 1.41
ATG4D-204ENST00000586417 NTRK3Q16288 839 aa23.85■■□□□ 1.41
ATG4D-204ENST00000586417 CDAN1Q8IWY9 1227 aa23.85■■□□□ 1.41
ATG4D-204ENST00000586417 TMEM87AQ8NBN3 555 aa23.85■■□□□ 1.41
ATG4D-204ENST00000586417 ENTPD3O75355 529 aa23.84■■□□□ 1.41
ATG4D-204ENST00000586417 NPM3O75607 178 aaKnown RBP23.84■■□□□ 1.41
ATG4D-204ENST00000586417 POLR3DP05423 398 aaPredicted RBP23.84■■□□□ 1.41
ATG4D-204ENST00000586417 SLURP2P0DP57 97 aa23.84■■□□□ 1.41
ATG4D-204ENST00000586417 GSE1Q14687 1217 aa23.84■■□□□ 1.41
ATG4D-204ENST00000586417 KLHL40Q2TBA0 621 aa23.84■■□□□ 1.41
ATG4D-204ENST00000586417 FKBP1CQ5VVH2 108 aa23.84■■□□□ 1.41
ATG4D-204ENST00000586417 IQCA1Q86XH1 822 aa23.84■■□□□ 1.41
ATG4D-204ENST00000586417 DYNLL2Q96FJ2 89 aa23.84■■□□□ 1.41
ATG4D-204ENST00000586417 TMEM39BQ9GZU3 492 aa23.84■■□□□ 1.41
ATG4D-204ENST00000586417 CNPY2Q9Y2B0 182 aa23.84■■□□□ 1.41
ATG4D-204ENST00000586417 NT5C2P49902 561 aa23.83■■□□□ 1.41
ATG4D-204ENST00000586417 RESTQ13127 1097 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms